RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 CCNG1P51959 295 aa14.9□□□□□ -0.02
VMA21-202ENST00000370361 RPP38P78345 283 aaKnown RBP14.9□□□□□ -0.02
VMA21-202ENST00000370361 IRF9Q00978 393 aa14.9□□□□□ -0.02
VMA21-202ENST00000370361 CDSNQ15517 529 aa14.9□□□□□ -0.02
VMA21-202ENST00000370361 GGTA1PQ4G0N0 100 aa14.9□□□□□ -0.02
VMA21-202ENST00000370361 GXYLT1Q4G148 440 aa14.9□□□□□ -0.02
VMA21-202ENST00000370361 TECRLQ5HYJ1 363 aa14.9□□□□□ -0.02
VMA21-202ENST00000370361 WLSQ5T9L3 541 aa14.9□□□□□ -0.02
VMA21-202ENST00000370361 C6orf163Q5TEZ5 329 aa14.9□□□□□ -0.02
VMA21-202ENST00000370361 MEX3BQ6ZN04 569 aaKnown RBP14.9□□□□□ -0.02
VMA21-202ENST00000370361 MARVELD2Q8N4S9 558 aa14.9□□□□□ -0.02
VMA21-202ENST00000370361 C17orf47Q8NEP4 570 aa14.9□□□□□ -0.02
VMA21-202ENST00000370361 SLC44A1Q8WWI5 657 aa14.9□□□□□ -0.02
VMA21-202ENST00000370361 ATP6V1E2Q96A05 226 aa14.9□□□□□ -0.02
VMA21-202ENST00000370361 GPR78Q96P69 363 aa14.9□□□□□ -0.02
VMA21-202ENST00000370361 SECISBP2Q96T21 854 aaKnown RBP14.9□□□□□ -0.02
VMA21-202ENST00000370361 CNPPD1Q9BV87 410 aa14.9□□□□□ -0.02
VMA21-202ENST00000370361 MCCC2Q9HCC0 563 aa14.9□□□□□ -0.02
VMA21-202ENST00000370361 ACKR4Q9NPB9 350 aa14.9□□□□□ -0.02
VMA21-202ENST00000370361 NINJ2Q9NZG7 142 aa14.9□□□□□ -0.02
VMA21-202ENST00000370361 CPSF2Q9P2I0 782 aaKnown RBP14.9□□□□□ -0.02
VMA21-202ENST00000370361 ZNF180Q9UJW8 692 aa14.9□□□□□ -0.02
VMA21-202ENST00000370361 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.9□□□□□ -0.02
VMA21-202ENST00000370361 DNAJC13O75165 2243 aa14.9□□□□□ -0.02
VMA21-202ENST00000370361 ZNF407Q9C0G0 2248 aa14.89□□□□□ -0.03
VMA21-202ENST00000370361 FBN2P35556 2912 aa14.89□□□□□ -0.03
VMA21-202ENST00000370361 PINLYPA6NC86 204 aa14.89□□□□□ -0.03
VMA21-202ENST00000370361 NPIPA2E9PIF3 369 aa14.89□□□□□ -0.03
VMA21-202ENST00000370361 NPIPA3F8WFD2 350 aa14.89□□□□□ -0.03
VMA21-202ENST00000370361 TP53I11O14683 189 aa14.89□□□□□ -0.03
VMA21-202ENST00000370361 SH3BGRLO75368 114 aa14.89□□□□□ -0.03
VMA21-202ENST00000370361 CCL3P10147 92 aa14.89□□□□□ -0.03
VMA21-202ENST00000370361 ECHS1P30084 290 aa14.89□□□□□ -0.03
VMA21-202ENST00000370361 ARL1P40616 181 aaPredicted RBP14.89□□□□□ -0.03
VMA21-202ENST00000370361 MAGEA5P43359 124 aa14.89□□□□□ -0.03
VMA21-202ENST00000370361 MAGEA12P43365 314 aa14.89□□□□□ -0.03
VMA21-202ENST00000370361 SLC37A1P57057 533 aa14.89□□□□□ -0.03
VMA21-202ENST00000370361 KCNJ2P63252 427 aa14.89□□□□□ -0.03
VMA21-202ENST00000370361 IFT88Q13099 833 aa14.89□□□□□ -0.03
VMA21-202ENST00000370361 EBPQ15125 230 aaKnown RBP14.89□□□□□ -0.03
VMA21-202ENST00000370361 NTRK2Q16620 822 aa14.89□□□□□ -0.03
VMA21-202ENST00000370361 EMC4Q5J8M3 183 aa14.89□□□□□ -0.03
VMA21-202ENST00000370361 UBAP2Q5T6F2 1119 aaKnown RBP14.89□□□□□ -0.03
VMA21-202ENST00000370361 FRG2Q64ET8 278 aa14.89□□□□□ -0.03
VMA21-202ENST00000370361 C18orf63Q68DL7 685 aa14.89□□□□□ -0.03
VMA21-202ENST00000370361 B3GNT6Q6ZMB0 384 aa14.89□□□□□ -0.03
VMA21-202ENST00000370361 OR4N5Q8IXE1 308 aa14.89□□□□□ -0.03
VMA21-202ENST00000370361 CLYBLQ8N0X4 340 aa14.89□□□□□ -0.03
VMA21-202ENST00000370361 CEP112Q8N8E3 955 aa14.89□□□□□ -0.03
VMA21-202ENST00000370361 TRPC4APQ8TEL6 797 aa14.89□□□□□ -0.03
VMA21-202ENST00000370361 FRG2BQ96QU4 278 aa14.89□□□□□ -0.03
VMA21-202ENST00000370361 FMO2Q99518 471 aa14.89□□□□□ -0.03
VMA21-202ENST00000370361 SORBS1Q9BX66 1292 aaKnown RBP14.89□□□□□ -0.03
VMA21-202ENST00000370361 WWTR1Q9GZV5 400 aa14.89□□□□□ -0.03
VMA21-202ENST00000370361 VPS11Q9H270 941 aa14.89□□□□□ -0.03
VMA21-202ENST00000370361 LDAHQ9H6V9 325 aa14.89□□□□□ -0.03
VMA21-202ENST00000370361 ZFP64Q9NPA5 681 aa14.89□□□□□ -0.03
VMA21-202ENST00000370361 NMRK1Q9NWW6 199 aa14.89□□□□□ -0.03
VMA21-202ENST00000370361 RNF6Q9Y252 685 aa14.89□□□□□ -0.03
VMA21-202ENST00000370361 CSMD1Q96PZ7 3565 aa14.89□□□□□ -0.03
VMA21-202ENST00000370361 OTOGQ6ZRI0 2925 aa14.88□□□□□ -0.03
VMA21-202ENST00000370361 TRGV5A0A0B4J1U4 118 aa14.88□□□□□ -0.03
VMA21-202ENST00000370361 A0A0G2JMM0 328 aa14.88□□□□□ -0.03
VMA21-202ENST00000370361 MYOCOSA0A1B0GUC4 107 aa14.88□□□□□ -0.03
VMA21-202ENST00000370361 A0A1W2PPB8 328 aa14.88□□□□□ -0.03
VMA21-202ENST00000370361 A0A1W2PR48 441 aa14.88□□□□□ -0.03
VMA21-202ENST00000370361 A0A1W2PRS3 328 aa14.88□□□□□ -0.03
VMA21-202ENST00000370361 KIR3DP1A8MWS1 328 aa14.88□□□□□ -0.03
VMA21-202ENST00000370361 NADKO95544 446 aaPredicted RBP14.88□□□□□ -0.03
VMA21-202ENST00000370361 AIFM1O95831 613 aa14.88□□□□□ -0.03
VMA21-202ENST00000370361 OTCP00480 354 aa14.88□□□□□ -0.03
VMA21-202ENST00000370361 PIK3R1P27986 724 aa14.88□□□□□ -0.03
VMA21-202ENST00000370361 MSX1P28360 303 aa14.88□□□□□ -0.03
VMA21-202ENST00000370361 GMPRP36959 345 aa14.88□□□□□ -0.03
VMA21-202ENST00000370361 NRG3P56975 720 aa14.88□□□□□ -0.03
VMA21-202ENST00000370361 HERVK_113P63132 956 aa14.88□□□□□ -0.03
VMA21-202ENST00000370361 ERVK-8P63133 956 aa14.88□□□□□ -0.03
VMA21-202ENST00000370361 PMPCAQ10713 525 aa14.88□□□□□ -0.03
VMA21-202ENST00000370361 SF3B4Q15427 424 aaKnown RBP eCLIP14.88□□□□□ -0.036e-7■■■■■ 30.8
VMA21-202ENST00000370361 LYPD8Q6UX82 237 aa14.88□□□□□ -0.03
VMA21-202ENST00000370361 NCCRP1Q6ZVX7 275 aaPredicted RBP14.88□□□□□ -0.03
VMA21-202ENST00000370361 LCA5Q86VQ0 697 aa14.88□□□□□ -0.03
VMA21-202ENST00000370361 LRRC25Q8N386 305 aaPredicted RBP14.88□□□□□ -0.03
VMA21-202ENST00000370361 PTGR2Q8N8N7 351 aaPredicted RBP14.88□□□□□ -0.03
VMA21-202ENST00000370361 OR7G1Q8NGA0 311 aa14.88□□□□□ -0.03
VMA21-202ENST00000370361 IFT81Q8WYA0 676 aa14.88□□□□□ -0.03
VMA21-202ENST00000370361 MRPL57Q9BQC6 102 aaKnown RBP14.88□□□□□ -0.03
VMA21-202ENST00000370361 ERVK-6Q9BXR3 956 aa14.88□□□□□ -0.03
VMA21-202ENST00000370361 ZNF703Q9H7S9 590 aaPredicted RBP14.88□□□□□ -0.03
VMA21-202ENST00000370361 NOL11Q9H8H0 719 aaKnown RBP14.88□□□□□ -0.03
VMA21-202ENST00000370361 TUBA8Q9NY65 449 aaPredicted RBP14.88□□□□□ -0.03
VMA21-202ENST00000370361 KCNN3Q9UGI6 736 aa14.88□□□□□ -0.03
VMA21-202ENST00000370361 ACAD8Q9UKU7 415 aa14.88□□□□□ -0.03
VMA21-202ENST00000370361 ERVK-19Q9WJR5 959 aa14.88□□□□□ -0.03
VMA21-202ENST00000370361 CFL2Q9Y281 166 aa14.88□□□□□ -0.03
VMA21-202ENST00000370361 RNF11Q9Y3C5 154 aa14.88□□□□□ -0.03
VMA21-202ENST00000370361 ZNHIT1O43257 154 aa14.87□□□□□ -0.03
VMA21-202ENST00000370361 TMPRSS11DO60235 418 aa14.87□□□□□ -0.03
VMA21-202ENST00000370361 EEDO75530 441 aaKnown RBP14.87□□□□□ -0.03
VMA21-202ENST00000370361 SNX4O95219 450 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms