RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 PGAP3Q96FM1 320 aaPredicted RBP10.4□□□□□ -0.74
CLCN6-202ENST00000346436 ZNF382Q96SR6 550 aa10.4□□□□□ -0.74
CLCN6-202ENST00000346436 DCSTAMPQ9H295 470 aa10.4□□□□□ -0.74
CLCN6-202ENST00000346436 PCTPQ9UKL6 214 aa10.4□□□□□ -0.74
CLCN6-202ENST00000346436 GPC6Q9Y625 555 aaPredicted RBP10.4□□□□□ -0.74
CLCN6-202ENST00000346436 CPNE3O75131 537 aaKnown RBP10.4□□□□□ -0.75
CLCN6-202ENST00000346436 RCBTB2O95199 551 aa10.4□□□□□ -0.75
CLCN6-202ENST00000346436 PDYNP01213 254 aa10.4□□□□□ -0.75
CLCN6-202ENST00000346436 KLK1P06870 262 aa10.4□□□□□ -0.75
CLCN6-202ENST00000346436 QSOX2Q6ZRP7 698 aa10.4□□□□□ -0.75
CLCN6-202ENST00000346436 PIANPQ8IYJ0 282 aa10.4□□□□□ -0.75
CLCN6-202ENST00000346436 KLHDC9Q8NEP7 349 aa10.4□□□□□ -0.75
CLCN6-202ENST00000346436 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.4□□□□□ -0.75
CLCN6-202ENST00000346436 TP53INP1Q96A56 240 aa10.4□□□□□ -0.75
CLCN6-202ENST00000346436 HOXD1Q9GZZ0 328 aa10.4□□□□□ -0.75
CLCN6-202ENST00000346436 NAA50Q9GZZ1 169 aaKnown RBP10.4□□□□□ -0.75
CLCN6-202ENST00000346436 SNTG1Q9NSN8 517 aa10.4□□□□□ -0.75
CLCN6-202ENST00000346436 PTBP2Q9UKA9 531 aaKnown RBP10.4□□□□□ -0.75
CLCN6-202ENST00000346436 WBP11Q9Y2W2 641 aaKnown RBP10.4□□□□□ -0.75
CLCN6-202ENST00000346436 A6NLC8 198 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 HCRTR2O43614 444 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 CD1EP15812 388 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 GCH1P30793 250 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 SLC5A2P31639 672 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 IL12RB1P42701 662 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 DSC3Q14574 896 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 MOGQ16653 247 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 CHERPQ8IWX8 916 aaKnown RBP10.39□□□□□ -0.75
CLCN6-202ENST00000346436 METTL25Q8N6Q8 603 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 CHST4Q8NCG5 386 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 PROKR2Q8NFJ6 384 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 PJA1Q8NG27 643 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 PKP4Q99569 1192 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 A0A0J9YY10 115 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 KHDRBS3O75525 346 aaKnown RBP10.39□□□□□ -0.75
CLCN6-202ENST00000346436 GADD45GO95257 159 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 IL32P24001 234 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 DSTNP60981 165 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 C6orf141Q5SZD1 244 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 ALKAL1Q6UXT8 129 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 EGFL6Q8IUX8 553 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 OR4K1Q8NGD4 311 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 BORCS8Q96FH0 119 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 ZNF347Q96SE7 839 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 SLC30A3Q99726 388 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 ENY2Q9NPA8 101 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 GJD2Q9UKL4 321 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 TMEM5Q9Y2B1 443 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 SESN1Q9Y6P5 492 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 LTBP4Q8N2S1 1624 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 ARFGEF1Q9Y6D6 1849 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 RTCAO00442 366 aaKnown RBP10.39□□□□□ -0.75
CLCN6-202ENST00000346436 SEC14L5O43304 696 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 WBP4O75554 376 aaKnown RBP10.39□□□□□ -0.75
CLCN6-202ENST00000346436 BMP2P12643 396 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 FNTBP49356 437 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 OPN5Q6U736 354 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 HTR3DQ70Z44 454 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 DTWD1Q8N5C7 304 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 KAT2AQ92830 837 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 PEX13Q92968 403 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 TMEM203Q969S6 136 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 ZNF689Q96CS4 500 aaPredicted RBP10.39□□□□□ -0.75
CLCN6-202ENST00000346436 ZFYVE21Q9BQ24 234 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 UTP23Q9BRU9 249 aaKnown RBP10.39□□□□□ -0.75
CLCN6-202ENST00000346436 POLE3Q9NRF9 147 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 DHRS7Q9Y394 339 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 SOX1O00570 391 aaPredicted RBP10.39□□□□□ -0.75
CLCN6-202ENST00000346436 SCO2O43819 266 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 INMTO95050 263 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 C9P02748 559 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 C8BP07358 591 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 ZNF3P17036 446 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 MATN1P21941 496 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 CD27P26842 260 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 ZNF630Q2M218 657 aaPredicted RBP10.39□□□□□ -0.75
CLCN6-202ENST00000346436 LCN8Q6JVE9 175 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 PIWIL3Q7Z3Z3 882 aaKnown RBP10.39□□□□□ -0.75
CLCN6-202ENST00000346436 ZNF227Q86WZ6 799 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 LGI4Q8N135 537 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 SDR16C5Q8N3Y7 309 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 NUDT8Q8WV74 236 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 TRIB3Q96RU7 358 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 COQ7Q99807 217 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 YIPF4Q9BSR8 244 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 ACTRT3Q9BYD9 372 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 ANKRD60Q9BZ19 345 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 LHPPQ9H008 270 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 XKR8Q9H6D3 395 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 ATP13A2Q9NQ11 1180 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 DIABLOQ9NR28 239 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 GIN1Q9NXP7 522 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 SLCO3A1Q9UIG8 710 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 BLACEA4D250 179 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 UBFD1O14562 309 aaKnown RBP10.39□□□□□ -0.75
CLCN6-202ENST00000346436 WDPCPO95876 746 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 DBIP07108 87 aaKnown RBP10.39□□□□□ -0.75
CLCN6-202ENST00000346436 MYF6P23409 242 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 EFR3AQ14156 821 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 OLFML2AQ68BL7 652 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms