RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 PIM1P11309 404 aaPredicted RBP15.37■□□□□ 0.05
COL18A1-203ENST00000359759 FGF3P11487 239 aaPredicted RBP15.37■□□□□ 0.05
COL18A1-203ENST00000359759 HOXD8P13378 290 aaPredicted RBP15.37■□□□□ 0.05
COL18A1-203ENST00000359759 ERVK-25P63136 954 aa15.37■□□□□ 0.05
COL18A1-203ENST00000359759 ZNF529Q6P280 563 aa15.37■□□□□ 0.05
COL18A1-203ENST00000359759 ZNF572Q7Z3I7 529 aaPredicted RBP15.37■□□□□ 0.05
COL18A1-203ENST00000359759 ABCG5Q9H222 651 aa15.37■□□□□ 0.05
COL18A1-203ENST00000359759 A0A0D9SEW6 157 aa15.37■□□□□ 0.05
COL18A1-203ENST00000359759 FAAHO00519 579 aa15.37■□□□□ 0.05
COL18A1-203ENST00000359759 CSTAP01040 98 aa15.37■□□□□ 0.05
COL18A1-203ENST00000359759 APOFQ13790 326 aa15.37■□□□□ 0.05
COL18A1-203ENST00000359759 OR14K1Q8NGZ2 314 aa15.37■□□□□ 0.05
COL18A1-203ENST00000359759 LGALS12Q96DT0 336 aa15.37■□□□□ 0.05
COL18A1-203ENST00000359759 FAM46AQ96IP4 442 aaKnown RBP15.37■□□□□ 0.05
COL18A1-203ENST00000359759 DOHHQ9BU89 302 aa15.37■□□□□ 0.05
COL18A1-203ENST00000359759 KCNK12Q9HB15 430 aa15.37■□□□□ 0.05
COL18A1-203ENST00000359759 NLE1Q9NVX2 485 aaPredicted RBP15.37■□□□□ 0.05
COL18A1-203ENST00000359759 GNG13Q9P2W3 67 aa15.37■□□□□ 0.05
COL18A1-203ENST00000359759 NLKQ9UBE8 527 aa15.37■□□□□ 0.05
COL18A1-203ENST00000359759 ZNF175Q9Y473 711 aa15.37■□□□□ 0.05
COL18A1-203ENST00000359759 RNF215Q9Y6U7 377 aa15.37■□□□□ 0.05
COL18A1-203ENST00000359759 AGPAT2O15120 278 aa15.37■□□□□ 0.05
COL18A1-203ENST00000359759 STC1P52823 247 aa15.37■□□□□ 0.05
COL18A1-203ENST00000359759 SCGB2A2Q13296 93 aa15.37■□□□□ 0.05
COL18A1-203ENST00000359759 LILRB2Q8N423 598 aa15.37■□□□□ 0.05
COL18A1-203ENST00000359759 ITFG2Q969R8 447 aa15.37■□□□□ 0.05
COL18A1-203ENST00000359759 ST6GALNAC4Q9H4F1 302 aa15.37■□□□□ 0.05
COL18A1-203ENST00000359759 FXYD4P59646 89 aa15.36■□□□□ 0.05
COL18A1-203ENST00000359759 TEAD2Q15562 447 aa15.36■□□□□ 0.05
COL18A1-203ENST00000359759 AWAT2Q6E213 333 aa15.36■□□□□ 0.05
COL18A1-203ENST00000359759 NRROSQ86YC3 692 aa15.36■□□□□ 0.05
COL18A1-203ENST00000359759 TEX19Q8NA77 164 aa15.36■□□□□ 0.05
COL18A1-203ENST00000359759 OR52E2Q8NGJ4 325 aa15.36■□□□□ 0.05
COL18A1-203ENST00000359759 BBS10Q8TAM1 723 aa15.36■□□□□ 0.05
COL18A1-203ENST00000359759 TSGA13Q96PP4 275 aa15.36■□□□□ 0.05
COL18A1-203ENST00000359759 GPR52Q9Y2T5 361 aa15.36■□□□□ 0.05
COL18A1-203ENST00000359759 NPPAP01160 153 aa15.36■□□□□ 0.05
COL18A1-203ENST00000359759 ADORA3P0DMS8 318 aa15.36■□□□□ 0.05
COL18A1-203ENST00000359759 ADRB3P13945 408 aa15.36■□□□□ 0.05
COL18A1-203ENST00000359759 CRYZQ08257 329 aaKnown RBP15.36■□□□□ 0.05
COL18A1-203ENST00000359759 CES4AQ5XG92 561 aa15.36■□□□□ 0.05
COL18A1-203ENST00000359759 C15orf52Q6ZUT6 534 aaKnown RBP15.36■□□□□ 0.05
COL18A1-203ENST00000359759 GKN2Q86XP6 184 aa15.36■□□□□ 0.05
COL18A1-203ENST00000359759 OR56B2PQ8NGI1 322 aa15.36■□□□□ 0.05
COL18A1-203ENST00000359759 RPS10P5Q9NQ39 176 aa15.36■□□□□ 0.05
COL18A1-203ENST00000359759 GRXCR2A6NFK2 248 aa15.36■□□□□ 0.05
COL18A1-203ENST00000359759 PFKLP17858 780 aa15.36■□□□□ 0.05
COL18A1-203ENST00000359759 SLAMF1Q13291 335 aa15.36■□□□□ 0.05
COL18A1-203ENST00000359759 MS4A13Q5J8X5 152 aa15.36■□□□□ 0.05
COL18A1-203ENST00000359759 TRAPPC6BQ86SZ2 158 aa15.36■□□□□ 0.05
COL18A1-203ENST00000359759 FTMTQ8N4E7 242 aa15.36■□□□□ 0.05
COL18A1-203ENST00000359759 FAM118AQ9NWS6 357 aa15.36■□□□□ 0.05
COL18A1-203ENST00000359759 SERTAD3Q9UJW9 196 aa15.36■□□□□ 0.05
COL18A1-203ENST00000359759 H0YAE9 185 aa15.36■□□□□ 0.05
COL18A1-203ENST00000359759 UBFD1O14562 309 aaKnown RBP15.36■□□□□ 0.05
COL18A1-203ENST00000359759 AMY2AP04746 511 aa15.36■□□□□ 0.05
COL18A1-203ENST00000359759 NCS1P62166 190 aa15.36■□□□□ 0.05
COL18A1-203ENST00000359759 CMASQ8NFW8 434 aaPredicted RBP15.36■□□□□ 0.05
COL18A1-203ENST00000359759 SYT17Q9BSW7 474 aa15.36■□□□□ 0.05
COL18A1-203ENST00000359759 CLDND1Q9NY35 253 aa15.36■□□□□ 0.05
COL18A1-203ENST00000359759 CNTN5O94779 1100 aa15.36■□□□□ 0.05
COL18A1-203ENST00000359759 TYRP14679 529 aa15.36■□□□□ 0.05
COL18A1-203ENST00000359759 CD9P21926 228 aa15.36■□□□□ 0.05
COL18A1-203ENST00000359759 NKPD1Q17RQ9 610 aa15.36■□□□□ 0.05
COL18A1-203ENST00000359759 TMEM205Q6UW68 189 aa15.36■□□□□ 0.05
COL18A1-203ENST00000359759 DPY19L3Q6ZPD9 716 aa15.36■□□□□ 0.05
COL18A1-203ENST00000359759 C3orf58Q8NDZ4 430 aa15.36■□□□□ 0.05
COL18A1-203ENST00000359759 DCUN1D4Q92564 292 aa15.36■□□□□ 0.05
COL18A1-203ENST00000359759 SGCZQ96LD1 299 aa15.36■□□□□ 0.05
COL18A1-203ENST00000359759 ATRNO75882 1429 aa15.36■□□□□ 0.05
COL18A1-203ENST00000359759 LCHNA4D1U4 455 aa15.35■□□□□ 0.05
COL18A1-203ENST00000359759 RFPL2O75678 378 aa15.35■□□□□ 0.05
COL18A1-203ENST00000359759 MLC1Q15049 377 aa15.35■□□□□ 0.05
COL18A1-203ENST00000359759 GTPBP8Q8N3Z3 284 aaPredicted RBP15.35■□□□□ 0.05
COL18A1-203ENST00000359759 NDNFQ8TB73 568 aa15.35■□□□□ 0.05
COL18A1-203ENST00000359759 CNTNAP3BQ96NU0 1288 aa15.35■□□□□ 0.05
COL18A1-203ENST00000359759 DNTTIP1Q9H147 329 aa15.35■□□□□ 0.05
COL18A1-203ENST00000359759 RNF39Q9H2S5 420 aa15.35■□□□□ 0.05
COL18A1-203ENST00000359759 PRDM9Q9NQV7 894 aa15.35■□□□□ 0.05
COL18A1-203ENST00000359759 DMAC2Q9NW81 257 aa15.35■□□□□ 0.05
COL18A1-203ENST00000359759 ARHGAP23Q9P227 1491 aa15.35■□□□□ 0.05
COL18A1-203ENST00000359759 CRTC1Q6UUV9 634 aa15.35■□□□□ 0.05
COL18A1-203ENST00000359759 IGFN1Q86VF2 1251 aa15.35■□□□□ 0.05
COL18A1-203ENST00000359759 OR7G2Q8NG99 324 aa15.35■□□□□ 0.05
COL18A1-203ENST00000359759 MAPK15Q8TD08 544 aa15.35■□□□□ 0.05
COL18A1-203ENST00000359759 FAM46BQ96A09 425 aa15.35■□□□□ 0.05
COL18A1-203ENST00000359759 FCRL3Q96P31 734 aaPredicted RBP15.35■□□□□ 0.05
COL18A1-203ENST00000359759 MMP28Q9H239 520 aa15.35■□□□□ 0.05
COL18A1-203ENST00000359759 TDP1Q9NUW8 608 aa15.35■□□□□ 0.05
COL18A1-203ENST00000359759 ZNF541Q9H0D2 1346 aa15.35■□□□□ 0.05
COL18A1-203ENST00000359759 KNG1P01042 644 aa15.35■□□□□ 0.05
COL18A1-203ENST00000359759 RPS17P08708 135 aaKnown RBP15.35■□□□□ 0.05
COL18A1-203ENST00000359759 HOXA10P31260 410 aaPredicted RBP15.35■□□□□ 0.05
COL18A1-203ENST00000359759 TMEM115Q12893 351 aaPredicted RBP15.35■□□□□ 0.05
COL18A1-203ENST00000359759 RAB11BQ15907 218 aa15.35■□□□□ 0.05
COL18A1-203ENST00000359759 FAM198BQ6UWH4 519 aa15.35■□□□□ 0.05
COL18A1-203ENST00000359759 TPRG1Q6ZUI0 275 aa15.35■□□□□ 0.05
COL18A1-203ENST00000359759 SLC7A5P1Q8MH63 180 aa15.35■□□□□ 0.05
COL18A1-203ENST00000359759 NR4A3Q92570 626 aa15.35■□□□□ 0.05
COL18A1-203ENST00000359759 MR1Q95460 341 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms