RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 TEX37Q96LM6 180 aa12.98□□□□□ -0.33
TPM3-211ENST00000368531 IMMP1LQ96LU5 166 aa12.98□□□□□ -0.33
TPM3-211ENST00000368531 ZNF681Q96N22 645 aa12.98□□□□□ -0.33
TPM3-211ENST00000368531 SIKE1Q9BRV8 207 aa12.98□□□□□ -0.33
TPM3-211ENST00000368531 PELOQ9BRX2 385 aaKnown RBP12.98□□□□□ -0.33
TPM3-211ENST00000368531 TUBB6Q9BUF5 446 aa12.98□□□□□ -0.33
TPM3-211ENST00000368531 OR8D2Q9GZM6 311 aa12.98□□□□□ -0.33
TPM3-211ENST00000368531 ATP13A2Q9NQ11 1180 aa12.98□□□□□ -0.33
TPM3-211ENST00000368531 ATP6V1HQ9UI12 483 aa12.98□□□□□ -0.33
TPM3-211ENST00000368531 HRKO00198 91 aa12.97□□□□□ -0.33
TPM3-211ENST00000368531 ANKRD28O15084 1053 aa12.97□□□□□ -0.33
TPM3-211ENST00000368531 PDPK1O15530 556 aa12.97□□□□□ -0.33
TPM3-211ENST00000368531 CT62P0C5K7 136 aa12.97□□□□□ -0.33
TPM3-211ENST00000368531 DRD4P21917 467 aa12.97□□□□□ -0.33
TPM3-211ENST00000368531 ITGA3P26006 1051 aa12.97□□□□□ -0.33
TPM3-211ENST00000368531 NTSP30990 170 aa12.97□□□□□ -0.33
TPM3-211ENST00000368531 RPL3P39023 403 aaKnown RBP12.97□□□□□ -0.33
TPM3-211ENST00000368531 NCBP2P52298 156 aaKnown RBP eCLIP12.97□□□□□ -0.33
TPM3-211ENST00000368531 STX1BP61266 288 aa12.97□□□□□ -0.33
TPM3-211ENST00000368531 AIMP2Q13155 320 aaKnown RBP12.97□□□□□ -0.33
TPM3-211ENST00000368531 PDE7AQ13946 482 aa12.97□□□□□ -0.33
TPM3-211ENST00000368531 TBR1Q16650 682 aa12.97□□□□□ -0.33
TPM3-211ENST00000368531 GSTA3Q16772 222 aa12.97□□□□□ -0.33
TPM3-211ENST00000368531 MPEG1Q2M385 716 aa12.97□□□□□ -0.33
TPM3-211ENST00000368531 C6orf163Q5TEZ5 329 aa12.97□□□□□ -0.33
TPM3-211ENST00000368531 RIMKLAQ8IXN7 391 aa12.97□□□□□ -0.33
TPM3-211ENST00000368531 FAM9CQ8IZT9 166 aa12.97□□□□□ -0.33
TPM3-211ENST00000368531 KIF2BQ8N4N8 673 aa12.97□□□□□ -0.33
TPM3-211ENST00000368531 ZNF321PQ8N8H1 164 aa12.97□□□□□ -0.33
TPM3-211ENST00000368531 NFAM1Q8NET5 270 aaPredicted RBP12.97□□□□□ -0.33
TPM3-211ENST00000368531 OR9A2Q8NGT5 310 aa12.97□□□□□ -0.33
TPM3-211ENST00000368531 APOBEC4Q8WW27 367 aaKnown RBP12.97□□□□□ -0.33
TPM3-211ENST00000368531 KAT2AQ92830 837 aa12.97□□□□□ -0.33
TPM3-211ENST00000368531 DAZLQ92904 295 aaKnown RBP12.97□□□□□ -0.33
TPM3-211ENST00000368531 NCLNQ969V3 563 aa12.97□□□□□ -0.33
TPM3-211ENST00000368531 MTERF3Q96E29 417 aa12.97□□□□□ -0.33
TPM3-211ENST00000368531 PRPF18Q99633 342 aaKnown RBP12.97□□□□□ -0.33
TPM3-211ENST00000368531 NSRP1Q9H0G5 558 aaKnown RBP12.97□□□□□ -0.33
TPM3-211ENST00000368531 GLIPR2Q9H4G4 154 aa12.97□□□□□ -0.33
TPM3-211ENST00000368531 PRORYQ9H606 182 aa12.97□□□□□ -0.33
TPM3-211ENST00000368531 SLAMF7Q9NQ25 335 aa12.97□□□□□ -0.33
TPM3-211ENST00000368531 TAS2R7Q9NYW3 318 aa12.97□□□□□ -0.33
TPM3-211ENST00000368531 KLHL14Q9P2G3 628 aa12.97□□□□□ -0.33
TPM3-211ENST00000368531 ERVK-19Q9WJR5 959 aa12.97□□□□□ -0.33
TPM3-211ENST00000368531 DOCK10Q96BY6 2186 aa12.97□□□□□ -0.33
TPM3-211ENST00000368531 A0A1W2PQ72 361 aa12.96□□□□□ -0.33
TPM3-211ENST00000368531 MYO1GB0I1T2 1018 aa12.96□□□□□ -0.33
TPM3-211ENST00000368531 DYRK3O43781 588 aa12.96□□□□□ -0.33
TPM3-211ENST00000368531 DDAH2O95865 285 aa12.96□□□□□ -0.33
TPM3-211ENST00000368531 ITGAMP11215 1152 aa12.96□□□□□ -0.33
TPM3-211ENST00000368531 IL12AP29459 219 aa12.96□□□□□ -0.33
TPM3-211ENST00000368531 SSTR4P31391 388 aa12.96□□□□□ -0.33
TPM3-211ENST00000368531 MPIP34949 423 aa12.96□□□□□ -0.33
TPM3-211ENST00000368531 DGKQP52824 942 aa12.96□□□□□ -0.33
TPM3-211ENST00000368531 MANFP55145 182 aaKnown RBP12.96□□□□□ -0.33
TPM3-211ENST00000368531 HSPB3Q12988 150 aa12.96□□□□□ -0.33
TPM3-211ENST00000368531 EXT1Q16394 746 aa12.96□□□□□ -0.33
TPM3-211ENST00000368531 PDCD4Q53EL6 469 aaKnown RBP12.96□□□□□ -0.33
TPM3-211ENST00000368531 PLAG1Q6DJT9 500 aa12.96□□□□□ -0.33
TPM3-211ENST00000368531 OR4F3Q6IEY1 312 aa12.96□□□□□ -0.33
TPM3-211ENST00000368531 BORAQ6PGQ7 559 aa12.96□□□□□ -0.33
TPM3-211ENST00000368531 PAOXQ6QHF9 649 aa12.96□□□□□ -0.33
TPM3-211ENST00000368531 ZNF551Q7Z340 670 aaPredicted RBP12.96□□□□□ -0.33
TPM3-211ENST00000368531 GALNT12Q8IXK2 581 aa12.96□□□□□ -0.33
TPM3-211ENST00000368531 KBTBD2Q8IY47 623 aa12.96□□□□□ -0.33
TPM3-211ENST00000368531 SAMD14Q8IZD0 417 aaPredicted RBP12.96□□□□□ -0.33
TPM3-211ENST00000368531 MIER2Q8N344 545 aa12.96□□□□□ -0.33
TPM3-211ENST00000368531 C7orf57Q8NEG2 295 aa12.96□□□□□ -0.33
TPM3-211ENST00000368531 B3GNT7Q8NFL0 401 aa12.96□□□□□ -0.33
TPM3-211ENST00000368531 OR9I1Q8NGQ6 314 aa12.96□□□□□ -0.33
TPM3-211ENST00000368531 OR14A16Q8NHC5 309 aa12.96□□□□□ -0.33
TPM3-211ENST00000368531 SLC2A12Q8TD20 617 aa12.96□□□□□ -0.33
TPM3-211ENST00000368531 SNRNP27Q8WVK2 155 aaKnown RBP12.96□□□□□ -0.33
TPM3-211ENST00000368531 C10orf82Q8WW14 230 aa12.96□□□□□ -0.33
TPM3-211ENST00000368531 SENP5Q96HI0 755 aaPredicted RBP12.96□□□□□ -0.33
TPM3-211ENST00000368531 MAGED4Q96JG8 741 aa12.96□□□□□ -0.33
TPM3-211ENST00000368531 ZBTB18Q99592 522 aa12.96□□□□□ -0.33
TPM3-211ENST00000368531 DUSP26Q9BV47 211 aa12.96□□□□□ -0.33
TPM3-211ENST00000368531 NUDT9Q9BW91 350 aa12.96□□□□□ -0.33
TPM3-211ENST00000368531 ANKRA2Q9H9E1 313 aa12.96□□□□□ -0.33
TPM3-211ENST00000368531 CXorf21Q9HAI6 301 aa12.96□□□□□ -0.33
TPM3-211ENST00000368531 ADAM21Q9UKJ8 722 aa12.96□□□□□ -0.33
TPM3-211ENST00000368531 MAPRE3Q9UPY8 281 aa12.96□□□□□ -0.33
TPM3-211ENST00000368531 IGF2RP11717 2491 aa12.96□□□□□ -0.34
TPM3-211ENST00000368531 TNRC6AQ8NDV7 1962 aaKnown RBP12.95□□□□□ -0.34
TPM3-211ENST00000368531 TRBV11-1A0A0K0K1C0 115 aa12.95□□□□□ -0.34
TPM3-211ENST00000368531 SYNDIG1LA6NDD5 238 aa12.95□□□□□ -0.34
TPM3-211ENST00000368531 A8MUI8 341 aa12.95□□□□□ -0.34
TPM3-211ENST00000368531 CFLARO15519 480 aa12.95□□□□□ -0.34
TPM3-211ENST00000368531 TBX19O60806 448 aa12.95□□□□□ -0.34
TPM3-211ENST00000368531 SLC22A3O75751 556 aa12.95□□□□□ -0.34
TPM3-211ENST00000368531 ATP1B1P05026 303 aa12.95□□□□□ -0.34
TPM3-211ENST00000368531 ICAM2P13598 275 aa12.95□□□□□ -0.34
TPM3-211ENST00000368531 DDX5P17844 614 aaKnown RBP12.95□□□□□ -0.34
TPM3-211ENST00000368531 GPX3P22352 226 aa12.95□□□□□ -0.34
TPM3-211ENST00000368531 S100A3P33764 101 aa12.95□□□□□ -0.34
TPM3-211ENST00000368531 GPC1P35052 558 aa12.95□□□□□ -0.34
TPM3-211ENST00000368531 CLNS1AP54105 237 aaKnown RBP12.95□□□□□ -0.34
TPM3-211ENST00000368531 MRPS35P82673 323 aaKnown RBP12.95□□□□□ -0.34
TPM3-211ENST00000368531 EXOSC7Q15024 291 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms