RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 ANKDD1BA6NHY2 528 aa10.11□□□□□ -0.79
TPM3-212ENST00000368533 C12orf71A8MTZ7 269 aa10.11□□□□□ -0.79
TPM3-212ENST00000368533 FAM220BPB1ANY3 271 aa10.11□□□□□ -0.79
TPM3-212ENST00000368533 RETP07949 1114 aa10.11□□□□□ -0.79
TPM3-212ENST00000368533 CD6P30203 668 aa10.11□□□□□ -0.79
TPM3-212ENST00000368533 RPL6Q02878 288 aaKnown RBP10.11□□□□□ -0.79
TPM3-212ENST00000368533 ABHD18Q0P651 414 aa10.11□□□□□ -0.79
TPM3-212ENST00000368533 SRSF5Q13243 272 aaKnown RBP10.11□□□□□ -0.79
TPM3-212ENST00000368533 FZD5Q13467 585 aa10.11□□□□□ -0.79
TPM3-212ENST00000368533 LRRC32Q14392 662 aa10.11□□□□□ -0.79
TPM3-212ENST00000368533 GGTA1PQ4G0N0 100 aa10.11□□□□□ -0.79
TPM3-212ENST00000368533 HIST2H2AA3Q6FI13 130 aa10.11□□□□□ -0.79
TPM3-212ENST00000368533 LSRQ86X29 649 aaPredicted RBP10.11□□□□□ -0.79
TPM3-212ENST00000368533 TRIM48Q8IWZ4 208 aa10.11□□□□□ -0.79
TPM3-212ENST00000368533 RORBQ92753 470 aa10.11□□□□□ -0.79
TPM3-212ENST00000368533 CCDC120Q96HB5 630 aa10.11□□□□□ -0.79
TPM3-212ENST00000368533 DPH7Q9BTV6 452 aa10.11□□□□□ -0.79
TPM3-212ENST00000368533 DSN1Q9H410 356 aa10.11□□□□□ -0.79
TPM3-212ENST00000368533 TBC1D17Q9HA65 648 aa10.11□□□□□ -0.79
TPM3-212ENST00000368533 SERHLQ9NQF3 203 aa10.11□□□□□ -0.79
TPM3-212ENST00000368533 DMRT3Q9NQL9 472 aa10.11□□□□□ -0.79
TPM3-212ENST00000368533 VNN3Q9NY84 501 aa10.11□□□□□ -0.79
TPM3-212ENST00000368533 SCML1Q9UN30 329 aa10.11□□□□□ -0.79
TPM3-212ENST00000368533 SAMD4AQ9UPU9 718 aaKnown RBP10.11□□□□□ -0.79
TPM3-212ENST00000368533 SATB2Q9UPW6 733 aa10.11□□□□□ -0.79
TPM3-212ENST00000368533 AP3M1Q9Y2T2 418 aa10.11□□□□□ -0.79
TPM3-212ENST00000368533 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.11□□□□□ -0.79
TPM3-212ENST00000368533 A0A0G2JMP0 313 aa10.11□□□□□ -0.79
TPM3-212ENST00000368533 UPK1BO75841 260 aa10.11□□□□□ -0.79
TPM3-212ENST00000368533 MYF5P13349 255 aa10.11□□□□□ -0.79
TPM3-212ENST00000368533 CTSEP14091 401 aa10.11□□□□□ -0.79
TPM3-212ENST00000368533 GSTM2P28161 218 aa10.11□□□□□ -0.79
TPM3-212ENST00000368533 PEBP1P30086 187 aaKnown RBP10.11□□□□□ -0.79
TPM3-212ENST00000368533 HTR2BP41595 481 aa10.11□□□□□ -0.79
TPM3-212ENST00000368533 TAS2R50P59544 299 aa10.11□□□□□ -0.79
TPM3-212ENST00000368533 POU6F2P78424 691 aaPredicted RBP10.11□□□□□ -0.79
TPM3-212ENST00000368533 RPA4Q13156 261 aa10.11□□□□□ -0.79
TPM3-212ENST00000368533 UGT8Q16880 541 aa10.11□□□□□ -0.79
TPM3-212ENST00000368533 ZFP69Q49AA0 526 aa10.11□□□□□ -0.79
TPM3-212ENST00000368533 CEP68Q76N32 757 aa10.11□□□□□ -0.79
TPM3-212ENST00000368533 GDPD3Q7L5L3 318 aa10.11□□□□□ -0.79
TPM3-212ENST00000368533 FAM9CQ8IZT9 166 aa10.11□□□□□ -0.79
TPM3-212ENST00000368533 FAM46DQ8NEK8 389 aa10.11□□□□□ -0.79
TPM3-212ENST00000368533 OR5AK3PQ8NH89 298 aa10.11□□□□□ -0.79
TPM3-212ENST00000368533 REXO5Q96IC2 774 aaKnown RBP10.11□□□□□ -0.79
TPM3-212ENST00000368533 NARFLQ9H6Q4 476 aa10.11□□□□□ -0.79
TPM3-212ENST00000368533 C14orf119Q9NWQ9 140 aa10.11□□□□□ -0.79
TPM3-212ENST00000368533 WSB2Q9NYS7 404 aaPredicted RBP10.11□□□□□ -0.79
TPM3-212ENST00000368533 ERVK-18Q9QC07 812 aa10.11□□□□□ -0.79
TPM3-212ENST00000368533 ACSL6Q9UKU0 697 aa10.11□□□□□ -0.79
TPM3-212ENST00000368533 H0YIV9 168 aa10.11□□□□□ -0.79
TPM3-212ENST00000368533 ALPPL2P10696 532 aa10.11□□□□□ -0.79
TPM3-212ENST00000368533 JUNBP17275 347 aaPredicted RBP10.11□□□□□ -0.79
TPM3-212ENST00000368533 RAB28P51157 221 aa10.11□□□□□ -0.79
TPM3-212ENST00000368533 RAB8AP61006 207 aa10.11□□□□□ -0.79
TPM3-212ENST00000368533 AGERQ15109 404 aa10.11□□□□□ -0.79
TPM3-212ENST00000368533 NPTX1Q15818 432 aa10.11□□□□□ -0.79
TPM3-212ENST00000368533 DGUOKQ16854 277 aa10.11□□□□□ -0.79
TPM3-212ENST00000368533 OR2T5Q6IEZ7 315 aa10.11□□□□□ -0.79
TPM3-212ENST00000368533 SYT13Q7L8C5 426 aa10.11□□□□□ -0.79
TPM3-212ENST00000368533 CHCHD4Q8N4Q1 142 aa10.11□□□□□ -0.79
TPM3-212ENST00000368533 LSMEM1Q8N8F7 131 aa10.11□□□□□ -0.79
TPM3-212ENST00000368533 OR2A1Q8NGT9 310 aa10.11□□□□□ -0.79
TPM3-212ENST00000368533 OR6F1Q8NGZ6 308 aa10.11□□□□□ -0.79
TPM3-212ENST00000368533 OR2T29Q8NH02 315 aa10.11□□□□□ -0.79
TPM3-212ENST00000368533 RHOXF1Q8NHV9 184 aa10.11□□□□□ -0.79
TPM3-212ENST00000368533 DOK4Q8TEW6 326 aa10.11□□□□□ -0.79
TPM3-212ENST00000368533 SMPDL3AQ92484 453 aa10.11□□□□□ -0.79
TPM3-212ENST00000368533 HSPA12BQ96MM6 686 aa10.11□□□□□ -0.79
TPM3-212ENST00000368533 RDH12Q96NR8 316 aa10.11□□□□□ -0.79
TPM3-212ENST00000368533 C17orf62Q9BQA9 187 aa10.11□□□□□ -0.79
TPM3-212ENST00000368533 OR2B2Q9GZK3 357 aa10.11□□□□□ -0.79
TPM3-212ENST00000368533 KLHL31Q9H511 634 aa10.11□□□□□ -0.79
TPM3-212ENST00000368533 SLC2A4RGQ9NR83 387 aa10.11□□□□□ -0.79
TPM3-212ENST00000368533 TOR4AQ9NXH8 423 aa10.11□□□□□ -0.79
TPM3-212ENST00000368533 SCN3BQ9NY72 215 aa10.11□□□□□ -0.79
TPM3-212ENST00000368533 USP36Q9P275 1121 aaKnown RBP10.11□□□□□ -0.79
TPM3-212ENST00000368533 IGHV1OR15-9A0A0B4J2B8 117 aa10.1□□□□□ -0.79
TPM3-212ENST00000368533 MAN2B1O00754 1011 aa10.1□□□□□ -0.79
TPM3-212ENST00000368533 HAT1O14929 419 aa10.1□□□□□ -0.79
TPM3-212ENST00000368533 NME6O75414 186 aaPredicted RBP10.1□□□□□ -0.79
TPM3-212ENST00000368533 CCNDBP1O95273 360 aa10.1□□□□□ -0.79
TPM3-212ENST00000368533 FADS2O95864 444 aaKnown RBP10.1□□□□□ -0.79
TPM3-212ENST00000368533 RPN2P04844 631 aa10.1□□□□□ -0.79
TPM3-212ENST00000368533 BCKDHBP21953 392 aa10.1□□□□□ -0.79
TPM3-212ENST00000368533 ENPP1P22413 925 aa10.1□□□□□ -0.79
TPM3-212ENST00000368533 PPP5CP53041 499 aa10.1□□□□□ -0.79
TPM3-212ENST00000368533 TUBA1BP68363 451 aa10.1□□□□□ -0.79
TPM3-212ENST00000368533 DUOXA1Q1HG43 343 aa10.1□□□□□ -0.79
TPM3-212ENST00000368533 LEXMQ3ZCV2 418 aa10.1□□□□□ -0.79
TPM3-212ENST00000368533 ZNF385BQ569K4 471 aa10.1□□□□□ -0.79
TPM3-212ENST00000368533 KIAA1614Q5VZ46 1190 aa10.1□□□□□ -0.79
TPM3-212ENST00000368533 KIAA0895LQ68EN5 471 aa10.1□□□□□ -0.79
TPM3-212ENST00000368533 TUBA1AQ71U36 451 aa10.1□□□□□ -0.79
TPM3-212ENST00000368533 CYP4Z1Q86W10 505 aa10.1□□□□□ -0.79
TPM3-212ENST00000368533 METTL4Q8N3J2 472 aa10.1□□□□□ -0.79
TPM3-212ENST00000368533 ZNF540Q8NDQ6 660 aa10.1□□□□□ -0.79
TPM3-212ENST00000368533 VMP1Q96GC9 406 aa10.1□□□□□ -0.79
TPM3-212ENST00000368533 TIMM29Q9BSF4 260 aa10.1□□□□□ -0.79
TPM3-212ENST00000368533 BTBD2Q9BX70 525 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms