RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 SPSB2Q99619 263 aa25.38■■□□□ 1.65
SSBP4-202ENST00000348495 SLC39A3Q9BRY0 314 aa25.38■■□□□ 1.65
SSBP4-202ENST00000348495 VN1R1Q9GZP7 353 aa25.38■■□□□ 1.65
SSBP4-202ENST00000348495 NEUROD4Q9HD90 331 aa25.38■■□□□ 1.65
SSBP4-202ENST00000348495 SIRT3Q9NTG7 399 aaPredicted RBP25.38■■□□□ 1.65
SSBP4-202ENST00000348495 VAPAQ9P0L0 249 aa25.38■■□□□ 1.65
SSBP4-202ENST00000348495 PADI1Q9ULC6 663 aa25.38■■□□□ 1.65
SSBP4-202ENST00000348495 PCDHGB4Q9UN71 923 aa25.38■■□□□ 1.65
SSBP4-202ENST00000348495 PCDHB14Q9Y5E9 798 aa25.38■■□□□ 1.65
SSBP4-202ENST00000348495 CDRT15L2A8MXV6 281 aa25.37■■□□□ 1.65
SSBP4-202ENST00000348495 MXRA7P84157 204 aa25.37■■□□□ 1.65
SSBP4-202ENST00000348495 HSPB3Q12988 150 aa25.37■■□□□ 1.65
SSBP4-202ENST00000348495 GTDC1Q4AE62 458 aa25.37■■□□□ 1.65
SSBP4-202ENST00000348495 MLIPQ5VWP3 458 aa25.37■■□□□ 1.65
SSBP4-202ENST00000348495 TMEM151BQ8IW70 566 aa25.37■■□□□ 1.65
SSBP4-202ENST00000348495 PTCHD1Q96NR3 888 aa25.37■■□□□ 1.65
SSBP4-202ENST00000348495 CGREF1Q99674 301 aa25.37■■□□□ 1.65
SSBP4-202ENST00000348495 LRMDAQ9H2I8 198 aa25.37■■□□□ 1.65
SSBP4-202ENST00000348495 SDAD1Q9NVU7 687 aaKnown RBP eCLIP25.37■■□□□ 1.658e-10■■■■■ 54.2
SSBP4-202ENST00000348495 NUP214P35658 2090 aaPredicted RBP25.37■■□□□ 1.65
SSBP4-202ENST00000348495 GSNP06396 782 aa25.37■■□□□ 1.65
SSBP4-202ENST00000348495 SLC5A2P31639 672 aa25.37■■□□□ 1.65
SSBP4-202ENST00000348495 CDK9P50750 372 aaKnown RBP25.37■■□□□ 1.65
SSBP4-202ENST00000348495 FOXL2P58012 376 aa25.37■■□□□ 1.65
SSBP4-202ENST00000348495 STX4Q12846 297 aa25.37■■□□□ 1.65
SSBP4-202ENST00000348495 CAPRIN1Q14444 709 aaKnown RBP25.37■■□□□ 1.65
SSBP4-202ENST00000348495 ASRGL1Q7L266 308 aa25.37■■□□□ 1.65
SSBP4-202ENST00000348495 PRSS58Q8IYP2 241 aa25.37■■□□□ 1.65
SSBP4-202ENST00000348495 PGAM4Q8N0Y7 254 aa25.37■■□□□ 1.65
SSBP4-202ENST00000348495 PLPP5Q8NEB5 264 aa25.37■■□□□ 1.65
SSBP4-202ENST00000348495 BTBD10Q9BSF8 475 aa25.37■■□□□ 1.65
SSBP4-202ENST00000348495 ALOXE3Q9BYJ1 711 aa25.37■■□□□ 1.65
SSBP4-202ENST00000348495 NRSN2Q9GZP1 204 aa25.37■■□□□ 1.65
SSBP4-202ENST00000348495 CXorf36Q9H7Y0 433 aa25.37■■□□□ 1.65
SSBP4-202ENST00000348495 ASCL3Q9NQ33 180 aa25.37■■□□□ 1.65
SSBP4-202ENST00000348495 NDE1Q9NXR1 346 aa25.37■■□□□ 1.65
SSBP4-202ENST00000348495 CROTQ9UKG9 612 aa25.37■■□□□ 1.65
SSBP4-202ENST00000348495 MKL2Q9ULH7 1088 aa25.37■■□□□ 1.65
SSBP4-202ENST00000348495 C9J4A7 227 aa25.36■■□□□ 1.65
SSBP4-202ENST00000348495 CCNYL3P0C7X3 344 aa25.36■■□□□ 1.65
SSBP4-202ENST00000348495 BIKQ13323 160 aa25.36■■□□□ 1.65
SSBP4-202ENST00000348495 GAB1Q13480 694 aa25.36■■□□□ 1.65
SSBP4-202ENST00000348495 SERTAD2Q14140 314 aa25.36■■□□□ 1.65
SSBP4-202ENST00000348495 NCF4Q15080 339 aa25.36■■□□□ 1.65
SSBP4-202ENST00000348495 ST13P4Q8IZP2 240 aaPredicted RBP25.36■■□□□ 1.65
SSBP4-202ENST00000348495 OR9A2Q8NGT5 310 aa25.36■■□□□ 1.65
SSBP4-202ENST00000348495 TSLPQ969D9 159 aa25.36■■□□□ 1.65
SSBP4-202ENST00000348495 HOPXQ9BPY8 73 aaPredicted RBP25.36■■□□□ 1.65
SSBP4-202ENST00000348495 NXT1Q9UKK6 140 aaKnown RBP25.36■■□□□ 1.65
SSBP4-202ENST00000348495 MYOCOSA0A1B0GUC4 107 aa25.35■■□□□ 1.65
SSBP4-202ENST00000348495 DXOO77932 396 aaKnown RBP25.35■■□□□ 1.65
SSBP4-202ENST00000348495 ABCB1P08183 1280 aaPredicted RBP25.35■■□□□ 1.65
SSBP4-202ENST00000348495 RBMS1P29558 406 aaKnown RBP25.35■■□□□ 1.65
SSBP4-202ENST00000348495 PTGER1P34995 402 aa25.35■■□□□ 1.65
SSBP4-202ENST00000348495 SOX18P35713 384 aa25.35■■□□□ 1.65
SSBP4-202ENST00000348495 MFSD4BQ5TF39 518 aa25.35■■□□□ 1.65
SSBP4-202ENST00000348495 C16orf89Q6UX73 402 aa25.35■■□□□ 1.65
SSBP4-202ENST00000348495 SHISA6Q6ZSJ9 500 aa25.35■■□□□ 1.65
SSBP4-202ENST00000348495 ESX1Q8N693 406 aa25.35■■□□□ 1.65
SSBP4-202ENST00000348495 SOX17Q9H6I2 414 aaPredicted RBP25.35■■□□□ 1.65
SSBP4-202ENST00000348495 GPN3Q9UHW5 284 aaPredicted RBP25.35■■□□□ 1.65
SSBP4-202ENST00000348495 VPS4AQ9UN37 437 aa25.35■■□□□ 1.65
SSBP4-202ENST00000348495 GMEB1Q9Y692 573 aa25.35■■□□□ 1.65
SSBP4-202ENST00000348495 WDFY3Q8IZQ1 3526 aa25.35■■□□□ 1.65
SSBP4-202ENST00000348495 TCRBV16S1A1N1A0A5B0 115 aa25.34■■□□□ 1.65
SSBP4-202ENST00000348495 IQCJ-SCHIP1C9J366 451 aaPredicted RBP25.34■■□□□ 1.65
SSBP4-202ENST00000348495 SLC6A2P23975 617 aa25.34■■□□□ 1.65
SSBP4-202ENST00000348495 PSME3P61289 254 aa25.34■■□□□ 1.65
SSBP4-202ENST00000348495 LTB4RQ15722 352 aa25.34■■□□□ 1.65
SSBP4-202ENST00000348495 ZNF621Q6ZSS3 439 aa25.34■■□□□ 1.65
SSBP4-202ENST00000348495 C7orf57Q8NEG2 295 aa25.34■■□□□ 1.65
SSBP4-202ENST00000348495 ANKRD27Q96NW4 1050 aa25.34■■□□□ 1.65
SSBP4-202ENST00000348495 IDSB3KWA1 339 aa25.34■■□□□ 1.65
SSBP4-202ENST00000348495 GYG2O15488 501 aa25.34■■□□□ 1.65
SSBP4-202ENST00000348495 KLF7O75840 302 aaPredicted RBP25.34■■□□□ 1.65
SSBP4-202ENST00000348495 ANP32DO95626 131 aa25.34■■□□□ 1.65
SSBP4-202ENST00000348495 CYC1P08574 325 aa25.34■■□□□ 1.65
SSBP4-202ENST00000348495 CD82P27701 267 aa25.34■■□□□ 1.65
SSBP4-202ENST00000348495 STT3AP46977 705 aa25.34■■□□□ 1.65
SSBP4-202ENST00000348495 RUNDC3AQ59EK9 446 aa25.34■■□□□ 1.65
SSBP4-202ENST00000348495 ZNF628Q5EBL2 1059 aa25.34■■□□□ 1.65
SSBP4-202ENST00000348495 NANOGP8Q6NSW7 305 aa25.34■■□□□ 1.65
SSBP4-202ENST00000348495 DGAT2L6Q6ZPD8 337 aa25.34■■□□□ 1.65
SSBP4-202ENST00000348495 ZNF771Q7L3S4 317 aaPredicted RBP25.34■■□□□ 1.65
SSBP4-202ENST00000348495 DEFB107AQ8IZN7 70 aa25.34■■□□□ 1.65
SSBP4-202ENST00000348495 ZNF675Q8TD23 568 aa25.34■■□□□ 1.65
SSBP4-202ENST00000348495 PPWD1Q96BP3 646 aaKnown RBP25.34■■□□□ 1.65
SSBP4-202ENST00000348495 NANOGQ9H9S0 305 aa25.34■■□□□ 1.65
SSBP4-202ENST00000348495 MGAT2Q10469 447 aa25.33■■□□□ 1.65
SSBP4-202ENST00000348495 RTP5Q14D33 572 aa25.33■■□□□ 1.65
SSBP4-202ENST00000348495 PRICKLE4Q2TBC4 344 aa25.33■■□□□ 1.65
SSBP4-202ENST00000348495 DNAL1Q4LDG9 190 aa25.33■■□□□ 1.65
SSBP4-202ENST00000348495 NLGN4XQ8N0W4 816 aa25.33■■□□□ 1.65
SSBP4-202ENST00000348495 TRIML2Q8N7C3 387 aa25.33■■□□□ 1.65
SSBP4-202ENST00000348495 ADCY4Q8NFM4 1077 aa25.33■■□□□ 1.65
SSBP4-202ENST00000348495 NLGN4YQ8NFZ3 816 aaPredicted RBP25.33■■□□□ 1.65
SSBP4-202ENST00000348495 ELP4Q96EB1 424 aa25.33■■□□□ 1.65
SSBP4-202ENST00000348495 AURKBQ96GD4 344 aaPredicted RBP25.33■■□□□ 1.65
SSBP4-202ENST00000348495 SEMA3GQ9NS98 782 aa25.33■■□□□ 1.65
SSBP4-202ENST00000348495 ACSL6Q9UKU0 697 aa25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms