RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 SHOXO15266 292 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 HTR6P50406 440 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 ZNF280AP59817 542 aaPredicted RBP7.02□□□□□ -1.29
VPS13A-202ENST00000357409 RSU1Q15404 277 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 TBRG1Q3YBR2 411 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 BEX5Q5H9J7 111 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 TAS1R3Q7RTX0 852 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 PRICKLE2Q7Z3G6 844 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 OR5AS1Q8N127 324 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 SIX2Q9NPC8 291 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 ATXN10Q9UBB4 475 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 CLEC4EQ9ULY5 219 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 OR2W5A6NFC9 320 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 SLC1A7O00341 560 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 RHDQ02161 417 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 BBS1Q8NFJ9 593 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 ACMSDQ8TDX5 336 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 ALOXE3Q9BYJ1 711 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 PFDN2Q9UHV9 154 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 CSNK1G3Q9Y6M4 447 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 M0R3H8 397 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 EGFP01133 1207 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 F13BP05160 661 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 C1GALT1C1LP0DN25 315 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 ZNF43P17038 809 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 HERVK_113P63132 956 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 ERVK-8P63133 956 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 GSTM4Q03013 218 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 SRSF5Q13243 272 aaKnown RBP7.02□□□□□ -1.29
VPS13A-202ENST00000357409 DLG3Q92796 817 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 LRCH3Q96II8 777 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 ERVK-6Q9BXR3 956 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 TM7SF3Q9NS93 570 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 ERVK-19Q9WJR5 959 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 ASB3Q9Y575 518 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 POLR1AO95602 1720 aaPredicted RBP7.02□□□□□ -1.29
VPS13A-202ENST00000357409 SLC10A3P09131 477 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 BPIP17213 487 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 NDUFS1P28331 727 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 OR1D5P58170 312 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 SERINC3Q13530 473 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 METTL2BQ6P1Q9 378 aaKnown RBP7.02□□□□□ -1.29
VPS13A-202ENST00000357409 PDPRQ8NCN5 879 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 STON2Q8WXE9 905 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 TOMM40LQ969M1 308 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 PLPPR2Q96GM1 343 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 KLHL9Q9P2J3 617 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 DIP2BQ9P265 1576 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 CAPN5O15484 640 aaPredicted RBP7.02□□□□□ -1.29
VPS13A-202ENST00000357409 CRHBPP24387 322 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 CERS1P27544 350 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 GNG2P59768 71 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 SLC18A2Q05940 514 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 GRM7Q14831 915 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 BHLHE23Q8NDY6 225 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 C3orf58Q8NDZ4 430 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 ZNF559Q9BR84 538 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 TUBB1Q9H4B7 451 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 ABCD2Q9UBJ2 740 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 C19orf25Q9UFG5 118 aaPredicted RBP7.02□□□□□ -1.29
VPS13A-202ENST00000357409 SNHG28P0DPA3 235 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 HSD17B2P37059 387 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 ARSFP54793 590 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 GINS1Q14691 196 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 ZDHHC24Q6UX98 284 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 OR9A2Q8NGT5 310 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 ZFYVE21Q9BQ24 234 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 DYNLRB1Q9NP97 96 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 LCHNA4D1U4 455 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 SLC7A4O43246 635 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 LILRB3O75022 631 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 ITGA10O75578 1167 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 GATBO75879 557 aaKnown RBP7.02□□□□□ -1.29
VPS13A-202ENST00000357409 FARS2O95363 451 aaKnown RBP7.02□□□□□ -1.29
VPS13A-202ENST00000357409 TPOP07202 933 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 PROS1P07225 676 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 ADRB3P13945 408 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 GTF2F2P13984 249 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 MMP14P50281 582 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 HERV-K104P61576 105 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 NAA20P61599 178 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 CDNFQ49AH0 187 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 IQCCQ4KMZ1 466 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 HES5Q5TA89 166 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 QSOX2Q6ZRP7 698 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 MOB3CQ70IA8 216 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 THAP4Q8WY91 577 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 OSBPL11Q9BXB4 747 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 MS4A12Q9NXJ0 267 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 EPHA6Q9UF33 1036 aa7.02□□□□□ -1.29
VPS13A-202ENST00000357409 CLEC3BP05452 202 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 PRPS2P11908 318 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 DRD5P21918 477 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 LCN1P1Q5VSP4 162 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 ARCQ7LC44 396 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 SIRT6Q8N6T7 355 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 HM13Q8TCT9 377 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 ADOQ96SZ5 270 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 RTP3Q9BQQ7 232 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 MND1Q9BWT6 205 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms