RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 TMEM184CQ9NVA4 438 aa13.14□□□□□ -0.31
CSNK1E-201ENST00000359867 QPCTLQ9NXS2 382 aa13.14□□□□□ -0.31
CSNK1E-201ENST00000359867 PSME2Q9UL46 239 aa13.14□□□□□ -0.31
CSNK1E-201ENST00000359867 ICKQ9UPZ9 632 aa13.14□□□□□ -0.31
CSNK1E-201ENST00000359867 U3KQV3 271 aa13.14□□□□□ -0.31
CSNK1E-201ENST00000359867 TRIM64BA6NI03 449 aa13.13□□□□□ -0.31
CSNK1E-201ENST00000359867 GNGT2O14610 69 aa13.13□□□□□ -0.31
CSNK1E-201ENST00000359867 CAPN5O15484 640 aaPredicted RBP13.13□□□□□ -0.31
CSNK1E-201ENST00000359867 CST1P01037 141 aa13.13□□□□□ -0.31
CSNK1E-201ENST00000359867 IDUAP35475 653 aa13.13□□□□□ -0.31
CSNK1E-201ENST00000359867 BSGP35613 385 aa13.13□□□□□ -0.31
CSNK1E-201ENST00000359867 MPLP40238 635 aa13.13□□□□□ -0.31
CSNK1E-201ENST00000359867 NKX2-5P52952 324 aaPredicted RBP13.13□□□□□ -0.31
CSNK1E-201ENST00000359867 RAD23AP54725 363 aa13.13□□□□□ -0.31
CSNK1E-201ENST00000359867 LSM3P62310 102 aaKnown RBP13.13□□□□□ -0.31
CSNK1E-201ENST00000359867 HLA-BQ31612 363 aa13.13□□□□□ -0.31
CSNK1E-201ENST00000359867 PTOV1Q86YD1 416 aa13.13□□□□□ -0.31
CSNK1E-201ENST00000359867 GATAD2AQ86YP4 633 aa13.13□□□□□ -0.31
CSNK1E-201ENST00000359867 SLC37A2Q8TED4 501 aa13.13□□□□□ -0.31
CSNK1E-201ENST00000359867 RGMAQ96B86 450 aa13.13□□□□□ -0.31
CSNK1E-201ENST00000359867 MBOAT4Q96T53 435 aa13.13□□□□□ -0.31
CSNK1E-201ENST00000359867 TUBA1CQ9BQE3 449 aa13.13□□□□□ -0.31
CSNK1E-201ENST00000359867 ZNF717Q9BY31 904 aaPredicted RBP13.13□□□□□ -0.31
CSNK1E-201ENST00000359867 CHST8Q9H2A9 424 aa13.13□□□□□ -0.31
CSNK1E-201ENST00000359867 CAPN10Q9HC96 672 aa13.13□□□□□ -0.31
CSNK1E-201ENST00000359867 FAM118AQ9NWS6 357 aa13.13□□□□□ -0.31
CSNK1E-201ENST00000359867 TMEM9Q9P0T7 183 aa13.13□□□□□ -0.31
CSNK1E-201ENST00000359867 RPS6KA6Q9UK32 745 aa13.13□□□□□ -0.31
CSNK1E-201ENST00000359867 ERGIC3Q9Y282 383 aa13.13□□□□□ -0.31
CSNK1E-201ENST00000359867 G3V2T6 193 aa13.13□□□□□ -0.31
CSNK1E-201ENST00000359867 OR1F1O43749 312 aa13.13□□□□□ -0.31
CSNK1E-201ENST00000359867 INMTO95050 263 aa13.13□□□□□ -0.31
CSNK1E-201ENST00000359867 IL3P08700 152 aa13.13□□□□□ -0.31
CSNK1E-201ENST00000359867 MC1RQ01726 317 aa13.13□□□□□ -0.31
CSNK1E-201ENST00000359867 RGNQ15493 299 aa13.13□□□□□ -0.31
CSNK1E-201ENST00000359867 NDUFA5Q16718 116 aa13.13□□□□□ -0.31
CSNK1E-201ENST00000359867 ZNF761Q86XN6 746 aaPredicted RBP13.13□□□□□ -0.31
CSNK1E-201ENST00000359867 ZDHHC1Q8WTX9 485 aa13.13□□□□□ -0.31
CSNK1E-201ENST00000359867 F2RL3Q96RI0 385 aa13.13□□□□□ -0.31
CSNK1E-201ENST00000359867 MRPS30Q9NP92 439 aaKnown RBP13.13□□□□□ -0.31
CSNK1E-201ENST00000359867 FEZF1A0PJY2 475 aa13.12□□□□□ -0.31
CSNK1E-201ENST00000359867 HS6ST1O60243 411 aa13.12□□□□□ -0.31
CSNK1E-201ENST00000359867 KDELR2P33947 212 aa13.12□□□□□ -0.31
CSNK1E-201ENST00000359867 GRK3P35626 688 aa13.12□□□□□ -0.31
CSNK1E-201ENST00000359867 ARRB1P49407 418 aaPredicted RBP13.12□□□□□ -0.31
CSNK1E-201ENST00000359867 TRA2BP62995 288 aaKnown RBP13.12□□□□□ -0.31
CSNK1E-201ENST00000359867 CD47Q08722 323 aa13.12□□□□□ -0.31
CSNK1E-201ENST00000359867 TCF15Q12870 199 aa13.12□□□□□ -0.31
CSNK1E-201ENST00000359867 SELENBP1Q13228 472 aa13.12□□□□□ -0.31
CSNK1E-201ENST00000359867 KCNAB2Q13303 367 aa13.12□□□□□ -0.31
CSNK1E-201ENST00000359867 ZC3H14Q6PJT7 736 aaKnown RBP13.12□□□□□ -0.31
CSNK1E-201ENST00000359867 TMEM179BQ7Z7N9 219 aa13.12□□□□□ -0.31
CSNK1E-201ENST00000359867 ZDHHC13Q8IUH4 622 aa13.12□□□□□ -0.31
CSNK1E-201ENST00000359867 GRAMD2AQ8IUY3 354 aa13.12□□□□□ -0.31
CSNK1E-201ENST00000359867 SLC25A45Q8N413 288 aa13.12□□□□□ -0.31
CSNK1E-201ENST00000359867 SVOPLQ8N434 492 aa13.12□□□□□ -0.31
CSNK1E-201ENST00000359867 TBC1D19Q8N5T2 526 aa13.12□□□□□ -0.31
CSNK1E-201ENST00000359867 CHDHQ8NE62 594 aaPredicted RBP13.12□□□□□ -0.31
CSNK1E-201ENST00000359867 PRSS33Q8NF86 280 aa13.12□□□□□ -0.31
CSNK1E-201ENST00000359867 LILRB4Q8NHJ6 448 aa13.12□□□□□ -0.31
CSNK1E-201ENST00000359867 RAB2BQ8WUD1 216 aa13.12□□□□□ -0.31
CSNK1E-201ENST00000359867 ZNF764Q96H86 408 aaPredicted RBP13.12□□□□□ -0.31
CSNK1E-201ENST00000359867 SARGQ9BW04 601 aa13.12□□□□□ -0.31
CSNK1E-201ENST00000359867 YTHDF1Q9BYJ9 559 aaKnown RBP13.12□□□□□ -0.31
CSNK1E-201ENST00000359867 GAREM1Q9H706 876 aa13.12□□□□□ -0.31
CSNK1E-201ENST00000359867 ERVMER34-1Q9H9K5 563 aa13.12□□□□□ -0.31
CSNK1E-201ENST00000359867 DAPK2Q9UIK4 370 aa13.12□□□□□ -0.31
CSNK1E-201ENST00000359867 GMEB2Q9UKD1 530 aa13.12□□□□□ -0.31
CSNK1E-201ENST00000359867 MUC6Q6W4X9 2439 aa13.12□□□□□ -0.31
CSNK1E-201ENST00000359867 ARID1BQ8NFD5 2236 aaPredicted RBP13.12□□□□□ -0.31
CSNK1E-201ENST00000359867 IGKV1-8A0A0C4DH67 115 aa13.12□□□□□ -0.31
CSNK1E-201ENST00000359867 BCAS1O75363 584 aaPredicted RBP13.12□□□□□ -0.31
CSNK1E-201ENST00000359867 KRT75O95678 551 aa13.12□□□□□ -0.31
CSNK1E-201ENST00000359867 DDCP20711 480 aa13.12□□□□□ -0.31
CSNK1E-201ENST00000359867 PRKACBP22694 351 aa13.12□□□□□ -0.31
CSNK1E-201ENST00000359867 ARFIP1P53367 373 aa13.12□□□□□ -0.31
CSNK1E-201ENST00000359867 MAPK12P53778 367 aa13.12□□□□□ -0.31
CSNK1E-201ENST00000359867 MAZP56270 477 aaKnown RBP13.12□□□□□ -0.31
CSNK1E-201ENST00000359867 HBA1P69905 142 aa13.12□□□□□ -0.31
CSNK1E-201ENST00000359867 CYP4F2P78329 520 aa13.12□□□□□ -0.31
CSNK1E-201ENST00000359867 LAPTM4AQ15012 233 aa13.12□□□□□ -0.31
CSNK1E-201ENST00000359867 TRIM16LQ309B1 348 aa13.12□□□□□ -0.31
CSNK1E-201ENST00000359867 TMEM35AQ53FP2 167 aa13.12□□□□□ -0.31
CSNK1E-201ENST00000359867 GTF2IRD2BQ6EKJ0 949 aa13.12□□□□□ -0.31
CSNK1E-201ENST00000359867 GTF2IRD2Q86UP8 949 aa13.12□□□□□ -0.31
CSNK1E-201ENST00000359867 NUDT13Q86X67 352 aa13.12□□□□□ -0.31
CSNK1E-201ENST00000359867 GKN2Q86XP6 184 aa13.12□□□□□ -0.31
CSNK1E-201ENST00000359867 TRIM48Q8IWZ4 208 aa13.12□□□□□ -0.31
CSNK1E-201ENST00000359867 ZCCHC7Q8N3Z6 543 aaKnown RBP13.12□□□□□ -0.31
CSNK1E-201ENST00000359867 SPERTQ8NA61 448 aa13.12□□□□□ -0.31
CSNK1E-201ENST00000359867 PNPT1Q8TCS8 783 aaKnown RBP13.12□□□□□ -0.31
CSNK1E-201ENST00000359867 CAPSLQ8WWF8 208 aa13.12□□□□□ -0.31
CSNK1E-201ENST00000359867 TRUB1Q8WWH5 349 aaKnown RBP13.12□□□□□ -0.31
CSNK1E-201ENST00000359867 SDCCAG3Q96C92 435 aa13.12□□□□□ -0.31
CSNK1E-201ENST00000359867 TM4SF18Q96CE8 201 aa13.12□□□□□ -0.31
CSNK1E-201ENST00000359867 NRBF2Q96F24 287 aa13.12□□□□□ -0.31
CSNK1E-201ENST00000359867 MIEF1Q9NQG6 463 aa13.12□□□□□ -0.31
CSNK1E-201ENST00000359867 TAS2R9Q9NYW1 312 aa13.12□□□□□ -0.31
CSNK1E-201ENST00000359867 OR6C2Q9NZP2 312 aa13.12□□□□□ -0.31
CSNK1E-201ENST00000359867 RAB23Q9ULC3 237 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms