RNA–Protein interactions for RNA: ENST00000350697.7

SEC13-202, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SEC13, Length 1,425 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-202ENST00000350697 GFM2Q969S9 779 aaKnown RBP13.01□□□□□ -0.33
SEC13-202ENST00000350697 EXOSC8Q96B26 276 aaKnown RBP13.01□□□□□ -0.33
SEC13-202ENST00000350697 PPWD1Q96BP3 646 aaKnown RBP13.01□□□□□ -0.33
SEC13-202ENST00000350697 CNRIP1Q96F85 164 aaPredicted RBP13.01□□□□□ -0.33
SEC13-202ENST00000350697 ZNF764Q96H86 408 aaPredicted RBP13.01□□□□□ -0.33
SEC13-202ENST00000350697 NUDT9Q9BW91 350 aa13.01□□□□□ -0.33
SEC13-202ENST00000350697 REEP4Q9H6H4 257 aa13.01□□□□□ -0.33
SEC13-202ENST00000350697 WDR55Q9H6Y2 383 aaPredicted RBP13.01□□□□□ -0.33
SEC13-202ENST00000350697 ZNF552Q9H707 407 aaPredicted RBP13.01□□□□□ -0.33
SEC13-202ENST00000350697 SLC35C2Q9NQQ7 365 aa13.01□□□□□ -0.33
SEC13-202ENST00000350697 EXO1Q9UQ84 846 aaKnown RBP13.01□□□□□ -0.33
SEC13-202ENST00000350697 ENTPD4Q9Y227 616 aa13.01□□□□□ -0.33
SEC13-202ENST00000350697 USH1CQ9Y6N9 552 aa13.01□□□□□ -0.33
SEC13-202ENST00000350697 CHD6Q8TD26 2715 aa13.01□□□□□ -0.33
SEC13-202ENST00000350697 SPTA1P02549 2419 aa13□□□□□ -0.33
SEC13-202ENST00000350697 TCP11X1B4DZS4 312 aa13□□□□□ -0.33
SEC13-202ENST00000350697 ATXN7O15265 892 aaPredicted RBP13□□□□□ -0.33
SEC13-202ENST00000350697 TGDSO95455 350 aa13□□□□□ -0.33
SEC13-202ENST00000350697 FEN1P39748 380 aaKnown RBP13□□□□□ -0.33
SEC13-202ENST00000350697 GPR143P51810 404 aa13□□□□□ -0.33
SEC13-202ENST00000350697 SPRED3Q2MJR0 410 aa13□□□□□ -0.33
SEC13-202ENST00000350697 ZNF750Q32MQ0 723 aa13□□□□□ -0.33
SEC13-202ENST00000350697 GLIPR1L2Q4G1C9 344 aa13□□□□□ -0.33
SEC13-202ENST00000350697 AGAP7PQ5VUJ5 663 aa13□□□□□ -0.33
SEC13-202ENST00000350697 TCTN3Q6NUS6 607 aa13□□□□□ -0.33
SEC13-202ENST00000350697 MAVSQ7Z434 540 aa13□□□□□ -0.33
SEC13-202ENST00000350697 R3HCC1LQ7Z5L2 792 aaKnown RBP13□□□□□ -0.33
SEC13-202ENST00000350697 LRRC25Q8N386 305 aaPredicted RBP13□□□□□ -0.33
SEC13-202ENST00000350697 LSM14AQ8ND56 463 aaKnown RBP13□□□□□ -0.33
SEC13-202ENST00000350697 C9orf43Q8TAL5 461 aaPredicted RBP13□□□□□ -0.33
SEC13-202ENST00000350697 SLC2A12Q8TD20 617 aa13□□□□□ -0.33
SEC13-202ENST00000350697 BRIX1Q8TDN6 353 aaKnown RBP13□□□□□ -0.33
SEC13-202ENST00000350697 RIT1Q92963 219 aa13□□□□□ -0.33
SEC13-202ENST00000350697 NCLNQ969V3 563 aa13□□□□□ -0.33
SEC13-202ENST00000350697 MTERF3Q96E29 417 aa13□□□□□ -0.33
SEC13-202ENST00000350697 VMP1Q96GC9 406 aa13□□□□□ -0.33
SEC13-202ENST00000350697 MAELQ96JY0 434 aaKnown RBP13□□□□□ -0.33
SEC13-202ENST00000350697 ART5Q96L15 291 aa13□□□□□ -0.33
SEC13-202ENST00000350697 ZNF681Q96N22 645 aa13□□□□□ -0.33
SEC13-202ENST00000350697 AGAP4Q96P64 663 aa13□□□□□ -0.33
SEC13-202ENST00000350697 SMAD5Q99717 465 aaKnown RBP13□□□□□ -0.33
SEC13-202ENST00000350697 SEMA4CQ9C0C4 833 aa13□□□□□ -0.33
SEC13-202ENST00000350697 OR8D2Q9GZM6 311 aa13□□□□□ -0.33
SEC13-202ENST00000350697 CXorf21Q9HAI6 301 aa13□□□□□ -0.33
SEC13-202ENST00000350697 KCNK13Q9HB14 408 aa13□□□□□ -0.33
SEC13-202ENST00000350697 PCDHGB7Q9Y5F8 929 aa13□□□□□ -0.33
SEC13-202ENST00000350697 GOLGA8QA0A0J9YX86 632 aa12.99□□□□□ -0.33
SEC13-202ENST00000350697 GOLGA8OA6NCC3 632 aa12.99□□□□□ -0.33
SEC13-202ENST00000350697 GOLGA8NF8WBI6 632 aa12.99□□□□□ -0.33
SEC13-202ENST00000350697 NDUFAB1O14561 156 aa12.99□□□□□ -0.33
SEC13-202ENST00000350697 AKAP10O43572 662 aa12.99□□□□□ -0.33
SEC13-202ENST00000350697 TBX19O60806 448 aa12.99□□□□□ -0.33
SEC13-202ENST00000350697 EDF1O60869 148 aaKnown RBP12.99□□□□□ -0.33
SEC13-202ENST00000350697 DIAPH2O60879 1101 aa12.99□□□□□ -0.33
SEC13-202ENST00000350697 LRATO95237 230 aa12.99□□□□□ -0.33
SEC13-202ENST00000350697 DDAH2O95865 285 aa12.99□□□□□ -0.33
SEC13-202ENST00000350697 FAM107AO95990 144 aa12.99□□□□□ -0.33
SEC13-202ENST00000350697 ATP1B1P05026 303 aa12.99□□□□□ -0.33
SEC13-202ENST00000350697 G6PDP11413 515 aa12.99□□□□□ -0.33
SEC13-202ENST00000350697 DDX5P17844 614 aaKnown RBP12.99□□□□□ -0.33
SEC13-202ENST00000350697 HPCAL1P37235 193 aa12.99□□□□□ -0.33
SEC13-202ENST00000350697 RPL3P39023 403 aaKnown RBP12.99□□□□□ -0.33
SEC13-202ENST00000350697 CLCN2P51788 898 aa12.99□□□□□ -0.33
SEC13-202ENST00000350697 PGDP52209 483 aa12.99□□□□□ -0.33
SEC13-202ENST00000350697 DIO3P55073 304 aa12.99□□□□□ -0.33
SEC13-202ENST00000350697 PDE7AQ13946 482 aa12.99□□□□□ -0.33
SEC13-202ENST00000350697 PTGR1Q14914 329 aa12.99□□□□□ -0.33
SEC13-202ENST00000350697 CEBPEQ15744 281 aa12.99□□□□□ -0.33
SEC13-202ENST00000350697 SLC9B1Q4ZJI4 515 aa12.99□□□□□ -0.33
SEC13-202ENST00000350697 CRB2Q5IJ48 1285 aa12.99□□□□□ -0.33
SEC13-202ENST00000350697 C6orf163Q5TEZ5 329 aa12.99□□□□□ -0.33
SEC13-202ENST00000350697 H3F3CQ6NXT2 135 aa12.99□□□□□ -0.33
SEC13-202ENST00000350697 FAM180BQ6P0A1 224 aa12.99□□□□□ -0.33
SEC13-202ENST00000350697 EPGNQ6UW88 154 aa12.99□□□□□ -0.33
SEC13-202ENST00000350697 DGAT2L6Q6ZPD8 337 aa12.99□□□□□ -0.33
SEC13-202ENST00000350697 SPATA19Q7Z5L4 167 aa12.99□□□□□ -0.33
SEC13-202ENST00000350697 GALNT12Q8IXK2 581 aa12.99□□□□□ -0.33
SEC13-202ENST00000350697 FAM9CQ8IZT9 166 aa12.99□□□□□ -0.33
SEC13-202ENST00000350697 SIRT6Q8N6T7 355 aa12.99□□□□□ -0.33
SEC13-202ENST00000350697 OR1N1Q8NGS0 311 aa12.99□□□□□ -0.33
SEC13-202ENST00000350697 CEP70Q8NHQ1 597 aa12.99□□□□□ -0.33
SEC13-202ENST00000350697 BCAS4Q8TDM0 211 aa12.99□□□□□ -0.33
SEC13-202ENST00000350697 ACTRT2Q8TDY3 377 aa12.99□□□□□ -0.33
SEC13-202ENST00000350697 PPCDCQ96CD2 204 aa12.99□□□□□ -0.33
SEC13-202ENST00000350697 CHMP6Q96FZ7 201 aa12.99□□□□□ -0.33
SEC13-202ENST00000350697 SENP5Q96HI0 755 aaPredicted RBP12.99□□□□□ -0.33
SEC13-202ENST00000350697 FBXL20Q96IG2 436 aa12.99□□□□□ -0.33
SEC13-202ENST00000350697 BBS4Q96RK4 519 aa12.99□□□□□ -0.33
SEC13-202ENST00000350697 COPS7AQ9UBW8 275 aa12.99□□□□□ -0.33
SEC13-202ENST00000350697 ZNF451Q9Y4E5 1061 aa12.99□□□□□ -0.33
SEC13-202ENST00000350697 TRBV11-1A0A0K0K1C0 115 aa12.98□□□□□ -0.33
SEC13-202ENST00000350697 GABRR3A8MPY1 467 aa12.98□□□□□ -0.33
SEC13-202ENST00000350697 SCAMP2O15127 329 aaKnown RBP12.98□□□□□ -0.33
SEC13-202ENST00000350697 IGKV3-11P04433 115 aa12.98□□□□□ -0.33
SEC13-202ENST00000350697 PCSK2P16519 638 aa12.98□□□□□ -0.33
SEC13-202ENST00000350697 PRPS1L1P21108 318 aa12.98□□□□□ -0.33
SEC13-202ENST00000350697 NT5EP21589 574 aa12.98□□□□□ -0.33
SEC13-202ENST00000350697 NTSP30990 170 aa12.98□□□□□ -0.33
SEC13-202ENST00000350697 MPIP34949 423 aa12.98□□□□□ -0.33
SEC13-202ENST00000350697 SOX11P35716 441 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms