RNA–Protein interactions for RNA: ENST00000366747.7

MRPL55-218, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-218ENST00000366747 XKP51811 444 aa13.59□□□□□ -0.23
MRPL55-218ENST00000366747 HK2P52789 917 aa13.59□□□□□ -0.23
MRPL55-218ENST00000366747 FOXA1P55317 472 aa13.59□□□□□ -0.23
MRPL55-218ENST00000366747 HMGCS1Q01581 520 aa13.59□□□□□ -0.23
MRPL55-218ENST00000366747 NR6A1Q15406 480 aa13.59□□□□□ -0.23
MRPL55-218ENST00000366747 TNFAIP8L3Q5GJ75 292 aa13.59□□□□□ -0.23
MRPL55-218ENST00000366747 CEP85LQ5SZL2 805 aa13.59□□□□□ -0.23
MRPL55-218ENST00000366747 FHL5Q5TD97 284 aa13.59□□□□□ -0.23
MRPL55-218ENST00000366747 SPINK14Q6IE38 97 aa13.59□□□□□ -0.23
MRPL55-218ENST00000366747 OPN5Q6U736 354 aa13.59□□□□□ -0.23
MRPL55-218ENST00000366747 RNF111Q6ZNA4 994 aa13.59□□□□□ -0.23
MRPL55-218ENST00000366747 SLC29A4Q7RTT9 530 aa13.59□□□□□ -0.23
MRPL55-218ENST00000366747 KIRREL3Q8IZU9 778 aa13.59□□□□□ -0.23
MRPL55-218ENST00000366747 CYP4Z2PQ8N1L4 340 aa13.59□□□□□ -0.23
MRPL55-218ENST00000366747 GOLM1Q8NBJ4 401 aa13.59□□□□□ -0.23
MRPL55-218ENST00000366747 OR7G1Q8NGA0 311 aa13.59□□□□□ -0.23
MRPL55-218ENST00000366747 SLC22A8Q8TCC7 542 aa13.59□□□□□ -0.23
MRPL55-218ENST00000366747 ASB15Q8WXK1 588 aa13.59□□□□□ -0.23
MRPL55-218ENST00000366747 SGCZQ96LD1 299 aa13.59□□□□□ -0.23
MRPL55-218ENST00000366747 TAAR6Q96RI8 345 aa13.59□□□□□ -0.23
MRPL55-218ENST00000366747 C12orf65Q9H3J6 166 aaKnown RBP13.59□□□□□ -0.23
MRPL55-218ENST00000366747 CXorf21Q9HAI6 301 aa13.59□□□□□ -0.23
MRPL55-218ENST00000366747 TIMMDC1Q9NPL8 285 aa13.59□□□□□ -0.23
MRPL55-218ENST00000366747 HPF1Q9NWY4 346 aa13.59□□□□□ -0.23
MRPL55-218ENST00000366747 CES1P1Q9UKY3 287 aa13.59□□□□□ -0.23
MRPL55-218ENST00000366747 CFL2Q9Y281 166 aa13.59□□□□□ -0.23
MRPL55-218ENST00000366747 ZNF780BQ9Y6R6 833 aa13.59□□□□□ -0.23
MRPL55-218ENST00000366747 TMEM200CA6NKL6 621 aa13.58□□□□□ -0.24
MRPL55-218ENST00000366747 KLRC4-KLRK1H3BQV0 150 aa13.58□□□□□ -0.24
MRPL55-218ENST00000366747 PGRMC2O15173 223 aa13.58□□□□□ -0.24
MRPL55-218ENST00000366747 RGS14O43566 566 aa13.58□□□□□ -0.24
MRPL55-218ENST00000366747 SPAG7O75391 227 aa13.58□□□□□ -0.24
MRPL55-218ENST00000366747 OR2J2O76002 312 aa13.58□□□□□ -0.24
MRPL55-218ENST00000366747 CHN1P15882 459 aa13.58□□□□□ -0.24
MRPL55-218ENST00000366747 ETV4P43268 484 aa13.58□□□□□ -0.24
MRPL55-218ENST00000366747 ERVK-8P63133 956 aa13.58□□□□□ -0.24
MRPL55-218ENST00000366747 ZNF763Q0D2J5 394 aa13.58□□□□□ -0.24
MRPL55-218ENST00000366747 FUT7Q11130 342 aa13.58□□□□□ -0.24
MRPL55-218ENST00000366747 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.58□□□□□ -0.24
MRPL55-218ENST00000366747 SPDYAQ5MJ70 313 aa13.58□□□□□ -0.24
MRPL55-218ENST00000366747 IKBIPQ70UQ0 350 aa13.58□□□□□ -0.24
MRPL55-218ENST00000366747 CLYBLQ8N0X4 340 aa13.58□□□□□ -0.24
MRPL55-218ENST00000366747 C17orf47Q8NEP4 570 aa13.58□□□□□ -0.24
MRPL55-218ENST00000366747 THAP3Q8WTV1 239 aaPredicted RBP13.58□□□□□ -0.24
MRPL55-218ENST00000366747 PPWD1Q96BP3 646 aaKnown RBP13.58□□□□□ -0.24
MRPL55-218ENST00000366747 ERP27Q96DN0 273 aa13.58□□□□□ -0.24
MRPL55-218ENST00000366747 APIPQ96GX9 242 aa13.58□□□□□ -0.24
MRPL55-218ENST00000366747 PKNOX2Q96KN3 472 aa13.58□□□□□ -0.24
MRPL55-218ENST00000366747 ZIM3Q96PE6 472 aa13.58□□□□□ -0.24
MRPL55-218ENST00000366747 RASL10BQ96S79 203 aa13.58□□□□□ -0.24
MRPL55-218ENST00000366747 CCT7Q99832 543 aa13.58□□□□□ -0.24
MRPL55-218ENST00000366747 CNPPD1Q9BV87 410 aa13.58□□□□□ -0.24
MRPL55-218ENST00000366747 GIMAP4Q9NUV9 329 aa13.58□□□□□ -0.24
MRPL55-218ENST00000366747 ANKRD10Q9NXR5 420 aa13.58□□□□□ -0.24
MRPL55-218ENST00000366747 SLC17A7Q9P2U7 560 aa13.58□□□□□ -0.24
MRPL55-218ENST00000366747 ERVK-19Q9WJR5 959 aa13.58□□□□□ -0.24
MRPL55-218ENST00000366747 GCN1Q92616 2671 aaKnown RBP13.57□□□□□ -0.24
MRPL55-218ENST00000366747 MYOCOSA0A1B0GUC4 107 aa13.57□□□□□ -0.24
MRPL55-218ENST00000366747 BIRC5O15392 142 aa13.57□□□□□ -0.24
MRPL55-218ENST00000366747 PRKNO60260 465 aaPredicted RBP13.57□□□□□ -0.24
MRPL55-218ENST00000366747 ZWINTO95229 277 aa13.57□□□□□ -0.24
MRPL55-218ENST00000366747 BPGMP07738 259 aa13.57□□□□□ -0.24
MRPL55-218ENST00000366747 ANXA4P09525 319 aaPredicted RBP13.57□□□□□ -0.24
MRPL55-218ENST00000366747 UQCRFS1P47985 274 aa13.57□□□□□ -0.24
MRPL55-218ENST00000366747 TDGF1P3P51864 188 aa13.57□□□□□ -0.24
MRPL55-218ENST00000366747 SLC37A1P57057 533 aa13.57□□□□□ -0.24
MRPL55-218ENST00000366747 RAE1P78406 368 aaKnown RBP13.57□□□□□ -0.24
MRPL55-218ENST00000366747 UBAP2LQ14157 1087 aaKnown RBP13.57□□□□□ -0.24
MRPL55-218ENST00000366747 ZNF267Q14586 743 aaPredicted RBP13.57□□□□□ -0.24
MRPL55-218ENST00000366747 KRTCAP3Q53RY4 240 aa13.57□□□□□ -0.24
MRPL55-218ENST00000366747 PIGGQ5H8A4 983 aa13.57□□□□□ -0.24
MRPL55-218ENST00000366747 ZNF468Q5VIY5 522 aaPredicted RBP13.57□□□□□ -0.24
MRPL55-218ENST00000366747 KANK2Q63ZY3 851 aa13.57□□□□□ -0.24
MRPL55-218ENST00000366747 BNC2Q6ZN30 1099 aaPredicted RBP13.57□□□□□ -0.24
MRPL55-218ENST00000366747 GALNTL5Q7Z4T8 443 aa13.57□□□□□ -0.24
MRPL55-218ENST00000366747 C9orf40Q8IXQ3 194 aa13.57□□□□□ -0.24
MRPL55-218ENST00000366747 TP53INP1Q96A56 240 aa13.57□□□□□ -0.24
MRPL55-218ENST00000366747 KLHL29Q96CT2 875 aa13.57□□□□□ -0.24
MRPL55-218ENST00000366747 FRMD6Q96NE9 622 aa13.57□□□□□ -0.24
MRPL55-218ENST00000366747 PFDN4Q9NQP4 134 aa13.57□□□□□ -0.24
MRPL55-218ENST00000366747 KLHL1Q9NR64 748 aa13.57□□□□□ -0.24
MRPL55-218ENST00000366747 ERVK-11Q9UQG0 969 aa13.57□□□□□ -0.24
MRPL55-218ENST00000366747 DLGAP4Q9Y2H0 992 aa13.57□□□□□ -0.24
MRPL55-218ENST00000366747 TMED5Q9Y3A6 229 aa13.57□□□□□ -0.24
MRPL55-218ENST00000366747 NBASA2RRP1 2371 aa13.57□□□□□ -0.24
MRPL55-218ENST00000366747 SHANK1Q9Y566 2161 aa13.56□□□□□ -0.24
MRPL55-218ENST00000366747 CAPN14A8MX76 684 aa13.56□□□□□ -0.24
MRPL55-218ENST00000366747 WWP2O00308 870 aa13.56□□□□□ -0.24
MRPL55-218ENST00000366747 SLITRK5O94991 958 aa13.56□□□□□ -0.24
MRPL55-218ENST00000366747 IL3P08700 152 aa13.56□□□□□ -0.24
MRPL55-218ENST00000366747 NT5EP21589 574 aa13.56□□□□□ -0.24
MRPL55-218ENST00000366747 ALDH9A1P49189 494 aa13.56□□□□□ -0.24
MRPL55-218ENST00000366747 MAP4K2Q12851 820 aa13.56□□□□□ -0.24
MRPL55-218ENST00000366747 MRPL49Q13405 166 aaKnown RBP13.56□□□□□ -0.24
MRPL55-218ENST00000366747 EBPQ15125 230 aaKnown RBP13.56□□□□□ -0.24
MRPL55-218ENST00000366747 CEBPEQ15744 281 aa13.56□□□□□ -0.24
MRPL55-218ENST00000366747 MAPKAPK3Q16644 382 aa13.56□□□□□ -0.24
MRPL55-218ENST00000366747 ARL13AQ5H913 290 aaPredicted RBP13.56□□□□□ -0.24
MRPL55-218ENST00000366747 DGAT2L6Q6ZPD8 337 aa13.56□□□□□ -0.24
MRPL55-218ENST00000366747 RTL4Q6ZR62 310 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms