RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 FDCSPQ8NFU4 85 aa10.6□□□□□ -0.71
CSNK1E-202ENST00000366216 NUDT8Q8WV74 236 aa10.6□□□□□ -0.71
CSNK1E-202ENST00000366216 COQ8BQ96D53 544 aa10.6□□□□□ -0.71
CSNK1E-202ENST00000366216 MTERF3Q96E29 417 aa10.6□□□□□ -0.71
CSNK1E-202ENST00000366216 OR2A14Q96R47 310 aa10.6□□□□□ -0.71
CSNK1E-202ENST00000366216 PRPF18Q99633 342 aaKnown RBP10.6□□□□□ -0.71
CSNK1E-202ENST00000366216 SH3GL1Q99961 368 aa10.6□□□□□ -0.71
CSNK1E-202ENST00000366216 SLC39A3Q9BRY0 314 aa10.6□□□□□ -0.71
CSNK1E-202ENST00000366216 NUDT9Q9BW91 350 aa10.6□□□□□ -0.71
CSNK1E-202ENST00000366216 MUC13Q9H3R2 512 aa10.6□□□□□ -0.71
CSNK1E-202ENST00000366216 EPB41L1Q9H4G0 881 aa10.6□□□□□ -0.71
CSNK1E-202ENST00000366216 NANOGQ9H9S0 305 aa10.6□□□□□ -0.71
CSNK1E-202ENST00000366216 UCK1Q9HA47 277 aa10.6□□□□□ -0.71
CSNK1E-202ENST00000366216 S100A14Q9HCY8 104 aa10.6□□□□□ -0.71
CSNK1E-202ENST00000366216 FAM120CQ9NX05 1096 aaKnown RBP10.6□□□□□ -0.71
CSNK1E-202ENST00000366216 ACTR10Q9NZ32 417 aa10.6□□□□□ -0.71
CSNK1E-202ENST00000366216 SLAMF8Q9P0V8 285 aa10.6□□□□□ -0.71
CSNK1E-202ENST00000366216 PACSIN3Q9UKS6 424 aa10.6□□□□□ -0.71
CSNK1E-202ENST00000366216 L3MBTL1Q9Y468 752 aa10.6□□□□□ -0.71
CSNK1E-202ENST00000366216 AP1M2Q9Y6Q5 423 aa10.6□□□□□ -0.71
CSNK1E-202ENST00000366216 SNRNP200O75643 2136 aaKnown RBP10.6□□□□□ -0.71
CSNK1E-202ENST00000366216 TRBV5-3A0A0A0MS03 114 aa10.59□□□□□ -0.71
CSNK1E-202ENST00000366216 GNG14A0A1W2PPG7 69 aa10.59□□□□□ -0.71
CSNK1E-202ENST00000366216 C2orf74A8MZ97 194 aa10.59□□□□□ -0.71
CSNK1E-202ENST00000366216 PLPP1O14494 284 aa10.59□□□□□ -0.71
CSNK1E-202ENST00000366216 HAT1O14929 419 aa10.59□□□□□ -0.71
CSNK1E-202ENST00000366216 LRRTM2O43300 516 aa10.59□□□□□ -0.71
CSNK1E-202ENST00000366216 AKAP10O43572 662 aa10.59□□□□□ -0.71
CSNK1E-202ENST00000366216 KIF1CO43896 1103 aaKnown RBP10.59□□□□□ -0.71
CSNK1E-202ENST00000366216 SCN2BO60939 215 aa10.59□□□□□ -0.71
CSNK1E-202ENST00000366216 SH3BGRLO75368 114 aa10.59□□□□□ -0.71
CSNK1E-202ENST00000366216 KLHL18O94889 574 aa10.59□□□□□ -0.71
CSNK1E-202ENST00000366216 LRATO95237 230 aa10.59□□□□□ -0.71
CSNK1E-202ENST00000366216 KLK1P06870 262 aa10.59□□□□□ -0.71
CSNK1E-202ENST00000366216 FGF5P12034 268 aa10.59□□□□□ -0.71
CSNK1E-202ENST00000366216 COX7A2P14406 83 aa10.59□□□□□ -0.71
CSNK1E-202ENST00000366216 UGT2B7P16662 529 aa10.59□□□□□ -0.71
CSNK1E-202ENST00000366216 HOXB9P17482 250 aaPredicted RBP10.59□□□□□ -0.71
CSNK1E-202ENST00000366216 GCKP35557 465 aa10.59□□□□□ -0.71
CSNK1E-202ENST00000366216 BSGP35613 385 aa10.59□□□□□ -0.71
CSNK1E-202ENST00000366216 BCL6P41182 706 aa10.59□□□□□ -0.71
CSNK1E-202ENST00000366216 GRIA3P42263 894 aa10.59□□□□□ -0.71
CSNK1E-202ENST00000366216 SEPHS1P49903 392 aa10.59□□□□□ -0.71
CSNK1E-202ENST00000366216 WNT3P56703 355 aa10.59□□□□□ -0.71
CSNK1E-202ENST00000366216 RPS15AP62244 130 aaKnown RBP10.59□□□□□ -0.71
CSNK1E-202ENST00000366216 AP2B1P63010 937 aa10.59□□□□□ -0.71
CSNK1E-202ENST00000366216 PDE7AQ13946 482 aa10.59□□□□□ -0.71
CSNK1E-202ENST00000366216 RCN1Q15293 331 aa10.59□□□□□ -0.71
CSNK1E-202ENST00000366216 FXNQ16595 210 aa10.59□□□□□ -0.71
CSNK1E-202ENST00000366216 SLC5A12Q1EHB4 618 aa10.59□□□□□ -0.71
CSNK1E-202ENST00000366216 HKDC1Q2TB90 917 aa10.59□□□□□ -0.71
CSNK1E-202ENST00000366216 PGS1Q32NB8 556 aa10.59□□□□□ -0.71
CSNK1E-202ENST00000366216 ADPRMQ3LIE5 342 aa10.59□□□□□ -0.71
CSNK1E-202ENST00000366216 ANXA8L1Q5VT79 327 aa10.59□□□□□ -0.71
CSNK1E-202ENST00000366216 FAM69BQ5VUD6 431 aa10.59□□□□□ -0.71
CSNK1E-202ENST00000366216 FAM71E1Q6IPT2 247 aa10.59□□□□□ -0.71
CSNK1E-202ENST00000366216 ZFP1Q6P2D0 407 aa10.59□□□□□ -0.71
CSNK1E-202ENST00000366216 R3HCC1LQ7Z5L2 792 aaKnown RBP10.59□□□□□ -0.71
CSNK1E-202ENST00000366216 RNF148Q8N7C7 305 aa10.59□□□□□ -0.71
CSNK1E-202ENST00000366216 DNAJB14Q8TBM8 379 aa10.59□□□□□ -0.71
CSNK1E-202ENST00000366216 C16orf78Q8WTQ4 265 aa10.59□□□□□ -0.71
CSNK1E-202ENST00000366216 ZUFSPQ96AP4 578 aa10.59□□□□□ -0.71
CSNK1E-202ENST00000366216 RGMAQ96B86 450 aa10.59□□□□□ -0.71
CSNK1E-202ENST00000366216 THAP11Q96EK4 314 aa10.59□□□□□ -0.71
CSNK1E-202ENST00000366216 ANKRD27Q96NW4 1050 aa10.59□□□□□ -0.71
CSNK1E-202ENST00000366216 ZNF717Q9BY31 904 aaPredicted RBP10.59□□□□□ -0.71
CSNK1E-202ENST00000366216 BHLHE41Q9C0J9 482 aaPredicted RBP10.59□□□□□ -0.71
CSNK1E-202ENST00000366216 REXO4Q9GZR2 422 aaKnown RBP10.59□□□□□ -0.71
CSNK1E-202ENST00000366216 PAIP1Q9H074 479 aaKnown RBP10.59□□□□□ -0.71
CSNK1E-202ENST00000366216 REEP4Q9H6H4 257 aa10.59□□□□□ -0.71
CSNK1E-202ENST00000366216 SERHLQ9NQF3 203 aa10.59□□□□□ -0.71
CSNK1E-202ENST00000366216 NKX1-2Q9UD57 310 aaPredicted RBP10.59□□□□□ -0.71
CSNK1E-202ENST00000366216 ZNF469Q96JG9 3925 aaPredicted RBP10.58□□□□□ -0.72
CSNK1E-202ENST00000366216 OR2A25A4D2G3 310 aa10.58□□□□□ -0.72
CSNK1E-202ENST00000366216 OR6C74A6NCV1 312 aa10.58□□□□□ -0.72
CSNK1E-202ENST00000366216 LRIT2A6NDA9 550 aa10.58□□□□□ -0.72
CSNK1E-202ENST00000366216 A6NL46 340 aa10.58□□□□□ -0.72
CSNK1E-202ENST00000366216 GABRR3A8MPY1 467 aa10.58□□□□□ -0.72
CSNK1E-202ENST00000366216 SAP18O00422 153 aaKnown RBP10.58□□□□□ -0.72
CSNK1E-202ENST00000366216 TOX3O15405 576 aaPredicted RBP10.58□□□□□ -0.72
CSNK1E-202ENST00000366216 NDUFS4O43181 175 aa10.58□□□□□ -0.72
CSNK1E-202ENST00000366216 TBX19O60806 448 aa10.58□□□□□ -0.72
CSNK1E-202ENST00000366216 ZG16O60844 167 aa10.58□□□□□ -0.72
CSNK1E-202ENST00000366216 STAMBPO95630 424 aa10.58□□□□□ -0.72
CSNK1E-202ENST00000366216 C9P02748 559 aa10.58□□□□□ -0.72
CSNK1E-202ENST00000366216 PIM1P11309 404 aaPredicted RBP10.58□□□□□ -0.72
CSNK1E-202ENST00000366216 DDX5P17844 614 aaKnown RBP10.58□□□□□ -0.72
CSNK1E-202ENST00000366216 POLR2CP19387 275 aaPredicted RBP10.58□□□□□ -0.72
CSNK1E-202ENST00000366216 ITGA3P26006 1051 aa10.58□□□□□ -0.72
CSNK1E-202ENST00000366216 HTR1EP28566 365 aa10.58□□□□□ -0.72
CSNK1E-202ENST00000366216 TPP2P29144 1249 aaPredicted RBP10.58□□□□□ -0.72
CSNK1E-202ENST00000366216 RPS15P62841 145 aaKnown RBP10.58□□□□□ -0.72
CSNK1E-202ENST00000366216 TRA2BP62995 288 aaKnown RBP10.58□□□□□ -0.72
CSNK1E-202ENST00000366216 SLC34A1Q06495 639 aa10.58□□□□□ -0.72
CSNK1E-202ENST00000366216 TESK1Q15569 626 aa10.58□□□□□ -0.72
CSNK1E-202ENST00000366216 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.58□□□□□ -0.72
CSNK1E-202ENST00000366216 RUNDC3AQ59EK9 446 aa10.58□□□□□ -0.72
CSNK1E-202ENST00000366216 C6orf10Q5SRN2 563 aa10.58□□□□□ -0.72
CSNK1E-202ENST00000366216 CPTPQ5TA50 214 aa10.58□□□□□ -0.72
CSNK1E-202ENST00000366216 OR4F3Q6IEY1 312 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms