RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 OR8K3Q8NH51 312 aa15.23■□□□□ 0.03
COL17A1-202ENST00000369733 SCAMP4Q969E2 229 aa15.23■□□□□ 0.03
COL17A1-202ENST00000369733 SLC22A18Q96BI1 424 aa15.23■□□□□ 0.03
COL17A1-202ENST00000369733 AIFM2Q9BRQ8 373 aa15.23■□□□□ 0.03
COL17A1-202ENST00000369733 BOCQ9BWV1 1114 aa15.23■□□□□ 0.03
COL17A1-202ENST00000369733 XKR8Q9H6D3 395 aa15.23■□□□□ 0.03
COL17A1-202ENST00000369733 WDR6Q9NNW5 1121 aaKnown RBP15.23■□□□□ 0.03
COL17A1-202ENST00000369733 COCHO43405 550 aa15.23■□□□□ 0.03
COL17A1-202ENST00000369733 GJB5O95377 273 aa15.23■□□□□ 0.03
COL17A1-202ENST00000369733 ACTC1P68032 377 aa15.23■□□□□ 0.03
COL17A1-202ENST00000369733 ACTA1P68133 377 aa15.23■□□□□ 0.03
COL17A1-202ENST00000369733 CCDC58Q4VC31 144 aa15.23■□□□□ 0.03
COL17A1-202ENST00000369733 ACBD7Q8N6N7 88 aa15.23■□□□□ 0.03
COL17A1-202ENST00000369733 KREMEN2Q8NCW0 462 aa15.23■□□□□ 0.03
COL17A1-202ENST00000369733 PMEPA1Q969W9 287 aa15.23■□□□□ 0.03
COL17A1-202ENST00000369733 OTUB2Q96DC9 234 aa15.23■□□□□ 0.03
COL17A1-202ENST00000369733 RFPL3O75679 317 aa15.23■□□□□ 0.03
COL17A1-202ENST00000369733 SCGB1D2O95969 90 aa15.23■□□□□ 0.03
COL17A1-202ENST00000369733 C21orf33P30042 268 aaPredicted RBP15.23■□□□□ 0.03
COL17A1-202ENST00000369733 ADH7P40394 386 aa15.23■□□□□ 0.03
COL17A1-202ENST00000369733 ATAD3CQ5T2N8 411 aa15.23■□□□□ 0.03
COL17A1-202ENST00000369733 PPP2R2DQ66LE6 453 aa15.23■□□□□ 0.03
COL17A1-202ENST00000369733 PDZD9Q8IXQ8 264 aa15.23■□□□□ 0.03
COL17A1-202ENST00000369733 OR2L2Q8NH16 312 aa15.23■□□□□ 0.03
COL17A1-202ENST00000369733 NPLOC4Q8TAT6 608 aa15.23■□□□□ 0.03
COL17A1-202ENST00000369733 HEBP1Q9NRV9 189 aa15.23■□□□□ 0.03
COL17A1-202ENST00000369733 GJD2Q9UKL4 321 aa15.23■□□□□ 0.03
COL17A1-202ENST00000369733 GPR52Q9Y2T5 361 aa15.23■□□□□ 0.03
COL17A1-202ENST00000369733 SPO11Q9Y5K1 396 aa15.23■□□□□ 0.03
COL17A1-202ENST00000369733 BLOC1S5-TXNDC5H3BN57 136 aa15.22■□□□□ 0.03
COL17A1-202ENST00000369733 CXCR1P25024 350 aa15.22■□□□□ 0.03
COL17A1-202ENST00000369733 HOXA11P31270 313 aaPredicted RBP15.22■□□□□ 0.03
COL17A1-202ENST00000369733 ZNF791Q3KP31 576 aaPredicted RBP15.22■□□□□ 0.03
COL17A1-202ENST00000369733 CPZQ66K79 652 aa15.22■□□□□ 0.03
COL17A1-202ENST00000369733 FAM198BQ6UWH4 519 aa15.22■□□□□ 0.03
COL17A1-202ENST00000369733 GPR149Q86SP6 731 aa15.22■□□□□ 0.03
COL17A1-202ENST00000369733 SAV1Q9H4B6 383 aaPredicted RBP15.22■□□□□ 0.03
COL17A1-202ENST00000369733 TMEM98Q9Y2Y6 226 aa15.22■□□□□ 0.03
COL17A1-202ENST00000369733 PCDHA9Q9Y5H5 950 aa15.22■□□□□ 0.03
COL17A1-202ENST00000369733 H7BY64 318 aa15.22■□□□□ 0.03
COL17A1-202ENST00000369733 HMGCLP35914 325 aa15.22■□□□□ 0.03
COL17A1-202ENST00000369733 SELPLGQ14242 412 aa15.22■□□□□ 0.03
COL17A1-202ENST00000369733 TBC1D25Q3MII6 688 aa15.22■□□□□ 0.03
COL17A1-202ENST00000369733 TRNP1Q6NT89 227 aa15.22■□□□□ 0.03
COL17A1-202ENST00000369733 GET4Q7L5D6 327 aaPredicted RBP15.22■□□□□ 0.03
COL17A1-202ENST00000369733 SERPINA11Q86U17 422 aa15.22■□□□□ 0.03
COL17A1-202ENST00000369733 SUN3Q8TAQ9 357 aa15.22■□□□□ 0.03
COL17A1-202ENST00000369733 PRAP1Q96NZ9 151 aa15.22■□□□□ 0.03
COL17A1-202ENST00000369733 RETREG1Q9H6L5 497 aa15.22■□□□□ 0.03
COL17A1-202ENST00000369733 LAMP5Q9UJQ1 280 aa15.22■□□□□ 0.03
COL17A1-202ENST00000369733 FBXO9Q9UK97 447 aaPredicted RBP15.22■□□□□ 0.03
COL17A1-202ENST00000369733 A0A1W2PQ09 198 aa15.22■□□□□ 0.03
COL17A1-202ENST00000369733 FUCA1P04066 466 aa15.22■□□□□ 0.03
COL17A1-202ENST00000369733 GJA1P17302 382 aa15.22■□□□□ 0.03
COL17A1-202ENST00000369733 CFL1P23528 166 aaKnown RBP15.22■□□□□ 0.03
COL17A1-202ENST00000369733 MAGEA3P43357 314 aa15.22■□□□□ 0.03
COL17A1-202ENST00000369733 WNT4P56705 351 aa15.22■□□□□ 0.03
COL17A1-202ENST00000369733 SMN1Q16637 294 aaKnown RBP15.22■□□□□ 0.03
COL17A1-202ENST00000369733 OR8K5Q8NH50 307 aa15.22■□□□□ 0.03
COL17A1-202ENST00000369733 TMEM19Q96HH6 336 aa15.22■□□□□ 0.03
COL17A1-202ENST00000369733 F5H0A9 414 aaPredicted RBP15.22■□□□□ 0.03
COL17A1-202ENST00000369733 PAHP00439 452 aa15.22■□□□□ 0.03
COL17A1-202ENST00000369733 TNFSF8P32971 234 aa15.22■□□□□ 0.03
COL17A1-202ENST00000369733 TBPL1P62380 186 aa15.22■□□□□ 0.03
COL17A1-202ENST00000369733 VEZF1Q14119 521 aa15.22■□□□□ 0.03
COL17A1-202ENST00000369733 WDR45BQ5MNZ6 344 aa15.22■□□□□ 0.03
COL17A1-202ENST00000369733 RPL3LQ92901 407 aaKnown RBP15.22■□□□□ 0.03
COL17A1-202ENST00000369733 CHFRQ96EP1 664 aa15.22■□□□□ 0.03
COL17A1-202ENST00000369733 TBCEQ15813 527 aaPredicted RBP15.21■□□□□ 0.03
COL17A1-202ENST00000369733 SPATC1Q76KD6 591 aa15.21■□□□□ 0.03
COL17A1-202ENST00000369733 HDDC3Q8N4P3 179 aa15.21■□□□□ 0.03
COL17A1-202ENST00000369733 PROKR1Q8TCW9 393 aa15.21■□□□□ 0.03
COL17A1-202ENST00000369733 RHBDF1Q96CC6 855 aa15.21■□□□□ 0.03
COL17A1-202ENST00000369733 USP22Q9UPT9 525 aa15.21■□□□□ 0.03
COL17A1-202ENST00000369733 Q9Y3F1 56 aa15.21■□□□□ 0.03
COL17A1-202ENST00000369733 COQ9O75208 318 aa15.21■□□□□ 0.03
COL17A1-202ENST00000369733 SNAI1O95863 264 aaPredicted RBP15.21■□□□□ 0.03
COL17A1-202ENST00000369733 PFKLP17858 780 aa15.21■□□□□ 0.03
COL17A1-202ENST00000369733 ETV3P41162 512 aa15.21■□□□□ 0.03
COL17A1-202ENST00000369733 ZNF527Q8NB42 609 aa15.21■□□□□ 0.03
COL17A1-202ENST00000369733 OR4K5Q8NGD3 323 aa15.21■□□□□ 0.03
COL17A1-202ENST00000369733 OR2T35Q8NGX2 323 aa15.21■□□□□ 0.03
COL17A1-202ENST00000369733 PCDHGA12O60330 932 aa15.21■□□□□ 0.03
COL17A1-202ENST00000369733 FHP07954 510 aa15.21■□□□□ 0.03
COL17A1-202ENST00000369733 RASGEF1BQ0VAM2 473 aa15.21■□□□□ 0.03
COL17A1-202ENST00000369733 C1orf189Q5VU69 101 aa15.21■□□□□ 0.03
COL17A1-202ENST00000369733 PM20D2Q8IYS1 436 aa15.21■□□□□ 0.03
COL17A1-202ENST00000369733 ZNF300Q96RE9 604 aaPredicted RBP15.21■□□□□ 0.03
COL17A1-202ENST00000369733 PAAF1Q9BRP4 392 aa15.21■□□□□ 0.03
COL17A1-202ENST00000369733 MROQ9BYG7 248 aa15.21■□□□□ 0.03
COL17A1-202ENST00000369733 HTR2AP28223 471 aa15.21■□□□□ 0.02
COL17A1-202ENST00000369733 PCGF2P35227 344 aa15.21■□□□□ 0.02
COL17A1-202ENST00000369733 NAA10P41227 235 aaPredicted RBP15.21■□□□□ 0.02
COL17A1-202ENST00000369733 AFF1P51825 1210 aaKnown RBP15.21■□□□□ 0.02
COL17A1-202ENST00000369733 SF3A2Q15428 464 aaKnown RBP15.21■□□□□ 0.02
COL17A1-202ENST00000369733 TSPAN33Q86UF1 283 aa15.21■□□□□ 0.02
COL17A1-202ENST00000369733 SYT14Q8NB59 555 aa15.21■□□□□ 0.02
COL17A1-202ENST00000369733 NSMAFQ92636 917 aa15.21■□□□□ 0.02
COL17A1-202ENST00000369733 COQ10AQ96MF6 247 aa15.21■□□□□ 0.02
COL17A1-202ENST00000369733 OCEL1Q9H607 264 aa15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms