RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 H0YGG7 62 aa16.64■□□□□ 0.25
NPAS3-202ENST00000356141 M0R3H8 397 aa16.64■□□□□ 0.25
NPAS3-202ENST00000356141 PCDH17O14917 1159 aa16.64■□□□□ 0.25
NPAS3-202ENST00000356141 PRKNO60260 465 aaPredicted RBP16.64■□□□□ 0.25
NPAS3-202ENST00000356141 HMGN2P05204 90 aaKnown RBP16.64■□□□□ 0.25
NPAS3-202ENST00000356141 ST6GAL1P15907 406 aa16.64■□□□□ 0.25
NPAS3-202ENST00000356141 RPL5P46777 297 aaKnown RBP16.64■□□□□ 0.25
NPAS3-202ENST00000356141 ARF3P61204 181 aaPredicted RBP16.64■□□□□ 0.25
NPAS3-202ENST00000356141 SELENOWP63302 87 aa16.64■□□□□ 0.25
NPAS3-202ENST00000356141 KLHL17Q6TDP4 642 aa16.64■□□□□ 0.25
NPAS3-202ENST00000356141 LACC1Q8IV20 430 aa16.64■□□□□ 0.25
NPAS3-202ENST00000356141 ZNF555Q8NEP9 628 aa16.64■□□□□ 0.25
NPAS3-202ENST00000356141 CLIP3Q96DZ5 547 aa16.64■□□□□ 0.25
NPAS3-202ENST00000356141 MRPS26Q9BYN8 205 aaKnown RBP16.64■□□□□ 0.25
NPAS3-202ENST00000356141 IFT80Q9P2H3 777 aaPredicted RBP16.64■□□□□ 0.25
NPAS3-202ENST00000356141 SNX7Q9UNH6 387 aa16.64■□□□□ 0.25
NPAS3-202ENST00000356141 LOC100130705A0A1B0GUX0 176 aa16.64■□□□□ 0.25
NPAS3-202ENST00000356141 A0A1W2PPC4 97 aa16.64■□□□□ 0.25
NPAS3-202ENST00000356141 SGK494L7N484 410 aa16.64■□□□□ 0.25
NPAS3-202ENST00000356141 MAN2B1O00754 1011 aa16.64■□□□□ 0.25
NPAS3-202ENST00000356141 NR2F1P10589 423 aa16.64■□□□□ 0.25
NPAS3-202ENST00000356141 ALDH4A1P30038 563 aa16.64■□□□□ 0.25
NPAS3-202ENST00000356141 PCBP4P57723 403 aaKnown RBP16.64■□□□□ 0.25
NPAS3-202ENST00000356141 EXOC3L2Q2M3D2 409 aa16.64■□□□□ 0.25
NPAS3-202ENST00000356141 ZC3H14Q6PJT7 736 aaKnown RBP16.64■□□□□ 0.25
NPAS3-202ENST00000356141 ABI3BPQ7Z7G0 1075 aa16.64■□□□□ 0.25
NPAS3-202ENST00000356141 DENND6BQ8NEG7 585 aa16.64■□□□□ 0.25
NPAS3-202ENST00000356141 FLVCR1-AS1Q8TAF5 88 aa16.64■□□□□ 0.25
NPAS3-202ENST00000356141 OR5P2Q8WZ92 322 aa16.64■□□□□ 0.25
NPAS3-202ENST00000356141 QRFPRQ96P65 431 aa16.64■□□□□ 0.25
NPAS3-202ENST00000356141 RBM4BQ9BQ04 359 aaKnown RBP16.64■□□□□ 0.25
NPAS3-202ENST00000356141 RBM4Q9BWF3 364 aaKnown RBP16.64■□□□□ 0.25
NPAS3-202ENST00000356141 TRPV5Q9NQA5 729 aa16.64■□□□□ 0.25
NPAS3-202ENST00000356141 TNFRSF11BO00300 401 aa16.63■□□□□ 0.25
NPAS3-202ENST00000356141 SLC35G6P0C7Q6 338 aa16.63■□□□□ 0.25
NPAS3-202ENST00000356141 BCKDHBP21953 392 aa16.63■□□□□ 0.25
NPAS3-202ENST00000356141 POU1F1P28069 291 aa16.63■□□□□ 0.25
NPAS3-202ENST00000356141 CD47Q08722 323 aa16.63■□□□□ 0.25
NPAS3-202ENST00000356141 RUNX2Q13950 521 aa16.63■□□□□ 0.25
NPAS3-202ENST00000356141 GPAT3Q53EU6 434 aa16.63■□□□□ 0.25
NPAS3-202ENST00000356141 FGD3Q5JSP0 725 aa16.63■□□□□ 0.25
NPAS3-202ENST00000356141 TMEM236Q5W0B7 351 aa16.63■□□□□ 0.25
NPAS3-202ENST00000356141 NCCRP1Q6ZVX7 275 aaPredicted RBP16.63■□□□□ 0.25
NPAS3-202ENST00000356141 SYT13Q7L8C5 426 aa16.63■□□□□ 0.25
NPAS3-202ENST00000356141 PATL1Q86TB9 770 aaKnown RBP16.63■□□□□ 0.25
NPAS3-202ENST00000356141 MFSD9Q8NBP5 474 aa16.63■□□□□ 0.25
NPAS3-202ENST00000356141 TMEM52Q8NDY8 209 aa16.63■□□□□ 0.25
NPAS3-202ENST00000356141 SUN3Q8TAQ9 357 aa16.63■□□□□ 0.25
NPAS3-202ENST00000356141 UCKL1Q9NWZ5 548 aa16.63■□□□□ 0.25
NPAS3-202ENST00000356141 SLC6A14Q9UN76 642 aa16.63■□□□□ 0.25
NPAS3-202ENST00000356141 PCDH15Q96QU1 1955 aa16.63■□□□□ 0.25
NPAS3-202ENST00000356141 NDUFB5O43674 189 aa16.63■□□□□ 0.25
NPAS3-202ENST00000356141 KRT75O95678 551 aa16.63■□□□□ 0.25
NPAS3-202ENST00000356141 MATN1P21941 496 aa16.63■□□□□ 0.25
NPAS3-202ENST00000356141 CPN2P22792 545 aa16.63■□□□□ 0.25
NPAS3-202ENST00000356141 NTSP30990 170 aa16.63■□□□□ 0.25
NPAS3-202ENST00000356141 RPL3P39023 403 aaKnown RBP16.63■□□□□ 0.25
NPAS3-202ENST00000356141 TMED1Q13445 227 aa16.63■□□□□ 0.25
NPAS3-202ENST00000356141 IKBIPQ70UQ0 350 aa16.63■□□□□ 0.25
NPAS3-202ENST00000356141 AMER2Q8N7J2 671 aa16.63■□□□□ 0.25
NPAS3-202ENST00000356141 UTP15Q8TED0 518 aaKnown RBP16.63■□□□□ 0.25
NPAS3-202ENST00000356141 SLC9A6Q92581 669 aa16.63■□□□□ 0.25
NPAS3-202ENST00000356141 SLC35G5Q96KT7 338 aa16.63■□□□□ 0.25
NPAS3-202ENST00000356141 FEVQ99581 238 aa16.63■□□□□ 0.25
NPAS3-202ENST00000356141 NIPSNAP1Q9BPW8 284 aa16.63■□□□□ 0.25
NPAS3-202ENST00000356141 NAA50Q9GZZ1 169 aaKnown RBP16.63■□□□□ 0.25
NPAS3-202ENST00000356141 KRT84Q9NSB2 600 aa16.63■□□□□ 0.25
NPAS3-202ENST00000356141 TRNAU1APQ9NX07 287 aaKnown RBP16.63■□□□□ 0.25
NPAS3-202ENST00000356141 ENTPD4Q9Y227 616 aa16.63■□□□□ 0.25
NPAS3-202ENST00000356141 ORC6Q9Y5N6 252 aa16.63■□□□□ 0.25
NPAS3-202ENST00000356141 GLULP15104 373 aa16.62■□□□□ 0.25
NPAS3-202ENST00000356141 ARHGDIAP52565 204 aa16.62■□□□□ 0.25
NPAS3-202ENST00000356141 COL19A1Q14993 1142 aa16.62■□□□□ 0.25
NPAS3-202ENST00000356141 SMAD2Q15796 467 aaKnown RBP16.62■□□□□ 0.25
NPAS3-202ENST00000356141 SYT16Q17RD7 645 aa16.62■□□□□ 0.25
NPAS3-202ENST00000356141 LEXMQ3ZCV2 418 aa16.62■□□□□ 0.25
NPAS3-202ENST00000356141 SMUG1Q53HV7 270 aa16.62■□□□□ 0.25
NPAS3-202ENST00000356141 C8orf59Q8N0T1 100 aaPredicted RBP16.62■□□□□ 0.25
NPAS3-202ENST00000356141 SLC5A8Q8N695 610 aa16.62■□□□□ 0.25
NPAS3-202ENST00000356141 OR4D11Q8NGI4 311 aa16.62■□□□□ 0.25
NPAS3-202ENST00000356141 GOT1L1Q8NHS2 421 aaPredicted RBP16.62■□□□□ 0.25
NPAS3-202ENST00000356141 OR2A5Q96R48 311 aa16.62■□□□□ 0.25
NPAS3-202ENST00000356141 CCDC3Q9BQI4 270 aa16.62■□□□□ 0.25
NPAS3-202ENST00000356141 DGCR6LQ9BY27 220 aa16.62■□□□□ 0.25
NPAS3-202ENST00000356141 POLR1BQ9H9Y6 1135 aa16.62■□□□□ 0.25
NPAS3-202ENST00000356141 AP3M1Q9Y2T2 418 aa16.62■□□□□ 0.25
NPAS3-202ENST00000356141 COL4A2P08572 1712 aa16.62■□□□□ 0.25
NPAS3-202ENST00000356141 SYNDIG1LA6NDD5 238 aa16.62■□□□□ 0.25
NPAS3-202ENST00000356141 CLDN24A6NM45 220 aa16.62■□□□□ 0.25
NPAS3-202ENST00000356141 BCKDKO14874 412 aa16.62■□□□□ 0.25
NPAS3-202ENST00000356141 IGFBP1P08833 259 aaPredicted RBP16.62■□□□□ 0.25
NPAS3-202ENST00000356141 CDH3P22223 829 aa16.62■□□□□ 0.25
NPAS3-202ENST00000356141 SHC2P98077 582 aa16.62■□□□□ 0.25
NPAS3-202ENST00000356141 MAT1AQ00266 395 aaKnown RBP16.62■□□□□ 0.25
NPAS3-202ENST00000356141 FZD5Q13467 585 aa16.62■□□□□ 0.25
NPAS3-202ENST00000356141 APOFQ13790 326 aa16.62■□□□□ 0.25
NPAS3-202ENST00000356141 VEZF1Q14119 521 aa16.62■□□□□ 0.25
NPAS3-202ENST00000356141 PUM1Q14671 1186 aaKnown RBP eCLIP16.62■□□□□ 0.25
NPAS3-202ENST00000356141 CCNJQ5T5M9 372 aa16.62■□□□□ 0.25
NPAS3-202ENST00000356141 IRAK1BP1Q5VVH5 260 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms