RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 IQCMA0A1B0GVH7 501 aa9.62□□□□□ -0.87
PTPRA-203ENST00000356147 CD8B2A6NJW9 211 aa9.62□□□□□ -0.87
PTPRA-203ENST00000356147 PRRG1O14668 218 aa9.62□□□□□ -0.87
PTPRA-203ENST00000356147 ARHGEF9O43307 516 aa9.62□□□□□ -0.87
PTPRA-203ENST00000356147 ALPPP05187 535 aa9.62□□□□□ -0.87
PTPRA-203ENST00000356147 CD8BP10966 210 aa9.62□□□□□ -0.87
PTPRA-203ENST00000356147 DDX5P17844 614 aaKnown RBP9.62□□□□□ -0.87
PTPRA-203ENST00000356147 INPP1P49441 399 aa9.62□□□□□ -0.87
PTPRA-203ENST00000356147 AP1S2P56377 157 aa9.62□□□□□ -0.87
PTPRA-203ENST00000356147 CNTN1Q12860 1018 aa9.62□□□□□ -0.87
PTPRA-203ENST00000356147 LAMTOR1Q6IAA8 161 aa9.62□□□□□ -0.87
PTPRA-203ENST00000356147 MED27Q6P2C8 311 aa9.62□□□□□ -0.87
PTPRA-203ENST00000356147 PGBD2Q6P3X8 592 aa9.62□□□□□ -0.87
PTPRA-203ENST00000356147 LAPTM4BQ86VI4 370 aa9.62□□□□□ -0.87
PTPRA-203ENST00000356147 TRIM69Q86WT6 500 aa9.62□□□□□ -0.87
PTPRA-203ENST00000356147 TMEM145Q8NBT3 493 aa9.62□□□□□ -0.87
PTPRA-203ENST00000356147 OR8H1Q8NGG4 311 aa9.62□□□□□ -0.87
PTPRA-203ENST00000356147 OR5D16Q8NGK9 328 aa9.62□□□□□ -0.87
PTPRA-203ENST00000356147 ZFAND1Q8TCF1 268 aa9.62□□□□□ -0.87
PTPRA-203ENST00000356147 MRPS31Q92665 395 aaKnown RBP9.62□□□□□ -0.87
PTPRA-203ENST00000356147 TRIM63Q969Q1 353 aa9.62□□□□□ -0.87
PTPRA-203ENST00000356147 KCTD7Q96MP8 289 aa9.62□□□□□ -0.87
PTPRA-203ENST00000356147 CASD1Q96PB1 797 aa9.62□□□□□ -0.87
PTPRA-203ENST00000356147 RIOK2Q9BVS4 552 aaKnown RBP9.62□□□□□ -0.87
PTPRA-203ENST00000356147 SLAMF7Q9NQ25 335 aa9.62□□□□□ -0.87
PTPRA-203ENST00000356147 ANGPT4Q9Y264 503 aa9.62□□□□□ -0.87
PTPRA-203ENST00000356147 H0YIV9 168 aa9.62□□□□□ -0.87
PTPRA-203ENST00000356147 NRG2O14511 850 aaPredicted RBP9.62□□□□□ -0.87
PTPRA-203ENST00000356147 FRS3O43559 492 aa9.62□□□□□ -0.87
PTPRA-203ENST00000356147 GPR37L1O60883 481 aa9.62□□□□□ -0.87
PTPRA-203ENST00000356147 KLHL18O94889 574 aa9.62□□□□□ -0.87
PTPRA-203ENST00000356147 GSTM1P09488 218 aa9.62□□□□□ -0.87
PTPRA-203ENST00000356147 TBPL1P62380 186 aa9.62□□□□□ -0.87
PTPRA-203ENST00000356147 SNAPC1Q16533 368 aa9.62□□□□□ -0.87
PTPRA-203ENST00000356147 SYT14P1Q58G82 188 aa9.62□□□□□ -0.87
PTPRA-203ENST00000356147 DNAJB7Q7Z6W7 309 aaPredicted RBP9.62□□□□□ -0.87
PTPRA-203ENST00000356147 IQCHQ86VS3 1027 aa9.62□□□□□ -0.87
PTPRA-203ENST00000356147 OXR1Q8N573 874 aa9.62□□□□□ -0.87
PTPRA-203ENST00000356147 NATD1Q8N6N6 113 aa9.62□□□□□ -0.87
PTPRA-203ENST00000356147 C2orf69Q8N8R5 385 aa9.62□□□□□ -0.87
PTPRA-203ENST00000356147 SORCS1Q8WY21 1168 aa9.62□□□□□ -0.87
PTPRA-203ENST00000356147 PLA2G12AQ9BZM1 189 aa9.62□□□□□ -0.87
PTPRA-203ENST00000356147 QRSL1Q9H0R6 528 aaKnown RBP9.62□□□□□ -0.87
PTPRA-203ENST00000356147 ANKRA2Q9H9E1 313 aa9.62□□□□□ -0.87
PTPRA-203ENST00000356147 ZNF334Q9HCZ1 680 aaPredicted RBP9.62□□□□□ -0.87
PTPRA-203ENST00000356147 HCN2Q9UL51 889 aa9.62□□□□□ -0.87
PTPRA-203ENST00000356147 LRFN2Q9ULH4 789 aa9.62□□□□□ -0.87
PTPRA-203ENST00000356147 RPL36Q9Y3U8 105 aaKnown RBP9.62□□□□□ -0.87
PTPRA-203ENST00000356147 DOCK6Q96HP0 2047 aa9.62□□□□□ -0.87
PTPRA-203ENST00000356147 ANHXE9PGG2 379 aa9.62□□□□□ -0.87
PTPRA-203ENST00000356147 H1F0P07305 194 aaKnown RBP9.62□□□□□ -0.87
PTPRA-203ENST00000356147 ARAFP10398 606 aa9.62□□□□□ -0.87
PTPRA-203ENST00000356147 MLLT3P42568 568 aaPredicted RBP9.62□□□□□ -0.87
PTPRA-203ENST00000356147 SLC9A3P48764 834 aa9.62□□□□□ -0.87
PTPRA-203ENST00000356147 HMGA2P52926 109 aa9.62□□□□□ -0.87
PTPRA-203ENST00000356147 PCBP3P57721 371 aaKnown RBP9.62□□□□□ -0.87
PTPRA-203ENST00000356147 MLLT11Q13015 90 aaPredicted RBP9.62□□□□□ -0.87
PTPRA-203ENST00000356147 SPIN4Q56A73 249 aa9.62□□□□□ -0.87
PTPRA-203ENST00000356147 TMCO2Q7Z6W1 182 aaPredicted RBP9.62□□□□□ -0.87
PTPRA-203ENST00000356147 C11orf96Q7Z7L8 435 aa9.62□□□□□ -0.87
PTPRA-203ENST00000356147 TMEM150AQ86TG1 271 aa9.62□□□□□ -0.87
PTPRA-203ENST00000356147 CBARPQ8N350 705 aaPredicted RBP9.62□□□□□ -0.87
PTPRA-203ENST00000356147 PROKR2Q8NFJ6 384 aa9.62□□□□□ -0.87
PTPRA-203ENST00000356147 ZNF480Q8WV37 535 aa9.62□□□□□ -0.87
PTPRA-203ENST00000356147 OMA1Q96E52 524 aa9.62□□□□□ -0.87
PTPRA-203ENST00000356147 SENP5Q96HI0 755 aaPredicted RBP9.62□□□□□ -0.87
PTPRA-203ENST00000356147 WDFY2Q96P53 400 aa9.62□□□□□ -0.87
PTPRA-203ENST00000356147 QRFPRQ96P65 431 aa9.62□□□□□ -0.87
PTPRA-203ENST00000356147 NARFLQ9H6Q4 476 aa9.62□□□□□ -0.87
PTPRA-203ENST00000356147 CLEC4AQ9UMR7 237 aa9.62□□□□□ -0.87
PTPRA-203ENST00000356147 YIPF1Q9Y548 306 aa9.62□□□□□ -0.87
PTPRA-203ENST00000356147 KCNE2Q9Y6J6 123 aa9.62□□□□□ -0.87
PTPRA-203ENST00000356147 MYO7AQ13402 2215 aa9.62□□□□□ -0.87
PTPRA-203ENST00000356147 SCN8AQ9UQD0 1980 aa9.61□□□□□ -0.87
PTPRA-203ENST00000356147 TRAV6A0A075B6T7 132 aa9.61□□□□□ -0.87
PTPRA-203ENST00000356147 MPZL2O60487 215 aa9.61□□□□□ -0.87
PTPRA-203ENST00000356147 SOCS5O75159 536 aa9.61□□□□□ -0.87
PTPRA-203ENST00000356147 EPHX1P07099 455 aa9.61□□□□□ -0.87
PTPRA-203ENST00000356147 ENDOUP21128 410 aaKnown RBP9.61□□□□□ -0.87
PTPRA-203ENST00000356147 ITGB7P26010 798 aa9.61□□□□□ -0.87
PTPRA-203ENST00000356147 PTX3P26022 381 aaPredicted RBP9.61□□□□□ -0.87
PTPRA-203ENST00000356147 DGKGP49619 791 aa9.61□□□□□ -0.87
PTPRA-203ENST00000356147 AGFG1P52594 562 aaKnown RBP9.61□□□□□ -0.87
PTPRA-203ENST00000356147 PRKAG1P54619 331 aa9.61□□□□□ -0.87
PTPRA-203ENST00000356147 FCHO2Q0JRZ9 810 aa9.61□□□□□ -0.87
PTPRA-203ENST00000356147 NCF4Q15080 339 aa9.61□□□□□ -0.87
PTPRA-203ENST00000356147 SYPL1Q16563 259 aa9.61□□□□□ -0.87
PTPRA-203ENST00000356147 TCTN1Q2MV58 587 aa9.61□□□□□ -0.87
PTPRA-203ENST00000356147 ZNF791Q3KP31 576 aaPredicted RBP9.61□□□□□ -0.87
PTPRA-203ENST00000356147 CRB2Q5IJ48 1285 aa9.61□□□□□ -0.87
PTPRA-203ENST00000356147 FAM205BPQ63HN1 556 aa9.61□□□□□ -0.87
PTPRA-203ENST00000356147 REEP3Q6NUK4 255 aa9.61□□□□□ -0.87
PTPRA-203ENST00000356147 C17orf99Q6UX52 265 aa9.61□□□□□ -0.87
PTPRA-203ENST00000356147 SLCO4C1Q6ZQN7 724 aa9.61□□□□□ -0.87
PTPRA-203ENST00000356147 FAM109AQ8N4B1 249 aa9.61□□□□□ -0.87
PTPRA-203ENST00000356147 RASGEF1AQ8N9B8 481 aa9.61□□□□□ -0.87
PTPRA-203ENST00000356147 SLC37A3Q8NCC5 494 aa9.61□□□□□ -0.87
PTPRA-203ENST00000356147 OR4F15Q8NGB8 312 aa9.61□□□□□ -0.87
PTPRA-203ENST00000356147 BTN2A2Q8WVV5 523 aa9.61□□□□□ -0.87
PTPRA-203ENST00000356147 XAGE5Q8WWM1 108 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms