RNA–Protein interactions for RNA: ENST00000349225.2

RLIM-202, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RLIM, Length 3,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-202ENST00000349225 PTPN5P54829 565 aa13.54□□□□□ -0.24
RLIM-202ENST00000349225 WNT4P56705 351 aa13.54□□□□□ -0.24
RLIM-202ENST00000349225 ERVK-21P61565 698 aa13.54□□□□□ -0.24
RLIM-202ENST00000349225 SCARB2Q14108 478 aa13.54□□□□□ -0.24
RLIM-202ENST00000349225 SYT14P1Q58G82 188 aa13.54□□□□□ -0.24
RLIM-202ENST00000349225 BHLHB9Q6PI77 547 aa13.54□□□□□ -0.24
RLIM-202ENST00000349225 NXPE2Q96DL1 559 aa13.54□□□□□ -0.24
RLIM-202ENST00000349225 SORBS1Q9BX66 1292 aaKnown RBP13.54□□□□□ -0.24
RLIM-202ENST00000349225 CLEC4MQ9H2X3 399 aaPredicted RBP13.54□□□□□ -0.24
RLIM-202ENST00000349225 ZSCAN32Q9NX65 697 aa13.54□□□□□ -0.24
RLIM-202ENST00000349225 STON1Q9Y6Q2 735 aa13.54□□□□□ -0.24
RLIM-202ENST00000349225 CKAP5Q14008 2032 aa13.54□□□□□ -0.24
RLIM-202ENST00000349225 SCAMP2O15127 329 aaKnown RBP13.54□□□□□ -0.24
RLIM-202ENST00000349225 SIGLEC5O15389 551 aa13.54□□□□□ -0.24
RLIM-202ENST00000349225 TLX2O43763 284 aaPredicted RBP13.54□□□□□ -0.24
RLIM-202ENST00000349225 FGF9P31371 208 aaPredicted RBP13.54□□□□□ -0.24
RLIM-202ENST00000349225 NUP62P37198 522 aaPredicted RBP13.54□□□□□ -0.24
RLIM-202ENST00000349225 SELENOPP49908 381 aa13.54□□□□□ -0.24
RLIM-202ENST00000349225 SIGLEC14Q08ET2 396 aa13.54□□□□□ -0.24
RLIM-202ENST00000349225 ILKQ13418 452 aa13.54□□□□□ -0.24
RLIM-202ENST00000349225 TPBGQ13641 420 aa13.54□□□□□ -0.24
RLIM-202ENST00000349225 CRB2Q5IJ48 1285 aa13.54□□□□□ -0.24
RLIM-202ENST00000349225 ZNF687Q8N1G0 1237 aa13.54□□□□□ -0.24
RLIM-202ENST00000349225 ANKRD53Q8N9V6 530 aa13.54□□□□□ -0.24
RLIM-202ENST00000349225 ZNF485Q8NCK3 441 aa13.54□□□□□ -0.24
RLIM-202ENST00000349225 C7orf57Q8NEG2 295 aa13.54□□□□□ -0.24
RLIM-202ENST00000349225 ASIC4Q96FT7 647 aa13.54□□□□□ -0.24
RLIM-202ENST00000349225 SAP130Q9H0E3 1048 aa13.54□□□□□ -0.24
RLIM-202ENST00000349225 ZNF175Q9Y473 711 aa13.54□□□□□ -0.24
RLIM-202ENST00000349225 KLF2Q9Y5W3 355 aaPredicted RBP13.54□□□□□ -0.24
RLIM-202ENST00000349225 ENPP4Q9Y6X5 453 aa13.54□□□□□ -0.24
RLIM-202ENST00000349225 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.54□□□□□ -0.24
RLIM-202ENST00000349225 NPIPB8E9PQR5 432 aa13.54□□□□□ -0.24
RLIM-202ENST00000349225 SLC25A27O95847 323 aa13.54□□□□□ -0.24
RLIM-202ENST00000349225 TRBC1P01850 177 aa13.54□□□□□ -0.24
RLIM-202ENST00000349225 HBA1P69905 142 aa13.54□□□□□ -0.24
RLIM-202ENST00000349225 CACNG1Q06432 222 aa13.54□□□□□ -0.24
RLIM-202ENST00000349225 BCL2L1Q07817 233 aa13.54□□□□□ -0.24
RLIM-202ENST00000349225 DSG2Q14126 1118 aa13.54□□□□□ -0.24
RLIM-202ENST00000349225 VASNQ6EMK4 673 aa13.54□□□□□ -0.24
RLIM-202ENST00000349225 SCN4BQ8IWT1 228 aa13.54□□□□□ -0.24
RLIM-202ENST00000349225 OR4K1Q8NGD4 311 aa13.54□□□□□ -0.24
RLIM-202ENST00000349225 WDR48Q8TAF3 677 aa13.54□□□□□ -0.24
RLIM-202ENST00000349225 GIMAP5Q96F15 307 aa13.54□□□□□ -0.24
RLIM-202ENST00000349225 FOPNLQ96NB1 174 aa13.54□□□□□ -0.24
RLIM-202ENST00000349225 MTERF1Q99551 399 aaKnown RBP13.54□□□□□ -0.24
RLIM-202ENST00000349225 THAP7Q9BT49 309 aaPredicted RBP13.54□□□□□ -0.24
RLIM-202ENST00000349225 LATS2Q9NRM7 1088 aa13.54□□□□□ -0.24
RLIM-202ENST00000349225 KCND3Q9UK17 655 aa13.54□□□□□ -0.24
RLIM-202ENST00000349225 MBLAC1A4D2B0 266 aaPredicted RBP13.53□□□□□ -0.24
RLIM-202ENST00000349225 RAB36O95755 333 aa13.53□□□□□ -0.24
RLIM-202ENST00000349225 THP07101 528 aa13.53□□□□□ -0.24
RLIM-202ENST00000349225 ALPIP09923 528 aa13.53□□□□□ -0.24
RLIM-202ENST00000349225 DNASE1P24855 282 aa13.53□□□□□ -0.24
RLIM-202ENST00000349225 MAPK1P28482 360 aa13.53□□□□□ -0.24
RLIM-202ENST00000349225 ATP12AP54707 1039 aa13.53□□□□□ -0.24
RLIM-202ENST00000349225 HEPACAMQ14CZ8 416 aa13.53□□□□□ -0.24
RLIM-202ENST00000349225 CD276Q5ZPR3 534 aa13.53□□□□□ -0.24
RLIM-202ENST00000349225 FRG2Q64ET8 278 aa13.53□□□□□ -0.24
RLIM-202ENST00000349225 BICRALQ6AI39 1079 aa13.53□□□□□ -0.24
RLIM-202ENST00000349225 RASGRP3Q8IV61 690 aa13.53□□□□□ -0.24
RLIM-202ENST00000349225 NPAS3Q8IXF0 933 aa13.53□□□□□ -0.24
RLIM-202ENST00000349225 ZBTB2Q8N680 514 aa13.53□□□□□ -0.24
RLIM-202ENST00000349225 CSGALNACT1Q8TDX6 532 aa13.53□□□□□ -0.24
RLIM-202ENST00000349225 APOBEC4Q8WW27 367 aaKnown RBP13.53□□□□□ -0.24
RLIM-202ENST00000349225 FRG2BQ96QU4 278 aa13.53□□□□□ -0.24
RLIM-202ENST00000349225 LDAHQ9H6V9 325 aa13.53□□□□□ -0.24
RLIM-202ENST00000349225 TVP23BQ9NYZ1 205 aa13.53□□□□□ -0.24
RLIM-202ENST00000349225 EXTL2Q9UBQ6 330 aa13.53□□□□□ -0.24
RLIM-202ENST00000349225 AFF4Q9UHB7 1163 aaKnown RBP13.53□□□□□ -0.24
RLIM-202ENST00000349225 COPS3Q9UNS2 423 aa13.53□□□□□ -0.24
RLIM-202ENST00000349225 RNF215Q9Y6U7 377 aa13.53□□□□□ -0.24
RLIM-202ENST00000349225 TDRD15B5MCY1 1934 aaKnown RBP13.53□□□□□ -0.24
RLIM-202ENST00000349225 SMIM35A0A1B0GVV1 85 aa13.53□□□□□ -0.24
RLIM-202ENST00000349225 H3BN98 237 aa13.53□□□□□ -0.24
RLIM-202ENST00000349225 SLC30A4O14863 429 aa13.53□□□□□ -0.24
RLIM-202ENST00000349225 AOAHP28039 575 aa13.53□□□□□ -0.24
RLIM-202ENST00000349225 CHI3L1P36222 383 aaPredicted RBP13.53□□□□□ -0.24
RLIM-202ENST00000349225 DCDC1P59894 354 aa13.53□□□□□ -0.24
RLIM-202ENST00000349225 SLC36A2Q495M3 483 aa13.53□□□□□ -0.24
RLIM-202ENST00000349225 GGTA1PQ4G0N0 100 aa13.53□□□□□ -0.24
RLIM-202ENST00000349225 RGS7BPQ6MZT1 257 aaPredicted RBP13.53□□□□□ -0.24
RLIM-202ENST00000349225 SLC30A8Q8IWU4 369 aa13.53□□□□□ -0.24
RLIM-202ENST00000349225 COQ10AQ96MF6 247 aa13.53□□□□□ -0.24
RLIM-202ENST00000349225 SGIP1Q9BQI5 828 aa13.53□□□□□ -0.24
RLIM-202ENST00000349225 CINPQ9BW66 212 aaPredicted RBP13.53□□□□□ -0.24
RLIM-202ENST00000349225 C11orf49Q9H6J7 331 aa13.53□□□□□ -0.24
RLIM-202ENST00000349225 C1GALT1Q9NS00 363 aa13.53□□□□□ -0.24
RLIM-202ENST00000349225 IMP3Q9NV31 184 aaKnown RBP13.53□□□□□ -0.24
RLIM-202ENST00000349225 NLGN3Q9NZ94 848 aa13.53□□□□□ -0.24
RLIM-202ENST00000349225 SLC22A14Q9Y267 594 aa13.53□□□□□ -0.24
RLIM-202ENST00000349225 MAB21L2Q9Y586 359 aa13.53□□□□□ -0.24
RLIM-202ENST00000349225 PCDHB1Q9Y5F3 818 aa13.53□□□□□ -0.24
RLIM-202ENST00000349225 PLXNA3P51805 1871 aa13.53□□□□□ -0.24
RLIM-202ENST00000349225 MEIKINA0A087WXM9 373 aa13.52□□□□□ -0.24
RLIM-202ENST00000349225 ARL5CA6NH57 179 aa13.52□□□□□ -0.24
RLIM-202ENST00000349225 OR56A5P0C7T3 313 aa13.52□□□□□ -0.24
RLIM-202ENST00000349225 ITPKAP23677 461 aa13.52□□□□□ -0.24
RLIM-202ENST00000349225 DGKAP23743 735 aa13.52□□□□□ -0.24
RLIM-202ENST00000349225 GABRA5P31644 462 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms