RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 TEKT3Q9BXF9 490 aa-0.39□□□□□ -2.47
RNU6-54P-201ENST00000365563 FAM129AQ9BZQ8 928 aa-0.39□□□□□ -2.47
RNU6-54P-201ENST00000365563 WDR12Q9GZL7 423 aaKnown RBP-0.39□□□□□ -2.47
RNU6-54P-201ENST00000365563 LHX5Q9H2C1 402 aa-0.39□□□□□ -2.47
RNU6-54P-201ENST00000365563 NLRC4Q9NPP4 1024 aa-0.39□□□□□ -2.47
RNU6-54P-201ENST00000365563 GSN-AS1Q9NRJ2 163 aa-0.39□□□□□ -2.47
RNU6-54P-201ENST00000365563 TBC1D22BQ9NU19 505 aa-0.39□□□□□ -2.47
RNU6-54P-201ENST00000365563 SETD4Q9NVD3 440 aa-0.39□□□□□ -2.47
RNU6-54P-201ENST00000365563 EHD2Q9NZN4 543 aa-0.39□□□□□ -2.47
RNU6-54P-201ENST00000365563 LARSQ9P2J5 1176 aaKnown RBP-0.39□□□□□ -2.47
RNU6-54P-201ENST00000365563 CRNNQ9UBG3 495 aaPredicted RBP-0.39□□□□□ -2.47
RNU6-54P-201ENST00000365563 SEC14L4Q9UDX3 406 aa-0.39□□□□□ -2.47
RNU6-54P-201ENST00000365563 RPS6KA6Q9UK32 745 aa-0.39□□□□□ -2.47
RNU6-54P-201ENST00000365563 ABT1Q9ULW3 272 aaKnown RBP-0.39□□□□□ -2.47
RNU6-54P-201ENST00000365563 TBX20Q9UMR3 447 aa-0.39□□□□□ -2.47
RNU6-54P-201ENST00000365563 EXOC6BQ9Y2D4 811 aa-0.39□□□□□ -2.47
RNU6-54P-201ENST00000365563 RPH3AQ9Y2J0 694 aaPredicted RBP-0.39□□□□□ -2.47
RNU6-54P-201ENST00000365563 PADI2Q9Y2J8 665 aa-0.39□□□□□ -2.47
RNU6-54P-201ENST00000365563 RIPOR2Q9Y4F9 1068 aa-0.39□□□□□ -2.47
RNU6-54P-201ENST00000365563 LRRK1Q38SD2 2015 aa-0.39□□□□□ -2.47
RNU6-54P-201ENST00000365563 SHANK1Q9Y566 2161 aa-0.39□□□□□ -2.47
RNU6-54P-201ENST00000365563 DOCK9Q9BZ29 2069 aa-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 A0A0J9YXY3 114 aa-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 PI4KAP2A4QPH2 592 aa-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 TMEM221A6NGB7 291 aa-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 FBLL1A6NHQ2 334 aaKnown RBP-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 A8MUU9 505 aa-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 C11orf94C9JXX5 98 aa-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 ANHXE9PGG2 379 aa-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 SLC17A2O00624 439 aa-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 ADAM12O43184 909 aa-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 CHST1O43916 411 aa-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 DUSP11O75319 330 aaKnown RBP-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 CREG1O75629 220 aa-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 GOT2P00505 430 aaKnown RBP-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 TIMP1P01033 207 aa-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 KRT18P05783 430 aaKnown RBP-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 PVRP15151 417 aa-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 TCN2P20062 427 aa-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 IGHV1-2P23083 117 aa-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 CD27P26842 260 aa-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 PON1P27169 355 aa-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 PRDX3P30048 256 aaKnown RBP-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 OTX2P32243 289 aa-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 CAMPP49913 170 aa-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 MTTPP55157 894 aa-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 BTG1P62324 171 aa-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 DEFB103AP81534 67 aa-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 OC90Q02509 493 aaPredicted RBP-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 PRKCDQ05655 676 aa-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 TMEM115Q12893 351 aaPredicted RBP-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 IKQ13123 557 aaPredicted RBP-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 IL18R1Q13478 541 aa-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 PICALMQ13492 652 aa-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 VEZF1Q14119 521 aa-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 EMC2Q15006 297 aa-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 KRT31Q15323 416 aa-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 NPTX1Q15818 432 aa-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 PIGGQ5H8A4 983 aa-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 ACER2Q5QJU3 275 aa-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 RABGAP1LQ5R372 815 aa-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 FAM120AOSQ5T036 256 aa-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 FBXW9Q5XUX1 488 aa-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 NEPROQ6NW34 567 aa-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 DCLRE1AQ6PJP8 1040 aa-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 CFAP77Q6ZQR2 320 aa-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 MSANTD1Q6ZTZ1 278 aa-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 FRA10AC1Q70Z53 315 aa-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 DZIP1Q86YF9 867 aaKnown RBP-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 MYLK4Q86YV6 388 aaPredicted RBP-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 UNC5CLQ8IV45 518 aa-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 MFN1Q8IWA4 741 aa-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 LAX1Q8IWV1 398 aa-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 C12orf56Q8IXR9 622 aa-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 GATSQ8NAP1 163 aa-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 CNNM3Q8NE01 707 aa-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 OR9A1PQ8NGU1 263 aa-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 OR1P1Q8NH06 330 aa-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 C7orf33Q8WU49 177 aa-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 DNAJA4Q8WW22 397 aaPredicted RBP-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 EXOSC8Q96B26 276 aaKnown RBP-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 FGGYQ96C11 551 aa-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 ZBTB10Q96DT7 871 aa-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 C1orf74Q96LT6 269 aa-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 OR2M2Q96R28 347 aa-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 OR2A14Q96R47 310 aa-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 GPR63Q9BZJ6 419 aa-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 IFI27L2Q9H2X8 130 aa-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 TMEM245Q9H330 911 aa-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 KCNK15Q9H427 330 aa-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 ACTL8Q9H568 366 aa-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 ZNF442Q9H7R0 627 aa-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 TMEM106BQ9NUM4 274 aa-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 PAG1Q9NWQ8 432 aa-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 EIF3KQ9UBQ5 218 aaKnown RBP-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 NRBP1Q9UHY1 535 aa-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 SF3B1O75533 1304 aaKnown RBP eCLIP-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 MAP3K15Q6ZN16 1313 aa-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 ZNF644Q9H582 1327 aaPredicted RBP-0.4□□□□□ -2.47
RNU6-54P-201ENST00000365563 PCLOQ9Y6V0 5065 aa-0.41□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms