RNA–Protein interactions for RNA: ENST00000347471.8

SMARCC2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 3,839 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-202ENST00000347471 FAM81AQ8TBF8 368 aa16.22■□□□□ 0.19
SMARCC2-202ENST00000347471 CLIP3Q96DZ5 547 aa16.22■□□□□ 0.19
SMARCC2-202ENST00000347471 PHOX2BQ99453 314 aa16.22■□□□□ 0.19
SMARCC2-202ENST00000347471 RHNO1Q9BSD3 238 aa16.22■□□□□ 0.19
SMARCC2-202ENST00000347471 TMEM74BQ9NUR3 256 aa16.22■□□□□ 0.19
SMARCC2-202ENST00000347471 PCDHGB3Q9Y5G1 929 aa16.22■□□□□ 0.19
SMARCC2-202ENST00000347471 MUC22E2RYF6 1773 aaPredicted RBP16.22■□□□□ 0.19
SMARCC2-202ENST00000347471 CACNA1IQ9P0X4 2223 aa16.22■□□□□ 0.19
SMARCC2-202ENST00000347471 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.22■□□□□ 0.19
SMARCC2-202ENST00000347471 SMIM31A0A1B0GVY4 71 aa16.22■□□□□ 0.19
SMARCC2-202ENST00000347471 SGK494L7N484 410 aa16.22■□□□□ 0.19
SMARCC2-202ENST00000347471 OR10H3O60404 316 aa16.22■□□□□ 0.19
SMARCC2-202ENST00000347471 ARAFP10398 606 aa16.22■□□□□ 0.19
SMARCC2-202ENST00000347471 NT5EP21589 574 aa16.22■□□□□ 0.19
SMARCC2-202ENST00000347471 MPIP34949 423 aa16.22■□□□□ 0.19
SMARCC2-202ENST00000347471 MFSD9Q8NBP5 474 aa16.22■□□□□ 0.19
SMARCC2-202ENST00000347471 SLC38A3Q99624 504 aa16.22■□□□□ 0.19
SMARCC2-202ENST00000347471 SYNDIG1Q9H7V2 258 aa16.22■□□□□ 0.19
SMARCC2-202ENST00000347471 SHISA7A6NL88 538 aa16.21■□□□□ 0.19
SMARCC2-202ENST00000347471 CLCN2P51788 898 aa16.21■□□□□ 0.19
SMARCC2-202ENST00000347471 YPEL5P62699 121 aa16.21■□□□□ 0.19
SMARCC2-202ENST00000347471 HYAL2Q12891 473 aa16.21■□□□□ 0.19
SMARCC2-202ENST00000347471 CTU2Q2VPK5 515 aaKnown RBP16.21■□□□□ 0.19
SMARCC2-202ENST00000347471 TMEM236Q5W0B7 351 aa16.21■□□□□ 0.19
SMARCC2-202ENST00000347471 P3H2Q8IVL5 708 aa16.21■□□□□ 0.19
SMARCC2-202ENST00000347471 ROGDIQ9GZN7 287 aa16.21■□□□□ 0.19
SMARCC2-202ENST00000347471 TMEFF2Q9UIK5 374 aaPredicted RBP16.21■□□□□ 0.19
SMARCC2-202ENST00000347471 KCNE3Q9Y6H6 103 aa16.21■□□□□ 0.19
SMARCC2-202ENST00000347471 SPTY2D1-AS1A0A0U1RR47 76 aa16.21■□□□□ 0.19
SMARCC2-202ENST00000347471 C2orf74A8MZ97 194 aa16.21■□□□□ 0.19
SMARCC2-202ENST00000347471 H3BN98 237 aa16.21■□□□□ 0.19
SMARCC2-202ENST00000347471 MAN2B1O00754 1011 aa16.21■□□□□ 0.19
SMARCC2-202ENST00000347471 HCRTR1O43613 425 aa16.21■□□□□ 0.19
SMARCC2-202ENST00000347471 B3GALT2O43825 422 aa16.21■□□□□ 0.19
SMARCC2-202ENST00000347471 SERPINB1P30740 379 aa16.21■□□□□ 0.19
SMARCC2-202ENST00000347471 RPS15AP62244 130 aaKnown RBP16.21■□□□□ 0.19
SMARCC2-202ENST00000347471 HPCAP84074 193 aa16.21■□□□□ 0.19
SMARCC2-202ENST00000347471 ZFYVE21Q9BQ24 234 aa16.21■□□□□ 0.19
SMARCC2-202ENST00000347471 TREX2Q9BQ50 279 aaPredicted RBP16.21■□□□□ 0.19
SMARCC2-202ENST00000347471 SIRT3Q9NTG7 399 aaPredicted RBP16.21■□□□□ 0.19
SMARCC2-202ENST00000347471 UNC13CQ8NB66 2214 aa16.21■□□□□ 0.19
SMARCC2-202ENST00000347471 HMGN4O00479 90 aa16.21■□□□□ 0.18
SMARCC2-202ENST00000347471 FESP07332 822 aa16.21■□□□□ 0.18
SMARCC2-202ENST00000347471 AHRP35869 848 aa16.21■□□□□ 0.18
SMARCC2-202ENST00000347471 SEPHS1P49903 392 aa16.21■□□□□ 0.18
SMARCC2-202ENST00000347471 C21orf58P58505 322 aa16.21■□□□□ 0.18
SMARCC2-202ENST00000347471 LSM3P62310 102 aaKnown RBP16.21■□□□□ 0.18
SMARCC2-202ENST00000347471 PIN1Q13526 163 aaPredicted RBP16.21■□□□□ 0.18
SMARCC2-202ENST00000347471 ERV3-1Q14264 604 aa16.21■□□□□ 0.18
SMARCC2-202ENST00000347471 ZNF300Q96RE9 604 aaPredicted RBP16.21■□□□□ 0.18
SMARCC2-202ENST00000347471 MKLN1Q9UL63 735 aa16.21■□□□□ 0.18
SMARCC2-202ENST00000347471 PMS2P3Q13401 168 aa16.2■□□□□ 0.18
SMARCC2-202ENST00000347471 SUZ12Q15022 739 aaKnown RBP16.2■□□□□ 0.18
SMARCC2-202ENST00000347471 TSSK4Q6SA08 328 aa16.2■□□□□ 0.18
SMARCC2-202ENST00000347471 PAQR7Q86WK9 346 aa16.2■□□□□ 0.18
SMARCC2-202ENST00000347471 CSNK1A1LQ8N752 337 aa16.2■□□□□ 0.18
SMARCC2-202ENST00000347471 NUP43Q8NFH3 380 aa16.2■□□□□ 0.18
SMARCC2-202ENST00000347471 ADAMTS15Q8TE58 950 aa16.2■□□□□ 0.18
SMARCC2-202ENST00000347471 GEMIN6Q8WXD5 167 aaKnown RBP16.2■□□□□ 0.18
SMARCC2-202ENST00000347471 C8orf4Q9NR00 106 aa16.2■□□□□ 0.18
SMARCC2-202ENST00000347471 A0A1W2PPC4 97 aa16.2■□□□□ 0.18
SMARCC2-202ENST00000347471 SLC9B1P1A6NJY1 282 aa16.2■□□□□ 0.18
SMARCC2-202ENST00000347471 ADAMDEC1O15204 470 aa16.2■□□□□ 0.18
SMARCC2-202ENST00000347471 NOL3O60936 208 aaKnown RBP16.2■□□□□ 0.18
SMARCC2-202ENST00000347471 FAM20BO75063 409 aa16.2■□□□□ 0.18
SMARCC2-202ENST00000347471 ST6GAL1P15907 406 aa16.2■□□□□ 0.18
SMARCC2-202ENST00000347471 TLX1P31314 330 aaPredicted RBP16.2■□□□□ 0.18
SMARCC2-202ENST00000347471 AVPR1BP47901 424 aa16.2■□□□□ 0.18
SMARCC2-202ENST00000347471 LEXMQ3ZCV2 418 aa16.2■□□□□ 0.18
SMARCC2-202ENST00000347471 CCNJQ5T5M9 372 aa16.2■□□□□ 0.18
SMARCC2-202ENST00000347471 ZC3H14Q6PJT7 736 aaKnown RBP16.2■□□□□ 0.18
SMARCC2-202ENST00000347471 ZNF540Q8NDQ6 660 aa16.2■□□□□ 0.18
SMARCC2-202ENST00000347471 NCSTNQ92542 709 aa16.2■□□□□ 0.18
SMARCC2-202ENST00000347471 NEURL3Q96EH8 262 aa16.2■□□□□ 0.18
SMARCC2-202ENST00000347471 C7orf34Q96L11 122 aa16.2■□□□□ 0.18
SMARCC2-202ENST00000347471 EVA1BQ9NVM1 165 aa16.2■□□□□ 0.18
SMARCC2-202ENST00000347471 IMPAD1Q9NX62 359 aa16.2■□□□□ 0.18
SMARCC2-202ENST00000347471 P2RX2Q9UBL9 471 aa16.2■□□□□ 0.18
SMARCC2-202ENST00000347471 ZNF639Q9UID6 485 aa16.2■□□□□ 0.18
SMARCC2-202ENST00000347471 ASB4Q9Y574 426 aa16.2■□□□□ 0.18
SMARCC2-202ENST00000347471 MDC1Q14676 2089 aaKnown RBP16.2■□□□□ 0.18
SMARCC2-202ENST00000347471 KRBA1A5PL33 1030 aa16.2■□□□□ 0.18
SMARCC2-202ENST00000347471 PRICKLE3O43900 615 aaPredicted RBP16.2■□□□□ 0.18
SMARCC2-202ENST00000347471 DRD2P14416 443 aa16.2■□□□□ 0.18
SMARCC2-202ENST00000347471 ITGA1P56199 1179 aa16.2■□□□□ 0.18
SMARCC2-202ENST00000347471 APOFQ13790 326 aa16.2■□□□□ 0.18
SMARCC2-202ENST00000347471 KIR2DS3Q14952 304 aa16.2■□□□□ 0.18
SMARCC2-202ENST00000347471 C6orf141Q5SZD1 244 aa16.2■□□□□ 0.18
SMARCC2-202ENST00000347471 MFSD4BQ5TF39 518 aa16.2■□□□□ 0.18
SMARCC2-202ENST00000347471 ZNF425Q6IV72 752 aa16.2■□□□□ 0.18
SMARCC2-202ENST00000347471 AHSA2Q719I0 299 aa16.2■□□□□ 0.18
SMARCC2-202ENST00000347471 TGM7Q96PF1 710 aa16.2■□□□□ 0.18
SMARCC2-202ENST00000347471 ZNF607Q96SK3 696 aa16.2■□□□□ 0.18
SMARCC2-202ENST00000347471 NIPSNAP1Q9BPW8 284 aa16.2■□□□□ 0.18
SMARCC2-202ENST00000347471 LRRC61Q9BV99 259 aa16.2■□□□□ 0.18
SMARCC2-202ENST00000347471 NAA50Q9GZZ1 169 aaKnown RBP16.2■□□□□ 0.18
SMARCC2-202ENST00000347471 CHST8Q9H2A9 424 aa16.2■□□□□ 0.18
SMARCC2-202ENST00000347471 SERHL2Q9H4I8 314 aa16.2■□□□□ 0.18
SMARCC2-202ENST00000347471 CXorf21Q9HAI6 301 aa16.2■□□□□ 0.18
SMARCC2-202ENST00000347471 HCN3Q9P1Z3 774 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms