RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 OR10A5Q9H207 317 aa6.96□□□□□ -1.29
CLCN3-202ENST00000360642 SGK2Q9HBY8 427 aa6.96□□□□□ -1.29
CLCN3-202ENST00000360642 SIRT5Q9NXA8 310 aa6.96□□□□□ -1.29
CLCN3-202ENST00000360642 IL36AQ9UHA7 158 aa6.96□□□□□ -1.29
CLCN3-202ENST00000360642 ATP11BQ9Y2G3 1177 aa6.96□□□□□ -1.29
CLCN3-202ENST00000360642 IRAK3Q9Y616 596 aa6.96□□□□□ -1.29
CLCN3-202ENST00000360642 ZNF99A8MXY4 864 aaPredicted RBP6.96□□□□□ -1.3
CLCN3-202ENST00000360642 PTGES3LE9PB15 166 aa6.96□□□□□ -1.3
CLCN3-202ENST00000360642 hCG_2039718K7EN88 272 aa6.96□□□□□ -1.3
CLCN3-202ENST00000360642 ATG13O75143 517 aa6.96□□□□□ -1.3
CLCN3-202ENST00000360642 GCM2O75603 506 aaPredicted RBP6.96□□□□□ -1.3
CLCN3-202ENST00000360642 CLPXO76031 633 aa6.96□□□□□ -1.3
CLCN3-202ENST00000360642 DIRAS1O95057 198 aa6.96□□□□□ -1.3
CLCN3-202ENST00000360642 CPSF4O95639 269 aaKnown RBP6.96□□□□□ -1.3
CLCN3-202ENST00000360642 ANGPTL1O95841 491 aa6.96□□□□□ -1.3
CLCN3-202ENST00000360642 POLR2EP19388 210 aaKnown RBP6.96□□□□□ -1.3
CLCN3-202ENST00000360642 MMP12P39900 470 aa6.96□□□□□ -1.3
CLCN3-202ENST00000360642 BDKRB1P46663 353 aa6.96□□□□□ -1.3
CLCN3-202ENST00000360642 IL5RAQ01344 420 aa6.96□□□□□ -1.3
CLCN3-202ENST00000360642 SPCS2Q15005 226 aa6.96□□□□□ -1.3
CLCN3-202ENST00000360642 ACOX1Q15067 660 aa6.96□□□□□ -1.3
CLCN3-202ENST00000360642 SPIN4Q56A73 249 aa6.96□□□□□ -1.3
CLCN3-202ENST00000360642 CPTPQ5TA50 214 aa6.96□□□□□ -1.3
CLCN3-202ENST00000360642 DUS1LQ6P1R4 473 aaKnown RBP6.96□□□□□ -1.3
CLCN3-202ENST00000360642 GALNT18Q6P9A2 607 aa6.96□□□□□ -1.3
CLCN3-202ENST00000360642 C1orf52Q8N6N3 182 aaKnown RBP6.96□□□□□ -1.3
CLCN3-202ENST00000360642 FBXO15Q8NCQ5 510 aaPredicted RBP6.96□□□□□ -1.3
CLCN3-202ENST00000360642 HUS1BQ8NHY5 278 aa6.96□□□□□ -1.3
CLCN3-202ENST00000360642 PPP1R14BQ96C90 147 aa6.96□□□□□ -1.3
CLCN3-202ENST00000360642 ERLEC1Q96DZ1 483 aa6.96□□□□□ -1.3
CLCN3-202ENST00000360642 WDR34Q96EX3 536 aa6.96□□□□□ -1.3
CLCN3-202ENST00000360642 MED8Q96G25 268 aa6.96□□□□□ -1.3
CLCN3-202ENST00000360642 LRIG1Q96JA1 1093 aa6.96□□□□□ -1.3
CLCN3-202ENST00000360642 NELL2Q99435 816 aa6.96□□□□□ -1.3
CLCN3-202ENST00000360642 EPHX3Q9H6B9 360 aa6.96□□□□□ -1.3
CLCN3-202ENST00000360642 PALMDQ9NP74 551 aa6.96□□□□□ -1.3
CLCN3-202ENST00000360642 FAIMQ9NVQ4 179 aa6.96□□□□□ -1.3
CLCN3-202ENST00000360642 TBCCD1Q9NVR7 557 aa6.96□□□□□ -1.3
CLCN3-202ENST00000360642 PDP1Q9P0J1 537 aaPredicted RBP6.96□□□□□ -1.3
CLCN3-202ENST00000360642 TBC1D14Q9P2M4 693 aa6.96□□□□□ -1.3
CLCN3-202ENST00000360642 FZD4Q9ULV1 537 aa6.96□□□□□ -1.3
CLCN3-202ENST00000360642 SNX5Q9Y5X3 404 aa6.96□□□□□ -1.3
CLCN3-202ENST00000360642 F2RL2O00254 374 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 PFDN1O60925 122 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 MYO1DO94832 1006 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 FGF19O95750 216 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 CATP04040 527 aaKnown RBP6.95□□□□□ -1.3
CLCN3-202ENST00000360642 LORP23490 312 aaPredicted RBP6.95□□□□□ -1.3
CLCN3-202ENST00000360642 PDHA2P29803 388 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 RANBP1P43487 201 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 TMED1Q13445 227 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 DDX39BQ13838 428 aaKnown RBP6.95□□□□□ -1.3
CLCN3-202ENST00000360642 RGNQ15493 299 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 ZNF284Q2VY69 593 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 TSEN54Q7Z6J9 526 aaKnown RBP6.95□□□□□ -1.3
CLCN3-202ENST00000360642 CCDC71Q8IV32 467 aaPredicted RBP6.95□□□□□ -1.3
CLCN3-202ENST00000360642 NRSN1Q8IZ57 195 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 SMYD1Q8NB12 490 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 GOT1L1Q8NHS2 421 aaPredicted RBP6.95□□□□□ -1.3
CLCN3-202ENST00000360642 TRUB1Q8WWH5 349 aaKnown RBP6.95□□□□□ -1.3
CLCN3-202ENST00000360642 NEIL2Q969S2 332 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 TMEM41AQ96HV5 264 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 PLEKHA8Q96JA3 519 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 EPYCQ99645 322 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 BCL7BQ9BQE9 202 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 DGCR6LQ9BY27 220 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 RIBC2Q9H4K1 309 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 PADI2Q9Y2J8 665 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 HIDE1A8MVS5 230 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 MYO1GB0I1T2 1018 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 RNASET2O00584 256 aaKnown RBP6.95□□□□□ -1.3
CLCN3-202ENST00000360642 C1orf105O95561 183 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 SOD1P00441 154 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 TIMP1P01033 207 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 ANXA4P09525 319 aaPredicted RBP6.95□□□□□ -1.3
CLCN3-202ENST00000360642 PTPN2P17706 415 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 PPIBP23284 216 aaKnown RBP6.95□□□□□ -1.3
CLCN3-202ENST00000360642 EPHA2P29317 976 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 TIA1P31483 386 aaKnown RBP eCLIP6.95□□□□□ -1.33e-6■■■□□ 17.1
CLCN3-202ENST00000360642 MVDP53602 400 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 RRADP55042 308 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 C21orf59P57076 290 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 GAB1Q13480 694 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 MAD2L1BPQ15013 274 aaPredicted RBP6.95□□□□□ -1.3
CLCN3-202ENST00000360642 HKDC1Q2TB90 917 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 SYTL3Q4VX76 610 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 SYT6Q5T7P8 510 aaPredicted RBP6.95□□□□□ -1.3
CLCN3-202ENST00000360642 ANXA8L1Q5VT79 327 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 TMEM220Q6QAJ8 160 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 TTC29Q8NA56 475 aaPredicted RBP6.95□□□□□ -1.3
CLCN3-202ENST00000360642 NAXEQ8NCW5 288 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 SIMC1Q8NDZ2 872 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 CXorf40BQ96DE9 158 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 SIGLEC11Q96RL6 698 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 PITX2Q99697 317 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 TTYH1Q9H313 450 aaPredicted RBP6.95□□□□□ -1.3
CLCN3-202ENST00000360642 RAD21L1Q9H4I0 556 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 ERVK-18Q9QC07 812 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 ATP6V1HQ9UI12 483 aa6.95□□□□□ -1.3
CLCN3-202ENST00000360642 SAMHD1Q9Y3Z3 626 aaKnown RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms