RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 RANBP9Q96S59 729 aa21.19■□□□□ 0.98
TM9SF3-201ENST00000371142 SLC7A11Q9UPY5 501 aa21.19■□□□□ 0.98
TM9SF3-201ENST00000371142 TUBG1P23258 451 aa21.19■□□□□ 0.98
TM9SF3-201ENST00000371142 TMPRSS12Q86WS5 348 aa21.19■□□□□ 0.98
TM9SF3-201ENST00000371142 SLC25A44Q96H78 314 aaPredicted RBP21.19■□□□□ 0.98
TM9SF3-201ENST00000371142 MVB12BQ9H7P6 319 aa21.19■□□□□ 0.98
TM9SF3-201ENST00000371142 KCNN3Q9UGI6 736 aa21.19■□□□□ 0.98
TM9SF3-201ENST00000371142 SLC26A5P58743 744 aa21.18■□□□□ 0.98
TM9SF3-201ENST00000371142 TBRG1Q3YBR2 411 aa21.18■□□□□ 0.98
TM9SF3-201ENST00000371142 CDHR3Q6ZTQ4 885 aa21.18■□□□□ 0.98
TM9SF3-201ENST00000371142 KLBQ86Z14 1044 aa21.18■□□□□ 0.98
TM9SF3-201ENST00000371142 HUS1BQ8NHY5 278 aa21.18■□□□□ 0.98
TM9SF3-201ENST00000371142 ZNF689Q96CS4 500 aaPredicted RBP21.18■□□□□ 0.98
TM9SF3-201ENST00000371142 PARP4Q9UKK3 1724 aaKnown RBP21.18■□□□□ 0.98
TM9SF3-201ENST00000371142 GPR143P51810 404 aa21.18■□□□□ 0.98
TM9SF3-201ENST00000371142 TCEAL3Q969E4 200 aa21.18■□□□□ 0.98
TM9SF3-201ENST00000371142 PGAM5Q96HS1 289 aa21.18■□□□□ 0.98
TM9SF3-201ENST00000371142 RDH12Q96NR8 316 aa21.18■□□□□ 0.98
TM9SF3-201ENST00000371142 ADAMTS6Q9UKP5 1117 aa21.18■□□□□ 0.98
TM9SF3-201ENST00000371142 MRPL49Q13405 166 aaKnown RBP21.18■□□□□ 0.98
TM9SF3-201ENST00000371142 TSPEARQ8WU66 669 aa21.18■□□□□ 0.98
TM9SF3-201ENST00000371142 PHOX2BQ99453 314 aa21.18■□□□□ 0.98
TM9SF3-201ENST00000371142 SFXN1Q9H9B4 322 aa21.18■□□□□ 0.98
TM9SF3-201ENST00000371142 RBBP9O75884 186 aa21.18■□□□□ 0.98
TM9SF3-201ENST00000371142 C6P13671 934 aa21.18■□□□□ 0.98
TM9SF3-201ENST00000371142 FAM69BQ5VUD6 431 aa21.18■□□□□ 0.98
TM9SF3-201ENST00000371142 OR8K5Q8NH50 307 aa21.18■□□□□ 0.98
TM9SF3-201ENST00000371142 STRA6Q9BX79 667 aa21.18■□□□□ 0.98
TM9SF3-201ENST00000371142 ADAMTS10Q9H324 1103 aa21.18■□□□□ 0.98
TM9SF3-201ENST00000371142 SLCO3A1Q9UIG8 710 aa21.18■□□□□ 0.98
TM9SF3-201ENST00000371142 CLCA1A8K7I4 914 aa21.18■□□□□ 0.98
TM9SF3-201ENST00000371142 DUX1O43812 170 aa21.18■□□□□ 0.98
TM9SF3-201ENST00000371142 TFPTP0C1Z6 253 aa21.18■□□□□ 0.98
TM9SF3-201ENST00000371142 DCKP27707 260 aa21.18■□□□□ 0.98
TM9SF3-201ENST00000371142 DPP6P42658 865 aa21.18■□□□□ 0.98
TM9SF3-201ENST00000371142 RPS15AP62244 130 aaKnown RBP21.18■□□□□ 0.98
TM9SF3-201ENST00000371142 NLGN4XQ8N0W4 816 aa21.18■□□□□ 0.98
TM9SF3-201ENST00000371142 C7orf43Q8WVR3 580 aa21.18■□□□□ 0.98
TM9SF3-201ENST00000371142 CREB3L1Q96BA8 519 aa21.18■□□□□ 0.98
TM9SF3-201ENST00000371142 BORCS6Q96GS4 357 aa21.18■□□□□ 0.98
TM9SF3-201ENST00000371142 FN3KQ9H479 309 aa21.18■□□□□ 0.98
TM9SF3-201ENST00000371142 CCM2LQ9NUG4 571 aaPredicted RBP21.18■□□□□ 0.98
TM9SF3-201ENST00000371142 OR1A2Q9Y585 309 aa21.18■□□□□ 0.98
TM9SF3-201ENST00000371142 ANHXE9PGG2 379 aa21.17■□□□□ 0.98
TM9SF3-201ENST00000371142 RP2O75695 350 aa21.17■□□□□ 0.98
TM9SF3-201ENST00000371142 CDNFQ49AH0 187 aa21.17■□□□□ 0.98
TM9SF3-201ENST00000371142 C10orf62Q5T681 223 aaPredicted RBP21.17■□□□□ 0.98
TM9SF3-201ENST00000371142 TMEM151AQ8N4L1 468 aa21.17■□□□□ 0.98
TM9SF3-201ENST00000371142 MMP27Q9H306 513 aa21.17■□□□□ 0.98
TM9SF3-201ENST00000371142 SPATA6Q9NWH7 488 aaPredicted RBP21.17■□□□□ 0.98
TM9SF3-201ENST00000371142 FTSJ1Q9UET6 329 aa21.17■□□□□ 0.98
TM9SF3-201ENST00000371142 CA14Q9ULX7 337 aa21.17■□□□□ 0.98
TM9SF3-201ENST00000371142 SCAMP2O15127 329 aaKnown RBP21.17■□□□□ 0.98
TM9SF3-201ENST00000371142 KDELR2P33947 212 aa21.17■□□□□ 0.98
TM9SF3-201ENST00000371142 ECH1Q13011 328 aa21.17■□□□□ 0.98
TM9SF3-201ENST00000371142 C6orf141Q5SZD1 244 aa21.17■□□□□ 0.98
TM9SF3-201ENST00000371142 LRIG1Q96JA1 1093 aa21.17■□□□□ 0.98
TM9SF3-201ENST00000371142 TIMM8BQ9Y5J9 83 aaPredicted RBP21.17■□□□□ 0.98
TM9SF3-201ENST00000371142 M0R233 179 aa21.17■□□□□ 0.98
TM9SF3-201ENST00000371142 OR2B3O76000 313 aa21.17■□□□□ 0.98
TM9SF3-201ENST00000371142 ZNF35P13682 527 aa21.17■□□□□ 0.98
TM9SF3-201ENST00000371142 HRH2P25021 359 aa21.17■□□□□ 0.98
TM9SF3-201ENST00000371142 ENPP6Q6UWR7 440 aa21.17■□□□□ 0.98
TM9SF3-201ENST00000371142 HS3ST5Q8IZT8 346 aa21.17■□□□□ 0.98
TM9SF3-201ENST00000371142 ZFP41Q8N8Y5 198 aa21.17■□□□□ 0.98
TM9SF3-201ENST00000371142 OR52B6Q8NGF0 335 aa21.17■□□□□ 0.98
TM9SF3-201ENST00000371142 APOBEC3BQ9UH17 382 aaKnown RBP21.17■□□□□ 0.98
TM9SF3-201ENST00000371142 TRBV2A0A0J9YWF9 115 aa21.17■□□□□ 0.98
TM9SF3-201ENST00000371142 RHEBQ15382 184 aa21.17■□□□□ 0.98
TM9SF3-201ENST00000371142 TRAM1Q15629 374 aa21.17■□□□□ 0.98
TM9SF3-201ENST00000371142 PIGGQ5H8A4 983 aa21.17■□□□□ 0.98
TM9SF3-201ENST00000371142 IER5LQ5T953 404 aa21.17■□□□□ 0.98
TM9SF3-201ENST00000371142 TMEM130Q8N3G9 435 aa21.17■□□□□ 0.98
TM9SF3-201ENST00000371142 RXFP3Q9NSD7 469 aa21.17■□□□□ 0.98
TM9SF3-201ENST00000371142 PAK1IP1Q9NWT1 392 aaPredicted RBP21.17■□□□□ 0.98
TM9SF3-201ENST00000371142 MRPL15Q9P015 296 aaKnown RBP21.17■□□□□ 0.98
TM9SF3-201ENST00000371142 COL1A1P02452 1464 aaPredicted RBP21.17■□□□□ 0.98
TM9SF3-201ENST00000371142 STSP08842 583 aa21.17■□□□□ 0.98
TM9SF3-201ENST00000371142 PRSS56P0CW18 603 aa21.17■□□□□ 0.98
TM9SF3-201ENST00000371142 FRKP42685 505 aaPredicted RBP21.17■□□□□ 0.98
TM9SF3-201ENST00000371142 USP53Q70EK8 1073 aa21.17■□□□□ 0.98
TM9SF3-201ENST00000371142 ZC3H3Q8IXZ2 948 aaKnown RBP21.17■□□□□ 0.98
TM9SF3-201ENST00000371142 DAZLQ92904 295 aaKnown RBP21.17■□□□□ 0.98
TM9SF3-201ENST00000371142 RNF38Q9H0F5 515 aa21.17■□□□□ 0.98
TM9SF3-201ENST00000371142 RFPL2O75678 378 aa21.16■□□□□ 0.98
TM9SF3-201ENST00000371142 PYCR1P32322 319 aa21.16■□□□□ 0.98
TM9SF3-201ENST00000371142 ACTC1P68032 377 aa21.16■□□□□ 0.98
TM9SF3-201ENST00000371142 ACTA1P68133 377 aa21.16■□□□□ 0.98
TM9SF3-201ENST00000371142 ZNF45Q02386 682 aa21.16■□□□□ 0.98
TM9SF3-201ENST00000371142 TMPPEQ6ZT21 453 aa21.16■□□□□ 0.98
TM9SF3-201ENST00000371142 ZBTB20Q9HC78 741 aaPredicted RBP21.16■□□□□ 0.98
TM9SF3-201ENST00000371142 LIPT1Q9Y234 373 aa21.16■□□□□ 0.98
TM9SF3-201ENST00000371142 CIB4A0PJX0 185 aa21.16■□□□□ 0.98
TM9SF3-201ENST00000371142 SSX5O60225 188 aa21.16■□□□□ 0.98
TM9SF3-201ENST00000371142 FDXRP22570 491 aa21.16■□□□□ 0.98
TM9SF3-201ENST00000371142 CRISP1P54107 249 aa21.16■□□□□ 0.98
TM9SF3-201ENST00000371142 DHCR24Q15392 516 aa21.16■□□□□ 0.98
TM9SF3-201ENST00000371142 RPL13AP3Q6NVV1 102 aa21.16■□□□□ 0.98
TM9SF3-201ENST00000371142 BOLLQ8N9W6 283 aaKnown RBP21.16■□□□□ 0.98
TM9SF3-201ENST00000371142 SGTBQ96EQ0 304 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms