RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 ZNF19P17023 458 aa11.51□□□□□ -0.57
CDC42BPA-203ENST00000366766 ETV3P41162 512 aa11.51□□□□□ -0.57
CDC42BPA-203ENST00000366766 MAP2K3P46734 347 aa11.51□□□□□ -0.57
CDC42BPA-203ENST00000366766 TEAD2Q15562 447 aa11.51□□□□□ -0.57
CDC42BPA-203ENST00000366766 EXOC3L2Q2M3D2 409 aa11.51□□□□□ -0.57
CDC42BPA-203ENST00000366766 CATSPEREQ5SY80 951 aa11.51□□□□□ -0.57
CDC42BPA-203ENST00000366766 OR4K3Q96R72 315 aa11.51□□□□□ -0.57
CDC42BPA-203ENST00000366766 PNO1Q9NRX1 252 aaKnown RBP11.51□□□□□ -0.57
CDC42BPA-203ENST00000366766 CSTBP04080 98 aaKnown RBP11.51□□□□□ -0.57
CDC42BPA-203ENST00000366766 POMZP3Q6PJE2 187 aa11.51□□□□□ -0.57
CDC42BPA-203ENST00000366766 MAPK15Q8TD08 544 aa11.51□□□□□ -0.57
CDC42BPA-203ENST00000366766 OR51I1Q9H343 314 aa11.51□□□□□ -0.57
CDC42BPA-203ENST00000366766 TDRD15B5MCY1 1934 aaKnown RBP11.51□□□□□ -0.57
CDC42BPA-203ENST00000366766 LOC285095A0A1B0GVY8 99 aa11.51□□□□□ -0.57
CDC42BPA-203ENST00000366766 ELK4P28324 431 aa11.51□□□□□ -0.57
CDC42BPA-203ENST00000366766 GCGRP47871 477 aa11.51□□□□□ -0.57
CDC42BPA-203ENST00000366766 AKR1D1P51857 326 aa11.51□□□□□ -0.57
CDC42BPA-203ENST00000366766 SLC3A1Q07837 685 aa11.51□□□□□ -0.57
CDC42BPA-203ENST00000366766 JAGN1Q8N5M9 183 aa11.51□□□□□ -0.57
CDC42BPA-203ENST00000366766 TMEM203Q969S6 136 aa11.51□□□□□ -0.57
CDC42BPA-203ENST00000366766 GSTO2Q9H4Y5 243 aa11.51□□□□□ -0.57
CDC42BPA-203ENST00000366766 SLC6A9P48067 706 aa11.51□□□□□ -0.57
CDC42BPA-203ENST00000366766 SOX4Q06945 474 aaPredicted RBP11.51□□□□□ -0.57
CDC42BPA-203ENST00000366766 UNQ6126/PRO20091Q6UXV3 157 aa11.51□□□□□ -0.57
CDC42BPA-203ENST00000366766 LARP4Q71RC2 724 aaKnown RBP eCLIP11.51□□□□□ -0.573e-6■■□□□ 13.3
CDC42BPA-203ENST00000366766 ASCC1Q8N9N2 400 aaKnown RBP11.51□□□□□ -0.57
CDC42BPA-203ENST00000366766 CCDC115Q96NT0 180 aa11.51□□□□□ -0.57
CDC42BPA-203ENST00000366766 NSUN5Q96P11 429 aaKnown RBP11.51□□□□□ -0.57
CDC42BPA-203ENST00000366766 MS4A4EQ96PG1 132 aa11.51□□□□□ -0.57
CDC42BPA-203ENST00000366766 KATNBL1Q9H079 304 aa11.51□□□□□ -0.57
CDC42BPA-203ENST00000366766 NAP1L6A6NFF2 107 aa11.5□□□□□ -0.57
CDC42BPA-203ENST00000366766 INMT-MINDY4F8WBC2 141 aa11.5□□□□□ -0.57
CDC42BPA-203ENST00000366766 SEC13P55735 322 aa11.5□□□□□ -0.57
CDC42BPA-203ENST00000366766 ZNF101Q8IZC7 436 aa11.5□□□□□ -0.57
CDC42BPA-203ENST00000366766 SGCDQ92629 289 aa11.5□□□□□ -0.57
CDC42BPA-203ENST00000366766 A0A0J9YVX5 310 aa11.5□□□□□ -0.57
CDC42BPA-203ENST00000366766 MEGF11A6BM72 1044 aa11.5□□□□□ -0.57
CDC42BPA-203ENST00000366766 CELP19835 753 aa11.5□□□□□ -0.57
CDC42BPA-203ENST00000366766 OR4K1Q8NGD4 311 aa11.5□□□□□ -0.57
CDC42BPA-203ENST00000366766 OR52B6Q8NGF0 335 aa11.5□□□□□ -0.57
CDC42BPA-203ENST00000366766 ABCD2Q9UBJ2 740 aa11.5□□□□□ -0.57
CDC42BPA-203ENST00000366766 SOCS2O14508 198 aa11.5□□□□□ -0.57
CDC42BPA-203ENST00000366766 ITGA3P26006 1051 aa11.5□□□□□ -0.57
CDC42BPA-203ENST00000366766 CPZQ66K79 652 aa11.5□□□□□ -0.57
CDC42BPA-203ENST00000366766 ZNF615Q8N8J6 731 aa11.5□□□□□ -0.57
CDC42BPA-203ENST00000366766 NUP43Q8NFH3 380 aa11.5□□□□□ -0.57
CDC42BPA-203ENST00000366766 ZBED3Q96IU2 234 aaPredicted RBP11.5□□□□□ -0.57
CDC42BPA-203ENST00000366766 WACQ9BTA9 647 aa11.5□□□□□ -0.57
CDC42BPA-203ENST00000366766 A6NHS1 94 aa11.5□□□□□ -0.57
CDC42BPA-203ENST00000366766 H7BY64 318 aa11.5□□□□□ -0.57
CDC42BPA-203ENST00000366766 NME4O00746 187 aa11.5□□□□□ -0.57
CDC42BPA-203ENST00000366766 GNG2P59768 71 aa11.5□□□□□ -0.57
CDC42BPA-203ENST00000366766 GGTA1PQ4G0N0 100 aa11.5□□□□□ -0.57
CDC42BPA-203ENST00000366766 ZNF431Q8TF32 576 aaPredicted RBP11.5□□□□□ -0.57
CDC42BPA-203ENST00000366766 NSMAFQ92636 917 aa11.5□□□□□ -0.57
CDC42BPA-203ENST00000366766 PRAP1Q96NZ9 151 aa11.5□□□□□ -0.57
CDC42BPA-203ENST00000366766 FUNDC2Q9BWH2 189 aa11.5□□□□□ -0.57
CDC42BPA-203ENST00000366766 MARCH4Q9P2E8 410 aaPredicted RBP11.5□□□□□ -0.57
CDC42BPA-203ENST00000366766 CREBL2O60519 120 aaPredicted RBP11.5□□□□□ -0.57
CDC42BPA-203ENST00000366766 BPIP17213 487 aa11.5□□□□□ -0.57
CDC42BPA-203ENST00000366766 ZNF140P52738 457 aaPredicted RBP11.5□□□□□ -0.57
CDC42BPA-203ENST00000366766 PRPS1P60891 318 aa11.5□□□□□ -0.57
CDC42BPA-203ENST00000366766 MRPS10P82664 201 aaKnown RBP11.5□□□□□ -0.57
CDC42BPA-203ENST00000366766 ERLEC1Q96DZ1 483 aa11.5□□□□□ -0.57
CDC42BPA-203ENST00000366766 FBP2O00757 339 aa11.5□□□□□ -0.57
CDC42BPA-203ENST00000366766 ZNF8P17098 575 aaPredicted RBP11.5□□□□□ -0.57
CDC42BPA-203ENST00000366766 TAS2R38P59533 333 aa11.5□□□□□ -0.57
CDC42BPA-203ENST00000366766 OCLNQ16625 522 aa11.5□□□□□ -0.57
CDC42BPA-203ENST00000366766 LIPKQ5VXJ0 399 aa11.5□□□□□ -0.57
CDC42BPA-203ENST00000366766 MTHFD2LQ9H903 347 aaPredicted RBP11.5□□□□□ -0.57
CDC42BPA-203ENST00000366766 CD68P34810 354 aaPredicted RBP11.5□□□□□ -0.57
CDC42BPA-203ENST00000366766 HK3P52790 923 aa11.5□□□□□ -0.57
CDC42BPA-203ENST00000366766 KDELC1Q6UW63 502 aa11.5□□□□□ -0.57
CDC42BPA-203ENST00000366766 ZNF767PQ75MW2 155 aa11.5□□□□□ -0.57
CDC42BPA-203ENST00000366766 OR4K17Q8NGC6 315 aa11.5□□□□□ -0.57
CDC42BPA-203ENST00000366766 CD200R1Q8TD46 325 aa11.5□□□□□ -0.57
CDC42BPA-203ENST00000366766 ACTRT3Q9BYD9 372 aa11.5□□□□□ -0.57
CDC42BPA-203ENST00000366766 TIGARQ9NQ88 270 aa11.5□□□□□ -0.57
CDC42BPA-203ENST00000366766 GDE1Q9NZC3 331 aa11.5□□□□□ -0.57
CDC42BPA-203ENST00000366766 KLRF1Q9NZS2 232 aa11.5□□□□□ -0.57
CDC42BPA-203ENST00000366766 MARF1Q9Y4F3 1742 aaKnown RBP11.5□□□□□ -0.57
CDC42BPA-203ENST00000366766 OSMP13725 252 aa11.5□□□□□ -0.57
CDC42BPA-203ENST00000366766 GXYLT1Q4G148 440 aa11.5□□□□□ -0.57
CDC42BPA-203ENST00000366766 RBM12BQ8IXT5 1001 aaKnown RBP11.5□□□□□ -0.57
CDC42BPA-203ENST00000366766 L7N2F9 121 aa11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 PTGS2P35354 604 aa11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 LHFPL3Q86UP9 236 aa11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 SFXN5Q8TD22 340 aa11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 ENTPD2Q9Y5L3 495 aa11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 USP3Q9Y6I4 520 aa11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 DRGXA6NNA5 263 aa11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 J3QRK9 145 aa11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 SOX14O95416 240 aa11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 IL7P13232 177 aa11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 VAMP2P63027 116 aa11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 CD83Q01151 205 aa11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 OR4E2Q8NGC2 313 aa11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 TMEM125Q96AQ2 219 aa11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 SCLYQ96I15 445 aa11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 SECISBP2Q96T21 854 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms