RNA–Protein interactions for RNA: ENST00000349780.8

CDK5RAP2-201, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDK5RAP2, Length 6,228 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-201ENST00000349780 IDH3GP51553 393 aaPredicted RBP11.3□□□□□ -0.6
CDK5RAP2-201ENST00000349780 ABCA11PQ4W5N1 156 aa11.3□□□□□ -0.6
CDK5RAP2-201ENST00000349780 TANGO2Q6ICL3 276 aa11.3□□□□□ -0.6
CDK5RAP2-201ENST00000349780 H3F3CQ6NXT2 135 aa11.3□□□□□ -0.6
CDK5RAP2-201ENST00000349780 TMUB2Q71RG4 321 aa11.3□□□□□ -0.6
CDK5RAP2-201ENST00000349780 SHFQ7M4L6 423 aa11.3□□□□□ -0.6
CDK5RAP2-201ENST00000349780 OR13C4Q8NGS5 318 aa11.3□□□□□ -0.6
CDK5RAP2-201ENST00000349780 ADAM2Q99965 735 aa11.3□□□□□ -0.6
CDK5RAP2-201ENST00000349780 P2RY13Q9BPV8 354 aa11.3□□□□□ -0.6
CDK5RAP2-201ENST00000349780 ACOXLQ9NUZ1 547 aa11.3□□□□□ -0.6
CDK5RAP2-201ENST00000349780 MRPS23Q9Y3D9 190 aaKnown RBP11.3□□□□□ -0.6
CDK5RAP2-201ENST00000349780 FAAHO00519 579 aa11.3□□□□□ -0.6
CDK5RAP2-201ENST00000349780 RBMS1P29558 406 aaKnown RBP11.3□□□□□ -0.6
CDK5RAP2-201ENST00000349780 ACVR1BP36896 505 aa11.3□□□□□ -0.6
CDK5RAP2-201ENST00000349780 POLR2IP36954 125 aaKnown RBP11.3□□□□□ -0.6
CDK5RAP2-201ENST00000349780 DPP6P42658 865 aa11.3□□□□□ -0.6
CDK5RAP2-201ENST00000349780 NR0B1P51843 470 aaKnown RBP11.3□□□□□ -0.6
CDK5RAP2-201ENST00000349780 MGAT3Q09327 533 aa11.3□□□□□ -0.6
CDK5RAP2-201ENST00000349780 TUBB3Q13509 450 aa11.3□□□□□ -0.6
CDK5RAP2-201ENST00000349780 LY6KQ17RY6 165 aa11.3□□□□□ -0.6
CDK5RAP2-201ENST00000349780 RAB41Q5JT25 222 aa11.3□□□□□ -0.6
CDK5RAP2-201ENST00000349780 NUDT18Q6ZVK8 323 aa11.3□□□□□ -0.6
CDK5RAP2-201ENST00000349780 TRIM46Q7Z4K8 759 aa11.3□□□□□ -0.6
CDK5RAP2-201ENST00000349780 RANBP3LQ86VV4 465 aaPredicted RBP11.3□□□□□ -0.6
CDK5RAP2-201ENST00000349780 ATCAYQ86WG3 371 aa11.3□□□□□ -0.6
CDK5RAP2-201ENST00000349780 CILP2Q8IUL8 1156 aa11.3□□□□□ -0.6
CDK5RAP2-201ENST00000349780 MRPS31Q92665 395 aaKnown RBP11.3□□□□□ -0.6
CDK5RAP2-201ENST00000349780 SLC38A3Q99624 504 aa11.3□□□□□ -0.6
CDK5RAP2-201ENST00000349780 GORASP2Q9H8Y8 452 aa11.3□□□□□ -0.6
CDK5RAP2-201ENST00000349780 ADAM18Q9Y3Q7 739 aa11.3□□□□□ -0.6
CDK5RAP2-201ENST00000349780 PTHP01270 115 aa11.29□□□□□ -0.6
CDK5RAP2-201ENST00000349780 MRPL3P09001 348 aaKnown RBP11.29□□□□□ -0.6
CDK5RAP2-201ENST00000349780 TYRP14679 529 aa11.29□□□□□ -0.6
CDK5RAP2-201ENST00000349780 BAMBIQ13145 260 aa11.29□□□□□ -0.6
CDK5RAP2-201ENST00000349780 SP140Q13342 867 aa11.29□□□□□ -0.6
CDK5RAP2-201ENST00000349780 CBFBQ13951 182 aa11.29□□□□□ -0.6
CDK5RAP2-201ENST00000349780 ZNF630Q2M218 657 aaPredicted RBP11.29□□□□□ -0.6
CDK5RAP2-201ENST00000349780 EEF1DP3Q658K8 133 aa11.29□□□□□ -0.6
CDK5RAP2-201ENST00000349780 RPL13AP3Q6NVV1 102 aa11.29□□□□□ -0.6
CDK5RAP2-201ENST00000349780 BEND4Q6ZU67 534 aa11.29□□□□□ -0.6
CDK5RAP2-201ENST00000349780 GNPDA2Q8TDQ7 276 aa11.29□□□□□ -0.6
CDK5RAP2-201ENST00000349780 SAP130Q9H0E3 1048 aa11.29□□□□□ -0.6
CDK5RAP2-201ENST00000349780 TCEAL2Q9H3H9 227 aaPredicted RBP11.29□□□□□ -0.6
CDK5RAP2-201ENST00000349780 GPATCH2Q9NW75 528 aa11.29□□□□□ -0.6
CDK5RAP2-201ENST00000349780 CIB4A0PJX0 185 aa11.29□□□□□ -0.6
CDK5RAP2-201ENST00000349780 PCDH7O60245 1069 aa11.29□□□□□ -0.6
CDK5RAP2-201ENST00000349780 CBSLP0DN79 551 aa11.29□□□□□ -0.6
CDK5RAP2-201ENST00000349780 CBSP35520 551 aa11.29□□□□□ -0.6
CDK5RAP2-201ENST00000349780 PIGAP37287 484 aa11.29□□□□□ -0.6
CDK5RAP2-201ENST00000349780 RAB13P51153 203 aa11.29□□□□□ -0.6
CDK5RAP2-201ENST00000349780 CLLU1Q5K131 121 aa11.29□□□□□ -0.6
CDK5RAP2-201ENST00000349780 TBPL2Q6SJ96 375 aa11.29□□□□□ -0.6
CDK5RAP2-201ENST00000349780 EPYCQ99645 322 aa11.29□□□□□ -0.6
CDK5RAP2-201ENST00000349780 ZNF214Q9UL59 606 aaPredicted RBP11.29□□□□□ -0.6
CDK5RAP2-201ENST00000349780 SCML2Q9UQR0 700 aa11.29□□□□□ -0.6
CDK5RAP2-201ENST00000349780 LRIT2A6NDA9 550 aa11.29□□□□□ -0.6
CDK5RAP2-201ENST00000349780 LOC730098B7Z3J9 87 aa11.29□□□□□ -0.6
CDK5RAP2-201ENST00000349780 HAS3O00219 553 aa11.29□□□□□ -0.6
CDK5RAP2-201ENST00000349780 PNPP00491 289 aa11.29□□□□□ -0.6
CDK5RAP2-201ENST00000349780 ACSM4P0C7M7 580 aa11.29□□□□□ -0.6
CDK5RAP2-201ENST00000349780 CD1DP15813 335 aa11.29□□□□□ -0.6
CDK5RAP2-201ENST00000349780 CRISP3P54108 245 aa11.29□□□□□ -0.6
CDK5RAP2-201ENST00000349780 PSPHP78330 225 aa11.29□□□□□ -0.6
CDK5RAP2-201ENST00000349780 TRAM2Q15035 370 aa11.29□□□□□ -0.6
CDK5RAP2-201ENST00000349780 OR10K2Q6IF99 312 aa11.29□□□□□ -0.6
CDK5RAP2-201ENST00000349780 NLRP8Q86W28 1048 aa11.29□□□□□ -0.6
CDK5RAP2-201ENST00000349780 LRRC28Q86X40 367 aaPredicted RBP11.29□□□□□ -0.6
CDK5RAP2-201ENST00000349780 ADGRG3Q86Y34 549 aa11.29□□□□□ -0.6
CDK5RAP2-201ENST00000349780 SLC6A7Q99884 636 aa11.29□□□□□ -0.6
CDK5RAP2-201ENST00000349780 MICU1Q9BPX6 476 aa11.29□□□□□ -0.6
CDK5RAP2-201ENST00000349780 CNOT2Q9NZN8 540 aaKnown RBP11.29□□□□□ -0.6
CDK5RAP2-201ENST00000349780 ZNF780BQ9Y6R6 833 aa11.29□□□□□ -0.6
CDK5RAP2-201ENST00000349780 TUBAL3A6NHL2 446 aa11.29□□□□□ -0.6
CDK5RAP2-201ENST00000349780 SLC10A3P09131 477 aa11.29□□□□□ -0.6
CDK5RAP2-201ENST00000349780 ETV6P41212 452 aa11.29□□□□□ -0.6
CDK5RAP2-201ENST00000349780 BTG1P62324 171 aa11.29□□□□□ -0.6
CDK5RAP2-201ENST00000349780 MICAQ29983 383 aa11.29□□□□□ -0.6
CDK5RAP2-201ENST00000349780 USP41Q3LFD5 358 aa11.29□□□□□ -0.6
CDK5RAP2-201ENST00000349780 PRAMEF18Q5VWM3 479 aa11.29□□□□□ -0.6
CDK5RAP2-201ENST00000349780 TMEM81Q6P7N7 255 aa11.29□□□□□ -0.6
CDK5RAP2-201ENST00000349780 CLEC9AQ6UXN8 241 aa11.29□□□□□ -0.6
CDK5RAP2-201ENST00000349780 SLC16A13Q7RTY0 426 aa11.29□□□□□ -0.6
CDK5RAP2-201ENST00000349780 MZB1Q8WU39 189 aa11.29□□□□□ -0.6
CDK5RAP2-201ENST00000349780 SMAP2Q8WU79 429 aaPredicted RBP11.29□□□□□ -0.6
CDK5RAP2-201ENST00000349780 MYO19Q96H55 970 aa11.29□□□□□ -0.6
CDK5RAP2-201ENST00000349780 GAREM1Q9H706 876 aa11.29□□□□□ -0.6
CDK5RAP2-201ENST00000349780 VPS29Q9UBQ0 182 aa11.29□□□□□ -0.6
CDK5RAP2-201ENST00000349780 FKBPLQ9UIM3 349 aa11.29□□□□□ -0.6
CDK5RAP2-201ENST00000349780 ANKRD26Q9UPS8 1709 aa11.29□□□□□ -0.6
CDK5RAP2-201ENST00000349780 POM121BA6NF01 834 aa11.29□□□□□ -0.6
CDK5RAP2-201ENST00000349780 ZNF98A6NK75 572 aa11.29□□□□□ -0.6
CDK5RAP2-201ENST00000349780 MAFO75444 373 aaPredicted RBP11.29□□□□□ -0.6
CDK5RAP2-201ENST00000349780 CYB5AP00167 134 aa11.29□□□□□ -0.6
CDK5RAP2-201ENST00000349780 UCHL1P09936 223 aa11.29□□□□□ -0.6
CDK5RAP2-201ENST00000349780 PTGER3P43115 390 aa11.29□□□□□ -0.6
CDK5RAP2-201ENST00000349780 KHKP50053 298 aa11.29□□□□□ -0.6
CDK5RAP2-201ENST00000349780 TAP2Q03519 686 aa11.29□□□□□ -0.6
CDK5RAP2-201ENST00000349780 VARS2Q5ST30 1063 aaKnown RBP11.29□□□□□ -0.6
CDK5RAP2-201ENST00000349780 NPAS3Q8IXF0 933 aa11.29□□□□□ -0.6
CDK5RAP2-201ENST00000349780 OSTF1Q92882 214 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms