RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 AGFG1P52594 562 aaKnown RBP12.09□□□□□ -0.47
VAMP1-201ENST00000361716 RPS26P62854 115 aaKnown RBP12.09□□□□□ -0.47
VAMP1-201ENST00000361716 SMAD3P84022 425 aaKnown RBP12.09□□□□□ -0.47
VAMP1-201ENST00000361716 MEF2AQ02078 507 aaPredicted RBP12.09□□□□□ -0.47
VAMP1-201ENST00000361716 COX20Q5RI15 118 aa12.09□□□□□ -0.47
VAMP1-201ENST00000361716 IFNL1Q8IU54 200 aa12.09□□□□□ -0.47
VAMP1-201ENST00000361716 OR11H7Q8NGC8 314 aa12.09□□□□□ -0.47
VAMP1-201ENST00000361716 HERVK_113Q902F9 699 aa12.09□□□□□ -0.47
VAMP1-201ENST00000361716 MRPS31Q92665 395 aaKnown RBP12.09□□□□□ -0.47
VAMP1-201ENST00000361716 SCRN2Q96FV2 425 aa12.09□□□□□ -0.47
VAMP1-201ENST00000361716 MYO19Q96H55 970 aa12.09□□□□□ -0.47
VAMP1-201ENST00000361716 DUSP26Q9BV47 211 aa12.09□□□□□ -0.47
VAMP1-201ENST00000361716 OR51J1Q9H342 316 aa12.09□□□□□ -0.47
VAMP1-201ENST00000361716 SDHAF2Q9NX18 166 aa12.09□□□□□ -0.47
VAMP1-201ENST00000361716 PTGFRNQ9P2B2 879 aa12.09□□□□□ -0.47
VAMP1-201ENST00000361716 ELF5Q9UKW6 265 aaPredicted RBP12.09□□□□□ -0.47
VAMP1-201ENST00000361716 MYLKQ15746 1914 aa12.09□□□□□ -0.47
VAMP1-201ENST00000361716 GABRR3A8MPY1 467 aa12.09□□□□□ -0.47
VAMP1-201ENST00000361716 PROM1O43490 865 aa12.09□□□□□ -0.47
VAMP1-201ENST00000361716 SMAD6O43541 496 aaKnown RBP12.09□□□□□ -0.47
VAMP1-201ENST00000361716 LANCL1O43813 399 aa12.09□□□□□ -0.47
VAMP1-201ENST00000361716 ALDOBP05062 364 aa12.09□□□□□ -0.47
VAMP1-201ENST00000361716 ANXA4P09525 319 aaPredicted RBP12.09□□□□□ -0.47
VAMP1-201ENST00000361716 CD3GP09693 182 aa12.09□□□□□ -0.47
VAMP1-201ENST00000361716 XKP51811 444 aa12.09□□□□□ -0.47
VAMP1-201ENST00000361716 ATP12AP54707 1039 aa12.09□□□□□ -0.47
VAMP1-201ENST00000361716 HEPACAMQ14CZ8 416 aa12.09□□□□□ -0.47
VAMP1-201ENST00000361716 KCNA10Q16322 511 aa12.09□□□□□ -0.47
VAMP1-201ENST00000361716 MPPE1Q53F39 396 aa12.09□□□□□ -0.47
VAMP1-201ENST00000361716 CPTPQ5TA50 214 aa12.09□□□□□ -0.47
VAMP1-201ENST00000361716 ZNF852Q6ZMS4 543 aa12.09□□□□□ -0.47
VAMP1-201ENST00000361716 SERPINA11Q86U17 422 aa12.09□□□□□ -0.47
VAMP1-201ENST00000361716 HJURPQ8NCD3 748 aaPredicted RBP12.09□□□□□ -0.47
VAMP1-201ENST00000361716 NEIL3Q8TAT5 605 aa12.09□□□□□ -0.47
VAMP1-201ENST00000361716 RAET1EQ8TD07 263 aa12.09□□□□□ -0.47
VAMP1-201ENST00000361716 BTN2A2Q8WVV5 523 aa12.09□□□□□ -0.47
VAMP1-201ENST00000361716 NXPE2Q96DL1 559 aa12.09□□□□□ -0.47
VAMP1-201ENST00000361716 CDCA4Q9BXL8 241 aa12.09□□□□□ -0.47
VAMP1-201ENST00000361716 POLR2J3Q9H1A7 115 aaKnown RBP12.09□□□□□ -0.47
VAMP1-201ENST00000361716 METTL17Q9H7H0 456 aaPredicted RBP12.09□□□□□ -0.47
VAMP1-201ENST00000361716 PADI2Q9Y2J8 665 aa12.09□□□□□ -0.47
VAMP1-201ENST00000361716 IQCMA0A1B0GVH7 501 aa12.08□□□□□ -0.48
VAMP1-201ENST00000361716 TRBC2A0A5B9 178 aa12.08□□□□□ -0.48
VAMP1-201ENST00000361716 SLC43A1O75387 559 aa12.08□□□□□ -0.48
VAMP1-201ENST00000361716 ETV5P41161 510 aa12.08□□□□□ -0.48
VAMP1-201ENST00000361716 GRIN2CQ14957 1233 aa12.08□□□□□ -0.48
VAMP1-201ENST00000361716 SYTL3Q4VX76 610 aa12.08□□□□□ -0.48
VAMP1-201ENST00000361716 CLEC12AQ5QGZ9 265 aa12.08□□□□□ -0.48
VAMP1-201ENST00000361716 GPR155Q7Z3F1 870 aa12.08□□□□□ -0.48
VAMP1-201ENST00000361716 C1orf52Q8N6N3 182 aaKnown RBP12.08□□□□□ -0.48
VAMP1-201ENST00000361716 SAMD12Q8N8I0 201 aa12.08□□□□□ -0.48
VAMP1-201ENST00000361716 TBX5Q99593 518 aa12.08□□□□□ -0.48
VAMP1-201ENST00000361716 RAD9AQ99638 391 aa12.08□□□□□ -0.48
VAMP1-201ENST00000361716 USB1Q9BQ65 265 aaKnown RBP12.08□□□□□ -0.48
VAMP1-201ENST00000361716 ZNF416Q9BWM5 594 aa12.08□□□□□ -0.48
VAMP1-201ENST00000361716 STARD7Q9NQZ5 370 aa12.08□□□□□ -0.48
VAMP1-201ENST00000361716 ZFR2Q9UPR6 939 aaKnown RBP12.08□□□□□ -0.48
VAMP1-201ENST00000361716 TRBV5-3A0A0A0MS03 114 aa12.08□□□□□ -0.48
VAMP1-201ENST00000361716 A0A0U1RQF3 1178 aa12.08□□□□□ -0.48
VAMP1-201ENST00000361716 C2orf78A6NCI8 922 aa12.08□□□□□ -0.48
VAMP1-201ENST00000361716 C5orf58C9J3I9 102 aa12.08□□□□□ -0.48
VAMP1-201ENST00000361716 HCN1O60741 890 aa12.08□□□□□ -0.48
VAMP1-201ENST00000361716 SIX6O95475 246 aa12.08□□□□□ -0.48
VAMP1-201ENST00000361716 MPC2O95563 127 aa12.08□□□□□ -0.48
VAMP1-201ENST00000361716 CKMP06732 381 aa12.08□□□□□ -0.48
VAMP1-201ENST00000361716 MAPK1P28482 360 aa12.08□□□□□ -0.48
VAMP1-201ENST00000361716 SOX18P35713 384 aa12.08□□□□□ -0.48
VAMP1-201ENST00000361716 FLT3LGP49771 235 aa12.08□□□□□ -0.48
VAMP1-201ENST00000361716 HNMTP50135 292 aa12.08□□□□□ -0.48
VAMP1-201ENST00000361716 GDI2P50395 445 aaKnown RBP12.08□□□□□ -0.48
VAMP1-201ENST00000361716 PPP3R1P63098 170 aa12.08□□□□□ -0.48
VAMP1-201ENST00000361716 ZNF33BQ06732 778 aa12.08□□□□□ -0.48
VAMP1-201ENST00000361716 ADAM15Q13444 863 aa12.08□□□□□ -0.48
VAMP1-201ENST00000361716 GRB14Q14449 540 aa12.08□□□□□ -0.48
VAMP1-201ENST00000361716 SF3A2Q15428 464 aaKnown RBP12.08□□□□□ -0.48
VAMP1-201ENST00000361716 GPR150Q8NGU9 434 aa12.08□□□□□ -0.48
VAMP1-201ENST00000361716 LRR1Q96L50 414 aa12.08□□□□□ -0.48
VAMP1-201ENST00000361716 CXorf58Q96LI9 332 aa12.08□□□□□ -0.48
VAMP1-201ENST00000361716 SEC22CQ9BRL7 303 aa12.08□□□□□ -0.48
VAMP1-201ENST00000361716 SLC29A3Q9BZD2 475 aa12.08□□□□□ -0.48
VAMP1-201ENST00000361716 GSX2Q9BZM3 304 aa12.08□□□□□ -0.48
VAMP1-201ENST00000361716 MAGEH1Q9H213 219 aa12.08□□□□□ -0.48
VAMP1-201ENST00000361716 ZDHHC6Q9H6R6 413 aa12.08□□□□□ -0.48
VAMP1-201ENST00000361716 FOLH1BQ9HBA9 442 aa12.08□□□□□ -0.48
VAMP1-201ENST00000361716 MLXQ9UH92 298 aa12.08□□□□□ -0.48
VAMP1-201ENST00000361716 FBXL2Q9UKC9 423 aa12.08□□□□□ -0.48
VAMP1-201ENST00000361716 RPL36Q9Y3U8 105 aaKnown RBP12.08□□□□□ -0.48
VAMP1-201ENST00000361716 C5orf42Q9H799 3197 aa12.08□□□□□ -0.48
VAMP1-201ENST00000361716 EPOP01588 193 aa12.08□□□□□ -0.48
VAMP1-201ENST00000361716 TPOP07202 933 aa12.08□□□□□ -0.48
VAMP1-201ENST00000361716 ASGR1P07306 291 aa12.08□□□□□ -0.48
VAMP1-201ENST00000361716 PRPS2P11908 318 aa12.08□□□□□ -0.48
VAMP1-201ENST00000361716 HOXC13P31276 330 aa12.08□□□□□ -0.48
VAMP1-201ENST00000361716 PTGER1P34995 402 aa12.08□□□□□ -0.48
VAMP1-201ENST00000361716 FNTBP49356 437 aa12.08□□□□□ -0.48
VAMP1-201ENST00000361716 SCARB2Q14108 478 aa12.08□□□□□ -0.48
VAMP1-201ENST00000361716 PCBP2Q15366 365 aaKnown RBP eCLIP12.08□□□□□ -0.487e-8■□□□□ 9.2
VAMP1-201ENST00000361716 LGALSLQ3ZCW2 172 aaPredicted RBP12.08□□□□□ -0.48
VAMP1-201ENST00000361716 CDKL4Q5MAI5 379 aa12.08□□□□□ -0.48
VAMP1-201ENST00000361716 SERPINA13PQ6UXR4 307 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms