RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 GEMIN6Q8WXD5 167 aaKnown RBP6.53□□□□□ -1.36
TRIM55-203ENST00000350034 LZICQ8WZA0 190 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 HDAC2Q92769 488 aaKnown RBP6.53□□□□□ -1.36
TRIM55-203ENST00000350034 MOAP1Q96BY2 351 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 DGCR14Q96DF8 476 aaKnown RBP6.53□□□□□ -1.36
TRIM55-203ENST00000350034 TMEM19Q96HH6 336 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 TPD52L3Q96J77 140 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 ZNF300Q96RE9 604 aaPredicted RBP6.53□□□□□ -1.36
TRIM55-203ENST00000350034 MYCBPQ99417 103 aaPredicted RBP6.53□□□□□ -1.36
TRIM55-203ENST00000350034 PITX2Q99697 317 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 ZFYVE21Q9BQ24 234 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 PSD2Q9BQI7 771 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 TPSD1Q9BZJ3 242 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 FOXQ1Q9C009 403 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 GRIP2Q9C0E4 1043 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 REEP1Q9H902 201 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 IL21RQ9HBE5 538 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 LYRM4Q9HD34 91 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 BCL2L10Q9HD36 194 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 SEMA3GQ9NS98 782 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 DDX18Q9NVP1 670 aaKnown RBP6.53□□□□□ -1.36
TRIM55-203ENST00000350034 PDP1Q9P0J1 537 aaPredicted RBP6.53□□□□□ -1.36
TRIM55-203ENST00000350034 PHF11Q9UIL8 331 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 KCND3Q9UK17 655 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 FBXW2Q9UKT8 454 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 POMT2Q9UKY4 750 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 BAG5Q9UL15 447 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 SAMHD1Q9Y3Z3 626 aaKnown RBP6.53□□□□□ -1.36
TRIM55-203ENST00000350034 SNX8Q9Y5X2 465 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 LYVE1Q9Y5Y7 322 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 ENPP4Q9Y6X5 453 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 BRWD1Q9NSI6 2320 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 LOC100130705A0A1B0GUX0 176 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 A0A1W2PS29 197 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 EME2A4GXA9 379 aaPredicted RBP6.52□□□□□ -1.37
TRIM55-203ENST00000350034 URADA6NGE7 173 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 LILRA5A6NI73 299 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 GLOD5A6NK44 160 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 AXIN1O15169 862 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 ZSCAN9O15535 394 aaPredicted RBP6.52□□□□□ -1.37
TRIM55-203ENST00000350034 EMC8O43402 210 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 SH3BP5O60239 455 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 HS6ST1O60243 411 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 DNAJB6O75190 326 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 UGT2B11O75310 529 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 PDE9AO76083 593 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 OR6B1O95007 311 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 BCHEP06276 602 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 FHP07954 510 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 OR12D1P0DN82 309 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 CTSEP14091 401 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 PVRP15151 417 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 ITGA2P17301 1181 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 JUNDP17535 347 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 ALOX12P18054 663 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 RHCEP18577 417 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 IGFBP5P24593 272 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 CD38P28907 300 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 RRM2P31350 389 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 SOX18P35713 384 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 POLR2IP36954 125 aaKnown RBP6.52□□□□□ -1.37
TRIM55-203ENST00000350034 KCNJ5P48544 419 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 MAN2A2P49641 1150 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 CLK3P49761 638 aaKnown RBP6.52□□□□□ -1.37
TRIM55-203ENST00000350034 KHKP50053 298 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 ARHGDIAP52565 204 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 CDH15P55291 814 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 LIM2P55344 173 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 ISL1P61371 349 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 RACK1P63244 317 aaKnown RBP6.52□□□□□ -1.37
TRIM55-203ENST00000350034 TNFRSF17Q02223 184 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 HHEXQ03014 270 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 KCNC4Q03721 635 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 CD47Q08722 323 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 C1orf61Q13536 156 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 KEAP1Q14145 624 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 PUM1Q14671 1186 aaKnown RBP eCLIP6.52□□□□□ -1.37
TRIM55-203ENST00000350034 GPR19Q15760 415 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 DUSP7Q16829 419 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 PRTGQ2VWP7 1150 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 ZNF750Q32MQ0 723 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 CNPY1Q3B7I2 92 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 SPDYE7PQ495Y7 208 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 RPS26P11Q5JNZ5 115 aaPredicted RBP6.52□□□□□ -1.37
TRIM55-203ENST00000350034 EXOSC6Q5RKV6 272 aaKnown RBP6.52□□□□□ -1.37
TRIM55-203ENST00000350034 RBM48Q5RL73 367 aaKnown RBP6.52□□□□□ -1.37
TRIM55-203ENST00000350034 ZNF691Q5VV52 312 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 FRMPD2BQ6IN97 320 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 BHLHB9Q6PI77 547 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 OGFOD3Q6PK18 319 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 USP53Q70EK8 1073 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 DGLUCYQ7Z3D6 616 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 OOSP2Q86WS3 158 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 CCDC116Q8IYX3 515 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 SAMD14Q8IZD0 417 aaPredicted RBP6.52□□□□□ -1.37
TRIM55-203ENST00000350034 C8orf59Q8N0T1 100 aaPredicted RBP6.52□□□□□ -1.37
TRIM55-203ENST00000350034 LGI4Q8N135 537 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 SDR16C5Q8N3Y7 309 aa6.52□□□□□ -1.37
TRIM55-203ENST00000350034 CHDHQ8NE62 594 aaPredicted RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms