RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 TMEM159Q96B96 161 aa12.9□□□□□ -0.34
PRKN-205ENST00000366897 RIPOR3Q96MK2 946 aa12.9□□□□□ -0.34
PRKN-205ENST00000366897 WDFY2Q96P53 400 aa12.9□□□□□ -0.34
PRKN-205ENST00000366897 RIOK2Q9BVS4 552 aaKnown RBP12.9□□□□□ -0.34
PRKN-205ENST00000366897 PRR14Q9BWN1 585 aa12.9□□□□□ -0.34
PRKN-205ENST00000366897 GALNT9Q9HCQ5 603 aa12.9□□□□□ -0.34
PRKN-205ENST00000366897 MYO10Q9HD67 2058 aa12.9□□□□□ -0.34
PRKN-205ENST00000366897 A0A1B0GVC2 190 aa12.9□□□□□ -0.34
PRKN-205ENST00000366897 A6NIN4 97 aa12.9□□□□□ -0.34
PRKN-205ENST00000366897 C5orf58C9J3I9 102 aa12.9□□□□□ -0.34
PRKN-205ENST00000366897 M0R3H8 397 aa12.9□□□□□ -0.34
PRKN-205ENST00000366897 C21orf58P58505 322 aa12.9□□□□□ -0.34
PRKN-205ENST00000366897 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.9□□□□□ -0.34
PRKN-205ENST00000366897 SP140Q13342 867 aa12.9□□□□□ -0.34
PRKN-205ENST00000366897 ZNF630Q2M218 657 aaPredicted RBP12.9□□□□□ -0.34
PRKN-205ENST00000366897 CNIH2Q6PI25 160 aa12.9□□□□□ -0.34
PRKN-205ENST00000366897 SLCO4C1Q6ZQN7 724 aa12.9□□□□□ -0.34
PRKN-205ENST00000366897 CAMKMTQ7Z624 323 aa12.9□□□□□ -0.34
PRKN-205ENST00000366897 TMC8Q8IU68 726 aa12.9□□□□□ -0.34
PRKN-205ENST00000366897 Q8N402 240 aa12.9□□□□□ -0.34
PRKN-205ENST00000366897 TMEM19Q96HH6 336 aa12.9□□□□□ -0.34
PRKN-205ENST00000366897 HDHD5Q9BXW7 423 aa12.9□□□□□ -0.34
PRKN-205ENST00000366897 FAM83DQ9H4H8 585 aa12.9□□□□□ -0.34
PRKN-205ENST00000366897 FZD3Q9NPG1 666 aa12.9□□□□□ -0.34
PRKN-205ENST00000366897 SLAMF7Q9NQ25 335 aa12.9□□□□□ -0.34
PRKN-205ENST00000366897 SEMA3GQ9NS98 782 aa12.9□□□□□ -0.34
PRKN-205ENST00000366897 TEKT2Q9UIF3 430 aa12.9□□□□□ -0.34
PRKN-205ENST00000366897 DSPPQ9NZW4 1301 aa12.9□□□□□ -0.34
PRKN-205ENST00000366897 PLXND1Q9Y4D7 1925 aa12.89□□□□□ -0.35
PRKN-205ENST00000366897 NRG2O14511 850 aaPredicted RBP12.89□□□□□ -0.35
PRKN-205ENST00000366897 DVL2O14641 736 aa12.89□□□□□ -0.35
PRKN-205ENST00000366897 PRRG1O14668 218 aa12.89□□□□□ -0.35
PRKN-205ENST00000366897 CKMP06732 381 aa12.89□□□□□ -0.35
PRKN-205ENST00000366897 GSTM1P09488 218 aa12.89□□□□□ -0.35
PRKN-205ENST00000366897 SLC2A2P11168 524 aaPredicted RBP12.89□□□□□ -0.35
PRKN-205ENST00000366897 PTNP21246 168 aa12.89□□□□□ -0.35
PRKN-205ENST00000366897 ALAS2P22557 587 aa12.89□□□□□ -0.35
PRKN-205ENST00000366897 ITGB7P26010 798 aa12.89□□□□□ -0.35
PRKN-205ENST00000366897 MAP2K3P46734 347 aa12.89□□□□□ -0.35
PRKN-205ENST00000366897 TBPL1P62380 186 aa12.89□□□□□ -0.35
PRKN-205ENST00000366897 HSPB3Q12988 150 aa12.89□□□□□ -0.35
PRKN-205ENST00000366897 LRRC32Q14392 662 aa12.89□□□□□ -0.35
PRKN-205ENST00000366897 PGBD2Q6P3X8 592 aa12.89□□□□□ -0.35
PRKN-205ENST00000366897 SLC39A5Q6ZMH5 540 aa12.89□□□□□ -0.35
PRKN-205ENST00000366897 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.89□□□□□ -0.35
PRKN-205ENST00000366897 HCAR2Q8TDS4 363 aa12.89□□□□□ -0.35
PRKN-205ENST00000366897 UPRTQ96BW1 309 aa12.89□□□□□ -0.35
PRKN-205ENST00000366897 GPA33Q99795 319 aa12.89□□□□□ -0.35
PRKN-205ENST00000366897 TMEM38AQ9H6F2 299 aa12.89□□□□□ -0.35
PRKN-205ENST00000366897 MIEF1Q9NQG6 463 aa12.89□□□□□ -0.35
PRKN-205ENST00000366897 CFAP97Q9P2B7 532 aa12.89□□□□□ -0.35
PRKN-205ENST00000366897 DKK3Q9UBP4 350 aa12.89□□□□□ -0.35
PRKN-205ENST00000366897 ATP6V1HQ9UI12 483 aa12.89□□□□□ -0.35
PRKN-205ENST00000366897 RPL36Q9Y3U8 105 aaKnown RBP12.89□□□□□ -0.35
PRKN-205ENST00000366897 KCNE2Q9Y6J6 123 aa12.89□□□□□ -0.35
PRKN-205ENST00000366897 A0A1W2PQ45 241 aaPredicted RBP12.89□□□□□ -0.35
PRKN-205ENST00000366897 A0A1W2PQY0 241 aa12.89□□□□□ -0.35
PRKN-205ENST00000366897 SERTM1A2A2V5 107 aa12.89□□□□□ -0.35
PRKN-205ENST00000366897 SLC35F4A4IF30 521 aa12.89□□□□□ -0.35
PRKN-205ENST00000366897 UGDHO60701 494 aa12.89□□□□□ -0.35
PRKN-205ENST00000366897 ALPPP05187 535 aa12.89□□□□□ -0.35
PRKN-205ENST00000366897 PIPP12273 146 aaPredicted RBP12.89□□□□□ -0.35
PRKN-205ENST00000366897 SYN1P17600 705 aa12.89□□□□□ -0.35
PRKN-205ENST00000366897 POLR2EP19388 210 aaKnown RBP12.89□□□□□ -0.35
PRKN-205ENST00000366897 ENDOUP21128 410 aaKnown RBP12.89□□□□□ -0.35
PRKN-205ENST00000366897 EVI2BP34910 448 aa12.89□□□□□ -0.35
PRKN-205ENST00000366897 MLLT3P42568 568 aaPredicted RBP12.89□□□□□ -0.35
PRKN-205ENST00000366897 AVPR1BP47901 424 aa12.89□□□□□ -0.35
PRKN-205ENST00000366897 ACLYP53396 1101 aa12.89□□□□□ -0.35
PRKN-205ENST00000366897 FABP5Q01469 135 aa12.89□□□□□ -0.35
PRKN-205ENST00000366897 ALDH6A1Q02252 535 aaKnown RBP12.89□□□□□ -0.35
PRKN-205ENST00000366897 MLLT11Q13015 90 aaPredicted RBP12.89□□□□□ -0.35
PRKN-205ENST00000366897 SYT14P1Q58G82 188 aa12.89□□□□□ -0.35
PRKN-205ENST00000366897 TRIQKQ629K1 86 aa12.89□□□□□ -0.35
PRKN-205ENST00000366897 TECPR1Q7Z6L1 1165 aa12.89□□□□□ -0.35
PRKN-205ENST00000366897 LHFPL3Q86UP9 236 aa12.89□□□□□ -0.35
PRKN-205ENST00000366897 PROKR2Q8NFJ6 384 aa12.89□□□□□ -0.35
PRKN-205ENST00000366897 GRPEL2Q8TAA5 225 aa12.89□□□□□ -0.35
PRKN-205ENST00000366897 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.89□□□□□ -0.35
PRKN-205ENST00000366897 ZNF480Q8WV37 535 aa12.89□□□□□ -0.35
PRKN-205ENST00000366897 PCNPQ8WW12 178 aaKnown RBP12.89□□□□□ -0.35
PRKN-205ENST00000366897 BRF2Q9HAW0 419 aa12.89□□□□□ -0.35
PRKN-205ENST00000366897 FAM240BA0A1B0GVZ2 78 aa12.88□□□□□ -0.35
PRKN-205ENST00000366897 A0A1W2PQ72 361 aa12.88□□□□□ -0.35
PRKN-205ENST00000366897 ADAP00813 363 aa12.88□□□□□ -0.35
PRKN-205ENST00000366897 IFNA14P01570 189 aa12.88□□□□□ -0.35
PRKN-205ENST00000366897 OR12D1P0DN82 309 aa12.88□□□□□ -0.35
PRKN-205ENST00000366897 CST5P28325 142 aaPredicted RBP12.88□□□□□ -0.35
PRKN-205ENST00000366897 UQCRC1P31930 480 aa12.88□□□□□ -0.35
PRKN-205ENST00000366897 SNRPGP62308 76 aaKnown RBP12.88□□□□□ -0.35
PRKN-205ENST00000366897 SNRPD1P62314 119 aaKnown RBP12.88□□□□□ -0.35
PRKN-205ENST00000366897 MAP4K2Q12851 820 aa12.88□□□□□ -0.35
PRKN-205ENST00000366897 ILKQ13418 452 aa12.88□□□□□ -0.35
PRKN-205ENST00000366897 IL18Q14116 193 aa12.88□□□□□ -0.35
PRKN-205ENST00000366897 GINS1Q14691 196 aa12.88□□□□□ -0.35
PRKN-205ENST00000366897 NCF4Q15080 339 aa12.88□□□□□ -0.35
PRKN-205ENST00000366897 LCN1P1Q5VSP4 162 aa12.88□□□□□ -0.35
PRKN-205ENST00000366897 SIGIRRQ6IA17 410 aa12.88□□□□□ -0.35
PRKN-205ENST00000366897 SLC8B1Q6J4K2 584 aa12.88□□□□□ -0.35
PRKN-205ENST00000366897 REEP3Q6NUK4 255 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms