RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 LTBP3Q9NS15 1303 aa14.59□□□□□ -0.07
LMNA-201ENST00000347559 TRIP12Q14669 1992 aaPredicted RBP14.59□□□□□ -0.07
LMNA-201ENST00000347559 C6orf47O95873 294 aa14.59□□□□□ -0.07
LMNA-201ENST00000347559 HIST1H2AGP0C0S8 130 aaPredicted RBP14.59□□□□□ -0.07
LMNA-201ENST00000347559 HIST1H2ADP20671 130 aa14.59□□□□□ -0.07
LMNA-201ENST00000347559 TPMTP51580 245 aa14.59□□□□□ -0.07
LMNA-201ENST00000347559 DSTNP60981 165 aa14.59□□□□□ -0.07
LMNA-201ENST00000347559 BTG1P62324 171 aa14.59□□□□□ -0.07
LMNA-201ENST00000347559 GPRC6AQ5T6X5 926 aa14.59□□□□□ -0.07
LMNA-201ENST00000347559 DEF8Q6ZN54 512 aa14.59□□□□□ -0.07
LMNA-201ENST00000347559 TMEM91Q6ZNR0 172 aa14.59□□□□□ -0.07
LMNA-201ENST00000347559 QSOX2Q6ZRP7 698 aa14.59□□□□□ -0.07
LMNA-201ENST00000347559 HIST1H2AHQ96KK5 128 aa14.59□□□□□ -0.07
LMNA-201ENST00000347559 ZNF578Q96N58 590 aaPredicted RBP14.59□□□□□ -0.07
LMNA-201ENST00000347559 HIST1H2AJQ99878 128 aa14.59□□□□□ -0.07
LMNA-201ENST00000347559 H2AFJQ9BTM1 129 aa14.59□□□□□ -0.07
LMNA-201ENST00000347559 SORBS1Q9BX66 1292 aaKnown RBP14.59□□□□□ -0.07
LMNA-201ENST00000347559 SDHAF2Q9NX18 166 aa14.59□□□□□ -0.07
LMNA-201ENST00000347559 TNFRSF10DQ9UBN6 386 aa14.59□□□□□ -0.07
LMNA-201ENST00000347559 REV1Q9UBZ9 1251 aa14.59□□□□□ -0.07
LMNA-201ENST00000347559 HRH3Q9Y5N1 445 aa14.59□□□□□ -0.07
LMNA-201ENST00000347559 ZFP37Q9Y6Q3 630 aaPredicted RBP14.59□□□□□ -0.07
LMNA-201ENST00000347559 SNAI1O95863 264 aaPredicted RBP14.59□□□□□ -0.07
LMNA-201ENST00000347559 CELP19835 753 aa14.59□□□□□ -0.07
LMNA-201ENST00000347559 EIF2B5Q13144 721 aaKnown RBP14.59□□□□□ -0.07
LMNA-201ENST00000347559 SHEQ5VZ18 495 aa14.59□□□□□ -0.07
LMNA-201ENST00000347559 FAM180BQ6P0A1 224 aa14.59□□□□□ -0.07
LMNA-201ENST00000347559 METTL2BQ6P1Q9 378 aaKnown RBP14.59□□□□□ -0.07
LMNA-201ENST00000347559 CERS6Q6ZMG9 384 aa14.59□□□□□ -0.07
LMNA-201ENST00000347559 LINC00518Q8N0U6 118 aa14.59□□□□□ -0.07
LMNA-201ENST00000347559 TTC9BQ8N6N2 239 aa14.59□□□□□ -0.07
LMNA-201ENST00000347559 OR2T35Q8NGX2 323 aa14.59□□□□□ -0.07
LMNA-201ENST00000347559 NPLOC4Q8TAT6 608 aa14.59□□□□□ -0.07
LMNA-201ENST00000347559 FBXO32Q969P5 355 aa14.59□□□□□ -0.07
LMNA-201ENST00000347559 RFT1Q96AA3 541 aa14.59□□□□□ -0.07
LMNA-201ENST00000347559 P2RY13Q9BPV8 354 aa14.59□□□□□ -0.07
LMNA-201ENST00000347559 MED18Q9BUE0 208 aa14.59□□□□□ -0.07
LMNA-201ENST00000347559 CHIAQ9BZP6 476 aa14.59□□□□□ -0.07
LMNA-201ENST00000347559 GHITMQ9H3K2 345 aa14.59□□□□□ -0.07
LMNA-201ENST00000347559 CLEC4AQ9UMR7 237 aa14.59□□□□□ -0.07
LMNA-201ENST00000347559 CLCA2Q9UQC9 943 aa14.59□□□□□ -0.07
LMNA-201ENST00000347559 FFAR1O14842 300 aa14.58□□□□□ -0.08
LMNA-201ENST00000347559 KHNYNO15037 678 aaKnown RBP14.58□□□□□ -0.08
LMNA-201ENST00000347559 RHCEP18577 417 aa14.58□□□□□ -0.08
LMNA-201ENST00000347559 ATF6P18850 670 aa14.58□□□□□ -0.08
LMNA-201ENST00000347559 HK1P19367 917 aa14.58□□□□□ -0.08
LMNA-201ENST00000347559 LIMS1P48059 325 aa14.58□□□□□ -0.08
LMNA-201ENST00000347559 CRYBB1P53674 252 aaPredicted RBP14.58□□□□□ -0.08
LMNA-201ENST00000347559 LIM2P55344 173 aa14.58□□□□□ -0.08
LMNA-201ENST00000347559 PLA1AQ53H76 456 aa14.58□□□□□ -0.08
LMNA-201ENST00000347559 ARMC12Q5T9G4 340 aa14.58□□□□□ -0.08
LMNA-201ENST00000347559 ALG1LQ6GMV1 187 aa14.58□□□□□ -0.08
LMNA-201ENST00000347559 MEX3DQ86XN8 651 aaKnown RBP14.58□□□□□ -0.08
LMNA-201ENST00000347559 LSM14AQ8ND56 463 aaKnown RBP14.58□□□□□ -0.08
LMNA-201ENST00000347559 TTLQ8NG68 377 aa14.58□□□□□ -0.08
LMNA-201ENST00000347559 SMAD5Q99717 465 aaKnown RBP14.58□□□□□ -0.08
LMNA-201ENST00000347559 WASH6PQ9NQA3 447 aa14.58□□□□□ -0.08
LMNA-201ENST00000347559 NKIRAS2Q9NYR9 191 aa14.58□□□□□ -0.08
LMNA-201ENST00000347559 KCMF1Q9P0J7 381 aa14.58□□□□□ -0.08
LMNA-201ENST00000347559 SRRDQ9UH36 339 aa14.58□□□□□ -0.08
LMNA-201ENST00000347559 BAIAP2Q9UQB8 552 aa14.58□□□□□ -0.08
LMNA-201ENST00000347559 GPR52Q9Y2T5 361 aa14.58□□□□□ -0.08
LMNA-201ENST00000347559 FKBP7Q9Y680 259 aa14.58□□□□□ -0.08
LMNA-201ENST00000347559 PAPPA2Q9BXP8 1791 aa14.58□□□□□ -0.08
LMNA-201ENST00000347559 hCG_1807616A0A1W2PRN6 198 aa14.58□□□□□ -0.08
LMNA-201ENST00000347559 RGS11O94810 467 aa14.58□□□□□ -0.08
LMNA-201ENST00000347559 AKR1D1P51857 326 aa14.58□□□□□ -0.08
LMNA-201ENST00000347559 ZNF273Q14593 569 aa14.58□□□□□ -0.08
LMNA-201ENST00000347559 XKR6Q5GH73 641 aa14.58□□□□□ -0.08
LMNA-201ENST00000347559 RPS26P11Q5JNZ5 115 aaPredicted RBP14.58□□□□□ -0.08
LMNA-201ENST00000347559 DCST1Q5T197 706 aa14.58□□□□□ -0.08
LMNA-201ENST00000347559 METAP1DQ6UB28 335 aaPredicted RBP14.58□□□□□ -0.08
LMNA-201ENST00000347559 C16orf59Q7L2K0 433 aa14.58□□□□□ -0.08
LMNA-201ENST00000347559 C12orf66Q96MD2 445 aa14.58□□□□□ -0.08
LMNA-201ENST00000347559 TMEM175Q9BSA9 504 aa14.58□□□□□ -0.08
LMNA-201ENST00000347559 SPRTNQ9H040 489 aaPredicted RBP14.58□□□□□ -0.08
LMNA-201ENST00000347559 PHF11Q9UIL8 331 aa14.58□□□□□ -0.08
LMNA-201ENST00000347559 PLATP00750 562 aa14.57□□□□□ -0.08
LMNA-201ENST00000347559 OR56A5P0C7T3 313 aa14.57□□□□□ -0.08
LMNA-201ENST00000347559 CR2P20023 1033 aa14.57□□□□□ -0.08
LMNA-201ENST00000347559 ITGALP20701 1170 aa14.57□□□□□ -0.08
LMNA-201ENST00000347559 PUS10Q3MIT2 529 aaKnown RBP14.57□□□□□ -0.08
LMNA-201ENST00000347559 SYT14P1Q58G82 188 aa14.57□□□□□ -0.08
LMNA-201ENST00000347559 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.57□□□□□ -0.08
LMNA-201ENST00000347559 SEMA3GQ9NS98 782 aa14.57□□□□□ -0.08
LMNA-201ENST00000347559 IMP3Q9NV31 184 aaKnown RBP14.57□□□□□ -0.08
LMNA-201ENST00000347559 TAS2R7Q9NYW3 318 aa14.57□□□□□ -0.08
LMNA-201ENST00000347559 CPNE7Q9UBL6 633 aa14.57□□□□□ -0.08
LMNA-201ENST00000347559 SCML2Q9UQR0 700 aa14.57□□□□□ -0.08
LMNA-201ENST00000347559 RUVBL1Q9Y265 456 aaKnown RBP14.57□□□□□ -0.08
LMNA-201ENST00000347559 SF3B6Q9Y3B4 125 aaKnown RBP14.57□□□□□ -0.08
LMNA-201ENST00000347559 DVL2O14641 736 aa14.57□□□□□ -0.08
LMNA-201ENST00000347559 ADAP00813 363 aa14.57□□□□□ -0.08
LMNA-201ENST00000347559 AOAHP28039 575 aa14.57□□□□□ -0.08
LMNA-201ENST00000347559 WDR5P61964 334 aaKnown RBP14.57□□□□□ -0.08
LMNA-201ENST00000347559 ILKQ13418 452 aa14.57□□□□□ -0.08
LMNA-201ENST00000347559 NFATC2Q13469 925 aa14.57□□□□□ -0.08
LMNA-201ENST00000347559 CAMK2DQ13557 499 aa14.57□□□□□ -0.08
LMNA-201ENST00000347559 DUSP28Q4G0W2 176 aa14.57□□□□□ -0.08
LMNA-201ENST00000347559 ZNF385BQ569K4 471 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms