RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 INSL4Q14641 139 aa16.94■□□□□ 0.3
APP-202ENST00000348990 PXDC1Q5TGL8 231 aa16.94■□□□□ 0.3
APP-202ENST00000348990 GRHL2Q6ISB3 625 aa16.94■□□□□ 0.3
APP-202ENST00000348990 ANGPTL6Q8NI99 470 aa16.94■□□□□ 0.3
APP-202ENST00000348990 TMEM19Q96HH6 336 aa16.94■□□□□ 0.3
APP-202ENST00000348990 TEFMQ96QE5 360 aaKnown RBP16.94■□□□□ 0.3
APP-202ENST00000348990 GDF15Q99988 308 aa16.94■□□□□ 0.3
APP-202ENST00000348990 NIPAL2Q9H841 368 aa16.94■□□□□ 0.3
APP-202ENST00000348990 B4GALT6Q9UBX8 382 aa16.94■□□□□ 0.3
APP-202ENST00000348990 H7C4K7 107 aa16.93■□□□□ 0.3
APP-202ENST00000348990 CCT3P49368 545 aaKnown RBP16.93■□□□□ 0.3
APP-202ENST00000348990 WDR5P61964 334 aaKnown RBP16.93■□□□□ 0.3
APP-202ENST00000348990 ILKQ13418 452 aa16.93■□□□□ 0.3
APP-202ENST00000348990 IDNKQ5T6J7 187 aa16.93■□□□□ 0.3
APP-202ENST00000348990 C16orf62Q7Z3J2 963 aa16.93■□□□□ 0.3
APP-202ENST00000348990 IQCHQ86VS3 1027 aa16.93■□□□□ 0.3
APP-202ENST00000348990 FAM20CQ8IXL6 584 aa16.93■□□□□ 0.3
APP-202ENST00000348990 OR2AP1Q8NGE2 309 aa16.93■□□□□ 0.3
APP-202ENST00000348990 MGAT4AQ9UM21 535 aa16.93■□□□□ 0.3
APP-202ENST00000348990 MRPS7Q9Y2R9 242 aaKnown RBP16.93■□□□□ 0.3
APP-202ENST00000348990 SLC45A1Q9Y2W3 748 aa16.93■□□□□ 0.3
APP-202ENST00000348990 NLRC5Q86WI3 1866 aa16.93■□□□□ 0.3
APP-202ENST00000348990 PATJQ8NI35 1801 aa16.93■□□□□ 0.3
APP-202ENST00000348990 SGTAO43765 313 aa16.93■□□□□ 0.3
APP-202ENST00000348990 GPR37L1O60883 481 aa16.93■□□□□ 0.3
APP-202ENST00000348990 EOMESO95936 686 aa16.93■□□□□ 0.3
APP-202ENST00000348990 CTSOP43234 321 aaPredicted RBP16.93■□□□□ 0.3
APP-202ENST00000348990 PRKAG1P54619 331 aa16.93■□□□□ 0.3
APP-202ENST00000348990 SNRPGP62308 76 aaKnown RBP16.93■□□□□ 0.3
APP-202ENST00000348990 MLLT1Q03111 559 aaPredicted RBP16.93■□□□□ 0.3
APP-202ENST00000348990 POU4F3Q15319 338 aa16.93■□□□□ 0.3
APP-202ENST00000348990 HIST2H2AA3Q6FI13 130 aa16.93■□□□□ 0.3
APP-202ENST00000348990 ZNF730Q6ZMV8 503 aa16.93■□□□□ 0.3
APP-202ENST00000348990 Q6ZVL8 140 aa16.93■□□□□ 0.3
APP-202ENST00000348990 C11orf96Q7Z7L8 435 aa16.93■□□□□ 0.3
APP-202ENST00000348990 OR4M1Q8NGD0 313 aa16.93■□□□□ 0.3
APP-202ENST00000348990 NEIL3Q8TAT5 605 aa16.93■□□□□ 0.3
APP-202ENST00000348990 CHTF18Q8WVB6 975 aa16.93■□□□□ 0.3
APP-202ENST00000348990 RNFT2Q96EX2 444 aa16.93■□□□□ 0.3
APP-202ENST00000348990 SLC6A18Q96N87 628 aa16.93■□□□□ 0.3
APP-202ENST00000348990 RC3H2Q9HBD1 1191 aaKnown RBP16.93■□□□□ 0.3
APP-202ENST00000348990 CLEC4EQ9ULY5 219 aa16.93■□□□□ 0.3
APP-202ENST00000348990 DYRK1BQ9Y463 629 aa16.93■□□□□ 0.3
APP-202ENST00000348990 CHD5Q8TDI0 1954 aa16.93■□□□□ 0.3
APP-202ENST00000348990 M0R3H8 397 aa16.92■□□□□ 0.3
APP-202ENST00000348990 TEX28O15482 410 aa16.92■□□□□ 0.3
APP-202ENST00000348990 ARAFP10398 606 aa16.92■□□□□ 0.3
APP-202ENST00000348990 ITGB7P26010 798 aa16.92■□□□□ 0.3
APP-202ENST00000348990 ELAVL4P26378 380 aaKnown RBP16.92■□□□□ 0.3
APP-202ENST00000348990 LSM11P83369 360 aaKnown RBP eCLIP16.92■□□□□ 0.39e-8■□□□□ 8.2
APP-202ENST00000348990 FABP5Q01469 135 aa16.92■□□□□ 0.3
APP-202ENST00000348990 TXNDC8Q6A555 127 aa16.92■□□□□ 0.3
APP-202ENST00000348990 CREB3L2Q70SY1 520 aa16.92■□□□□ 0.3
APP-202ENST00000348990 RRM2BQ7LG56 351 aa16.92■□□□□ 0.3
APP-202ENST00000348990 SLC30A8Q8IWU4 369 aa16.92■□□□□ 0.3
APP-202ENST00000348990 C16orf78Q8WTQ4 265 aa16.92■□□□□ 0.3
APP-202ENST00000348990 MRPS31Q92665 395 aaKnown RBP16.92■□□□□ 0.3
APP-202ENST00000348990 NACC2Q96BF6 587 aa16.92■□□□□ 0.3
APP-202ENST00000348990 ARPC5LQ9BPX5 153 aa16.92■□□□□ 0.3
APP-202ENST00000348990 SUV39H2Q9H5I1 410 aa16.92■□□□□ 0.3
APP-202ENST00000348990 B3GAT2Q9NPZ5 323 aa16.92■□□□□ 0.3
APP-202ENST00000348990 EXO1Q9UQ84 846 aaKnown RBP16.92■□□□□ 0.3
APP-202ENST00000348990 NCKAP1Q9Y2A7 1128 aa16.92■□□□□ 0.3
APP-202ENST00000348990 LOC105371267A0A1B0GV96 52 aa16.92■□□□□ 0.3
APP-202ENST00000348990 GFYI3L273 518 aa16.92■□□□□ 0.3
APP-202ENST00000348990 TSPAN6O43657 245 aa16.92■□□□□ 0.3
APP-202ENST00000348990 HCN1O60741 890 aa16.92■□□□□ 0.3
APP-202ENST00000348990 SNRPD1P62314 119 aaKnown RBP16.92■□□□□ 0.3
APP-202ENST00000348990 TOR2AQ5JU69 321 aa16.92■□□□□ 0.3
APP-202ENST00000348990 KIAA1161Q6NSJ0 714 aa16.92■□□□□ 0.3
APP-202ENST00000348990 ACSM5Q6NUN0 579 aa16.92■□□□□ 0.3
APP-202ENST00000348990 UNC5DQ6UXZ4 953 aa16.92■□□□□ 0.3
APP-202ENST00000348990 SLC7A13Q8TCU3 470 aa16.92■□□□□ 0.3
APP-202ENST00000348990 ZSCAN5AQ9BUG6 496 aa16.92■□□□□ 0.3
APP-202ENST00000348990 MVB12BQ9H7P6 319 aa16.92■□□□□ 0.3
APP-202ENST00000348990 CKMP06732 381 aa16.92■□□□□ 0.3
APP-202ENST00000348990 ATF4P18848 351 aaPredicted RBP16.92■□□□□ 0.3
APP-202ENST00000348990 PTNP21246 168 aa16.92■□□□□ 0.3
APP-202ENST00000348990 SOX18P35713 384 aa16.92■□□□□ 0.3
APP-202ENST00000348990 MAP4K2Q12851 820 aa16.92■□□□□ 0.3
APP-202ENST00000348990 CNTN1Q12860 1018 aa16.92■□□□□ 0.3
APP-202ENST00000348990 FCN2Q15485 313 aa16.92■□□□□ 0.3
APP-202ENST00000348990 PLEKHS1Q5SXH7 462 aa16.92■□□□□ 0.3
APP-202ENST00000348990 TCTN3Q6NUS6 607 aa16.92■□□□□ 0.3
APP-202ENST00000348990 CBARPQ8N350 705 aaPredicted RBP16.92■□□□□ 0.3
APP-202ENST00000348990 HORMAD2Q8N7B1 307 aa16.92■□□□□ 0.3
APP-202ENST00000348990 SLC38A5Q8WUX1 472 aa16.92■□□□□ 0.3
APP-202ENST00000348990 SCRN2Q96FV2 425 aa16.92■□□□□ 0.3
APP-202ENST00000348990 MSLNLQ96KJ4 702 aa16.92■□□□□ 0.3
APP-202ENST00000348990 HYLS1Q96M11 299 aa16.92■□□□□ 0.3
APP-202ENST00000348990 SLC6A16Q9GZN6 736 aa16.92■□□□□ 0.3
APP-202ENST00000348990 BEX1Q9HBH7 125 aa16.92■□□□□ 0.3
APP-202ENST00000348990 PAK6Q9NQU5 681 aaPredicted RBP16.92■□□□□ 0.3
APP-202ENST00000348990 PTGFRNQ9P2B2 879 aa16.92■□□□□ 0.3
APP-202ENST00000348990 EXTL2Q9UBQ6 330 aa16.92■□□□□ 0.3
APP-202ENST00000348990 KCNN3Q9UGI6 736 aa16.92■□□□□ 0.3
APP-202ENST00000348990 RTCAO00442 366 aaKnown RBP16.91■□□□□ 0.3
APP-202ENST00000348990 PRRG1O14668 218 aa16.91■□□□□ 0.3
APP-202ENST00000348990 MPC1LP0DKB6 136 aa16.91■□□□□ 0.3
APP-202ENST00000348990 MAPK8P45983 427 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms