RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 ACADVLP49748 655 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 WDR5P61964 334 aaKnown RBP8.17□□□□□ -1.1
ABCA4-201ENST00000370225 DOC2AQ14183 400 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 MLC1Q15049 377 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 TMEM35AQ53FP2 167 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 RPS26P11Q5JNZ5 115 aaPredicted RBP8.17□□□□□ -1.1
ABCA4-201ENST00000370225 SWT1Q5T5J6 900 aaKnown RBP8.17□□□□□ -1.1
ABCA4-201ENST00000370225 KIAA0895LQ68EN5 471 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 DDX1Q92499 740 aaKnown RBP8.17□□□□□ -1.1
ABCA4-201ENST00000370225 MOAP1Q96BY2 351 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 SCGB3A2Q96PL1 93 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 DCSTAMPQ9H295 470 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 MED11Q9P086 117 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 FETUBQ9UGM5 382 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 SLC7A8Q9UHI5 535 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 C10orf71Q711Q0 1435 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 BHMG1C9JSJ3 638 aaPredicted RBP8.17□□□□□ -1.1
ABCA4-201ENST00000370225 HNRNPA2B1P22626 353 aaKnown RBP8.17□□□□□ -1.1
ABCA4-201ENST00000370225 TIA1P31483 386 aaKnown RBP eCLIP8.17□□□□□ -1.1
ABCA4-201ENST00000370225 RGS19P49795 217 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 LIPIQ6XZB0 460 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 KLHDC8AQ8IYD2 350 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 OR5L2Q8NGL0 311 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 OR5P2Q8WZ92 322 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 CIDECQ96AQ7 238 aaPredicted RBP8.17□□□□□ -1.1
ABCA4-201ENST00000370225 TCEAL4Q96EI5 215 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 SLC2A13Q96QE2 648 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 MAPKAP1Q9BPZ7 522 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 XYLT2Q9H1B5 865 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 VDAC3Q9Y277 283 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 C1orf226A1L170 272 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 FAM171A2A8MVW0 826 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 RAD51DO75771 328 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 SPINT3P49223 89 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 EPHA4P54764 986 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 EEF1A2Q05639 463 aaKnown RBP8.17□□□□□ -1.1
ABCA4-201ENST00000370225 SEC23BQ15437 767 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 OR4D1Q15615 310 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 ASTE1Q2TB18 679 aaPredicted RBP8.17□□□□□ -1.1
ABCA4-201ENST00000370225 LACTB2Q53H82 288 aaPredicted RBP8.17□□□□□ -1.1
ABCA4-201ENST00000370225 VTCN1Q7Z7D3 282 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 SLC44A3Q8N4M1 653 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 PNPLA1Q8N8W4 532 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 PROKR1Q8TCW9 393 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 DDIT4LQ96D03 193 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 FAM46AQ96IP4 442 aaKnown RBP8.17□□□□□ -1.1
ABCA4-201ENST00000370225 OR5B2Q96R09 309 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 FUZQ9BT04 418 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 HINT2Q9BX68 163 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 CXXC1Q9P0U4 656 aaPredicted RBP8.17□□□□□ -1.1
ABCA4-201ENST00000370225 MYH1P12882 1939 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 AQP12BA6NM10 295 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 MAS1P04201 325 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 PGCP20142 388 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 CERS1P27544 350 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 RHDQ02161 417 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 PIGFQ07326 219 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 UBE2UQ5VVX9 321 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 XKRXQ6PP77 449 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 ZNF765Q7L2R6 523 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 AQP12AQ8IXF9 295 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 ALDH16A1Q8IZ83 802 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 EID2Q8N6I1 236 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 BBS10Q8TAM1 723 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 ELP5Q8TE02 316 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 ACOT12Q8WYK0 555 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 TCEAL3Q969E4 200 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 TMEM68Q96MH6 324 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 RDH12Q96NR8 316 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 CRB3Q9BUF7 120 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 MROQ9BYG7 248 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 ETAA1Q9NY74 926 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 CD8B2A6NJW9 211 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 ABLIM1O14639 778 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 CD8BP10966 210 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 SMAD2Q15796 467 aaKnown RBP8.17□□□□□ -1.1
ABCA4-201ENST00000370225 TMEFF1Q8IYR6 380 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 IL17RCQ8NAC3 791 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 CLEC1AQ8NC01 280 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 TOR1AIP2Q8NFQ8 470 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 THAP6Q8TBB0 222 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 LRIG1Q96JA1 1093 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 TIMMDC1Q9NPL8 285 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 ICKQ9UPZ9 632 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 TMEM5Q9Y2B1 443 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 CMAHPQ9Y471 501 aa8.17□□□□□ -1.1
ABCA4-201ENST00000370225 ISPDA4D126 451 aa8.16□□□□□ -1.1
ABCA4-201ENST00000370225 H3BUI4 141 aa8.16□□□□□ -1.1
ABCA4-201ENST00000370225 TSPAN4O14817 238 aa8.16□□□□□ -1.1
ABCA4-201ENST00000370225 DFNA5O60443 496 aa8.16□□□□□ -1.1
ABCA4-201ENST00000370225 MPC1LP0DKB6 136 aa8.16□□□□□ -1.1
ABCA4-201ENST00000370225 PCSK2P16519 638 aa8.16□□□□□ -1.1
ABCA4-201ENST00000370225 HOXA11P31270 313 aaPredicted RBP8.16□□□□□ -1.1
ABCA4-201ENST00000370225 SLC6A11P48066 632 aa8.16□□□□□ -1.1
ABCA4-201ENST00000370225 NPRL3Q12980 569 aa8.16□□□□□ -1.1
ABCA4-201ENST00000370225 HNRNPA0Q13151 305 aaKnown RBP8.16□□□□□ -1.1
ABCA4-201ENST00000370225 CES4AQ5XG92 561 aa8.16□□□□□ -1.1
ABCA4-201ENST00000370225 C17orf99Q6UX52 265 aa8.16□□□□□ -1.1
ABCA4-201ENST00000370225 LARP4Q71RC2 724 aaKnown RBP eCLIP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms