RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 M0R129 80 aa13.11□□□□□ -0.31
VCP-201ENST00000358901 EIF3FO00303 357 aaPredicted RBP13.11□□□□□ -0.31
VCP-201ENST00000358901 GSTT2P0CG29 244 aa13.11□□□□□ -0.31
VCP-201ENST00000358901 NAA10P41227 235 aaPredicted RBP13.11□□□□□ -0.31
VCP-201ENST00000358901 MTNR1AP48039 350 aa13.11□□□□□ -0.31
VCP-201ENST00000358901 CEBPGP53567 150 aa13.11□□□□□ -0.31
VCP-201ENST00000358901 FLYWCH1Q4VC44 716 aa13.11□□□□□ -0.31
VCP-201ENST00000358901 CATSPEREQ5SY80 951 aa13.11□□□□□ -0.31
VCP-201ENST00000358901 SHFQ7M4L6 423 aa13.11□□□□□ -0.31
VCP-201ENST00000358901 OR52P1PQ8NH57 321 aa13.11□□□□□ -0.31
VCP-201ENST00000358901 FIBINQ8TAL6 211 aa13.11□□□□□ -0.31
VCP-201ENST00000358901 ECHDC3Q96DC8 303 aa13.11□□□□□ -0.31
VCP-201ENST00000358901 CCDC115Q96NT0 180 aa13.11□□□□□ -0.31
VCP-201ENST00000358901 R3HDMLQ9H3Y0 253 aa13.11□□□□□ -0.31
VCP-201ENST00000358901 HEBP1Q9NRV9 189 aa13.11□□□□□ -0.31
VCP-201ENST00000358901 HEMK1Q9Y5R4 338 aaPredicted RBP13.11□□□□□ -0.31
VCP-201ENST00000358901 LRRN3E7EW58 273 aa13.1□□□□□ -0.31
VCP-201ENST00000358901 EMC8O43402 210 aa13.1□□□□□ -0.31
VCP-201ENST00000358901 TOXO94900 526 aa13.1□□□□□ -0.31
VCP-201ENST00000358901 HTR1AP08908 422 aa13.1□□□□□ -0.31
VCP-201ENST00000358901 GPR4P46093 362 aa13.1□□□□□ -0.31
VCP-201ENST00000358901 SELENOWP63302 87 aa13.1□□□□□ -0.31
VCP-201ENST00000358901 GRM2Q14416 872 aa13.1□□□□□ -0.31
VCP-201ENST00000358901 SLC25A25Q6KCM7 469 aa13.1□□□□□ -0.31
VCP-201ENST00000358901 OR2AJ1Q8NGZ0 328 aa13.1□□□□□ -0.31
VCP-201ENST00000358901 SUN3Q8TAQ9 357 aa13.1□□□□□ -0.31
VCP-201ENST00000358901 SETD7Q8WTS6 366 aaKnown RBP13.1□□□□□ -0.31
VCP-201ENST00000358901 GTF2H4Q92759 462 aa13.1□□□□□ -0.31
VCP-201ENST00000358901 NELL2Q99435 816 aa13.1□□□□□ -0.31
VCP-201ENST00000358901 LRRN3Q9H3W5 708 aa13.1□□□□□ -0.31
VCP-201ENST00000358901 SEC61A2Q9H9S3 476 aa13.1□□□□□ -0.31
VCP-201ENST00000358901 MYH9P35579 1960 aaKnown RBP13.1□□□□□ -0.31
VCP-201ENST00000358901 A0A1W2PP55 124 aa13.1□□□□□ -0.31
VCP-201ENST00000358901 GRXCR2A6NFK2 248 aa13.1□□□□□ -0.31
VCP-201ENST00000358901 OR2B3O76000 313 aa13.1□□□□□ -0.31
VCP-201ENST00000358901 GABRA3P34903 492 aa13.1□□□□□ -0.31
VCP-201ENST00000358901 POLR2IP36954 125 aaKnown RBP13.1□□□□□ -0.31
VCP-201ENST00000358901 PIN1Q13526 163 aaPredicted RBP13.1□□□□□ -0.31
VCP-201ENST00000358901 NNATQ16517 81 aa13.1□□□□□ -0.31
VCP-201ENST00000358901 DECR1Q16698 335 aa13.1□□□□□ -0.31
VCP-201ENST00000358901 PRRT3Q5FWE3 981 aa13.1□□□□□ -0.31
VCP-201ENST00000358901 INO80EQ8NBZ0 244 aaPredicted RBP13.1□□□□□ -0.31
VCP-201ENST00000358901 ZFP90Q8TF47 636 aa13.1□□□□□ -0.31
VCP-201ENST00000358901 NSMAFQ92636 917 aa13.1□□□□□ -0.31
VCP-201ENST00000358901 OR8D2Q9GZM6 311 aa13.1□□□□□ -0.31
VCP-201ENST00000358901 TMEM45AQ9NWC5 275 aa13.1□□□□□ -0.31
VCP-201ENST00000358901 NLKQ9UBE8 527 aa13.1□□□□□ -0.31
VCP-201ENST00000358901 STUB1Q9UNE7 303 aa13.1□□□□□ -0.31
VCP-201ENST00000358901 DRGXA6NNA5 263 aa13.1□□□□□ -0.31
VCP-201ENST00000358901 LATS1O95835 1130 aa13.1□□□□□ -0.31
VCP-201ENST00000358901 ARHGDIBP52566 201 aa13.1□□□□□ -0.31
VCP-201ENST00000358901 POU6F2P78424 691 aaPredicted RBP13.1□□□□□ -0.31
VCP-201ENST00000358901 CHDHQ8NE62 594 aaPredicted RBP13.1□□□□□ -0.31
VCP-201ENST00000358901 ZNF548Q8NEK5 533 aaPredicted RBP13.1□□□□□ -0.31
VCP-201ENST00000358901 MOAP1Q96BY2 351 aa13.1□□□□□ -0.31
VCP-201ENST00000358901 ZNF300Q96RE9 604 aaPredicted RBP13.1□□□□□ -0.31
VCP-201ENST00000358901 EPYCQ99645 322 aa13.1□□□□□ -0.31
VCP-201ENST00000358901 SACM1LQ9NTJ5 587 aa13.1□□□□□ -0.31
VCP-201ENST00000358901 HRASLS2Q9NWW9 162 aa13.1□□□□□ -0.31
VCP-201ENST00000358901 ENPP5Q9UJA9 477 aa13.1□□□□□ -0.31
VCP-201ENST00000358901 DOT1LQ8TEK3 1739 aa13.09□□□□□ -0.31
VCP-201ENST00000358901 VEGFDO43915 354 aa13.09□□□□□ -0.31
VCP-201ENST00000358901 CDC123O75794 336 aaPredicted RBP13.09□□□□□ -0.31
VCP-201ENST00000358901 C6P13671 934 aa13.09□□□□□ -0.31
VCP-201ENST00000358901 CRHBPP24387 322 aa13.09□□□□□ -0.31
VCP-201ENST00000358901 SHMT2P34897 504 aa13.09□□□□□ -0.31
VCP-201ENST00000358901 FPGSQ05932 587 aa13.09□□□□□ -0.31
VCP-201ENST00000358901 VEZF1Q14119 521 aa13.09□□□□□ -0.31
VCP-201ENST00000358901 SEC23BQ15437 767 aa13.09□□□□□ -0.31
VCP-201ENST00000358901 STX12Q86Y82 276 aa13.09□□□□□ -0.31
VCP-201ENST00000358901 OR4N5Q8IXE1 308 aa13.09□□□□□ -0.31
VCP-201ENST00000358901 PHC2Q8IXK0 858 aa13.09□□□□□ -0.31
VCP-201ENST00000358901 C12orf76Q8N812 135 aaPredicted RBP13.09□□□□□ -0.31
VCP-201ENST00000358901 C17orf50Q8WW18 174 aa13.09□□□□□ -0.31
VCP-201ENST00000358901 NMNAT1Q9HAN9 279 aaPredicted RBP13.09□□□□□ -0.31
VCP-201ENST00000358901 F5P12259 2224 aa13.09□□□□□ -0.31
VCP-201ENST00000358901 SH3D21A4FU49 640 aa13.09□□□□□ -0.31
VCP-201ENST00000358901 KRBA1A5PL33 1030 aa13.09□□□□□ -0.31
VCP-201ENST00000358901 PLD2O14939 933 aa13.09□□□□□ -0.31
VCP-201ENST00000358901 OXSR1O95747 527 aaPredicted RBP13.09□□□□□ -0.31
VCP-201ENST00000358901 PRH1P02810 166 aa13.09□□□□□ -0.31
VCP-201ENST00000358901 ZNF20P17024 532 aa13.09□□□□□ -0.31
VCP-201ENST00000358901 MAN2A2P49641 1150 aa13.09□□□□□ -0.31
VCP-201ENST00000358901 EMX1Q04741 257 aaPredicted RBP13.09□□□□□ -0.31
VCP-201ENST00000358901 RASGEF1BQ0VAM2 473 aa13.09□□□□□ -0.31
VCP-201ENST00000358901 ZNF791Q3KP31 576 aaPredicted RBP13.09□□□□□ -0.31
VCP-201ENST00000358901 GRHL2Q6ISB3 625 aa13.09□□□□□ -0.31
VCP-201ENST00000358901 UBE2Q1Q7Z7E8 422 aa13.09□□□□□ -0.31
VCP-201ENST00000358901 NRSN1Q8IZ57 195 aa13.09□□□□□ -0.31
VCP-201ENST00000358901 SLC44A3Q8N4M1 653 aa13.09□□□□□ -0.31
VCP-201ENST00000358901 GATSQ8NAP1 163 aa13.09□□□□□ -0.31
VCP-201ENST00000358901 OR51E2Q9H255 320 aa13.09□□□□□ -0.31
VCP-201ENST00000358901 GORASP2Q9H8Y8 452 aa13.09□□□□□ -0.31
VCP-201ENST00000358901 NUDT15Q9NV35 164 aa13.09□□□□□ -0.31
VCP-201ENST00000358901 ASCC3Q8N3C0 2202 aaKnown RBP13.09□□□□□ -0.31
VCP-201ENST00000358901 AKAP11Q9UKA4 1901 aa13.09□□□□□ -0.31
VCP-201ENST00000358901 KANTRA0A1W2PQU2 76 aa13.09□□□□□ -0.31
VCP-201ENST00000358901 ATXN1LP0C7T5 689 aaKnown RBP13.09□□□□□ -0.31
VCP-201ENST00000358901 CSF2RAP15509 400 aa13.09□□□□□ -0.31
VCP-201ENST00000358901 SYN1P17600 705 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms