RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 CHCHD6Q9BRQ6 235 aa14.1□□□□□ -0.15
VIPAS39-202ENST00000343765 C6orf62Q9GZU0 229 aaPredicted RBP14.1□□□□□ -0.15
VIPAS39-202ENST00000343765 TRNAU1APQ9NX07 287 aaKnown RBP14.1□□□□□ -0.15
VIPAS39-202ENST00000343765 COL4A3Q01955 1670 aa14.1□□□□□ -0.15
VIPAS39-202ENST00000343765 KIF26AQ9ULI4 1882 aaPredicted RBP14.1□□□□□ -0.15
VIPAS39-202ENST00000343765 LRIT2A6NDA9 550 aa14.1□□□□□ -0.15
VIPAS39-202ENST00000343765 ZAR1LA6NP61 321 aa14.1□□□□□ -0.15
VIPAS39-202ENST00000343765 ELAVL4P26378 380 aaKnown RBP14.1□□□□□ -0.15
VIPAS39-202ENST00000343765 GRK3P35626 688 aa14.1□□□□□ -0.15
VIPAS39-202ENST00000343765 GPR19Q15760 415 aa14.1□□□□□ -0.15
VIPAS39-202ENST00000343765 DCST1Q5T197 706 aa14.1□□□□□ -0.15
VIPAS39-202ENST00000343765 OR5M11Q96RB7 305 aa14.1□□□□□ -0.15
VIPAS39-202ENST00000343765 MAPKAP1Q9BPZ7 522 aa14.1□□□□□ -0.15
VIPAS39-202ENST00000343765 RSPH9Q9H1X1 276 aaPredicted RBP14.1□□□□□ -0.15
VIPAS39-202ENST00000343765 MRPS30Q9NP92 439 aaKnown RBP14.1□□□□□ -0.15
VIPAS39-202ENST00000343765 POLE4Q9NR33 117 aa14.1□□□□□ -0.15
VIPAS39-202ENST00000343765 GDE1Q9NZC3 331 aa14.1□□□□□ -0.15
VIPAS39-202ENST00000343765 DNAJC27Q9NZQ0 273 aa14.1□□□□□ -0.15
VIPAS39-202ENST00000343765 OSGIN1Q9UJX0 560 aa14.1□□□□□ -0.15
VIPAS39-202ENST00000343765 KCND3Q9UK17 655 aa14.1□□□□□ -0.15
VIPAS39-202ENST00000343765 FBXW2Q9UKT8 454 aa14.1□□□□□ -0.15
VIPAS39-202ENST00000343765 A0A0A6YYD5 115 aa14.09□□□□□ -0.15
VIPAS39-202ENST00000343765 HAT1O14929 419 aa14.09□□□□□ -0.15
VIPAS39-202ENST00000343765 PGRMC2O15173 223 aa14.09□□□□□ -0.15
VIPAS39-202ENST00000343765 NME6O75414 186 aaPredicted RBP14.09□□□□□ -0.15
VIPAS39-202ENST00000343765 APODP05090 189 aa14.09□□□□□ -0.15
VIPAS39-202ENST00000343765 H1F0P07305 194 aaKnown RBP14.09□□□□□ -0.15
VIPAS39-202ENST00000343765 GDI1P31150 447 aa14.09□□□□□ -0.15
VIPAS39-202ENST00000343765 DNASE1L3Q13609 305 aa14.09□□□□□ -0.15
VIPAS39-202ENST00000343765 DUSP6Q16828 381 aa14.09□□□□□ -0.15
VIPAS39-202ENST00000343765 MLIPQ5VWP3 458 aa14.09□□□□□ -0.15
VIPAS39-202ENST00000343765 KIAA1211LQ6NV74 962 aa14.09□□□□□ -0.15
VIPAS39-202ENST00000343765 SLC46A3Q7Z3Q1 461 aa14.09□□□□□ -0.15
VIPAS39-202ENST00000343765 BCDIN3DQ7Z5W3 292 aaKnown RBP14.09□□□□□ -0.15
VIPAS39-202ENST00000343765 FBXL6Q8N531 539 aa14.09□□□□□ -0.15
VIPAS39-202ENST00000343765 TMEM145Q8NBT3 493 aa14.09□□□□□ -0.15
VIPAS39-202ENST00000343765 OR52E1Q8NGJ3 308 aa14.09□□□□□ -0.15
VIPAS39-202ENST00000343765 RNF217Q8TC41 542 aa14.09□□□□□ -0.15
VIPAS39-202ENST00000343765 AMDHD1Q96NU7 426 aa14.09□□□□□ -0.15
VIPAS39-202ENST00000343765 ZNF607Q96SK3 696 aa14.09□□□□□ -0.15
VIPAS39-202ENST00000343765 UCK2Q9BZX2 261 aa14.09□□□□□ -0.15
VIPAS39-202ENST00000343765 DDX31Q9H8H2 851 aaKnown RBP14.09□□□□□ -0.15
VIPAS39-202ENST00000343765 P2RX2Q9UBL9 471 aa14.09□□□□□ -0.15
VIPAS39-202ENST00000343765 A0A1W2PQU0 124 aa14.09□□□□□ -0.15
VIPAS39-202ENST00000343765 BCAP31P51572 246 aa14.09□□□□□ -0.15
VIPAS39-202ENST00000343765 SLAMF1Q13291 335 aa14.09□□□□□ -0.15
VIPAS39-202ENST00000343765 WDR53Q7Z5U6 358 aaPredicted RBP14.09□□□□□ -0.15
VIPAS39-202ENST00000343765 KIAA1958Q8N8K9 716 aa14.09□□□□□ -0.15
VIPAS39-202ENST00000343765 PSMA8Q8TAA3 256 aa14.09□□□□□ -0.15
VIPAS39-202ENST00000343765 ZNF354BQ96LW1 612 aa14.09□□□□□ -0.15
VIPAS39-202ENST00000343765 RPP25Q9BUL9 199 aaKnown RBP14.09□□□□□ -0.15
VIPAS39-202ENST00000343765 TRMT61BQ9BVS5 477 aaKnown RBP14.09□□□□□ -0.15
VIPAS39-202ENST00000343765 DSN1Q9H410 356 aa14.09□□□□□ -0.15
VIPAS39-202ENST00000343765 ANKRA2Q9H9E1 313 aa14.09□□□□□ -0.15
VIPAS39-202ENST00000343765 SLC6A20Q9NP91 592 aa14.09□□□□□ -0.15
VIPAS39-202ENST00000343765 SLC35C2Q9NQQ7 365 aa14.09□□□□□ -0.15
VIPAS39-202ENST00000343765 FBXO8Q9NRD0 319 aa14.09□□□□□ -0.15
VIPAS39-202ENST00000343765 CLN6Q9NWW5 311 aa14.09□□□□□ -0.15
VIPAS39-202ENST00000343765 FBXL12Q9NXK8 326 aa14.09□□□□□ -0.15
VIPAS39-202ENST00000343765 SPHK1Q9NYA1 384 aa14.09□□□□□ -0.15
VIPAS39-202ENST00000343765 DNMT3AQ9Y6K1 912 aaPredicted RBP14.09□□□□□ -0.15
VIPAS39-202ENST00000343765 A8MVJ9 347 aa14.08□□□□□ -0.16
VIPAS39-202ENST00000343765 KPNA4O00629 521 aaPredicted RBP14.08□□□□□ -0.16
VIPAS39-202ENST00000343765 SLC31A1O15431 190 aa14.08□□□□□ -0.16
VIPAS39-202ENST00000343765 ZW10O43264 779 aa14.08□□□□□ -0.16
VIPAS39-202ENST00000343765 ENTPD6O75354 484 aa14.08□□□□□ -0.16
VIPAS39-202ENST00000343765 PDE9AO76083 593 aa14.08□□□□□ -0.16
VIPAS39-202ENST00000343765 TRIM23P36406 574 aa14.08□□□□□ -0.16
VIPAS39-202ENST00000343765 FRKP42685 505 aaPredicted RBP14.08□□□□□ -0.16
VIPAS39-202ENST00000343765 KCNJ5P48544 419 aa14.08□□□□□ -0.16
VIPAS39-202ENST00000343765 RAB8AP61006 207 aa14.08□□□□□ -0.16
VIPAS39-202ENST00000343765 TARDBPQ13148 414 aaKnown RBP eCLIP14.08□□□□□ -0.16
VIPAS39-202ENST00000343765 LASP1Q14847 261 aaKnown RBP14.08□□□□□ -0.16
VIPAS39-202ENST00000343765 C9orf50Q5SZB4 431 aa14.08□□□□□ -0.16
VIPAS39-202ENST00000343765 KIAA1161Q6NSJ0 714 aa14.08□□□□□ -0.16
VIPAS39-202ENST00000343765 MEX3DQ86XN8 651 aaKnown RBP14.08□□□□□ -0.16
VIPAS39-202ENST00000343765 CCDC116Q8IYX3 515 aa14.08□□□□□ -0.16
VIPAS39-202ENST00000343765 IQCF1Q8N6M8 205 aa14.08□□□□□ -0.16
VIPAS39-202ENST00000343765 WDR36Q8NI36 951 aaKnown RBP14.08□□□□□ -0.16
VIPAS39-202ENST00000343765 DACH2Q96NX9 599 aa14.08□□□□□ -0.16
VIPAS39-202ENST00000343765 CENPOQ9BU64 300 aa14.08□□□□□ -0.16
VIPAS39-202ENST00000343765 MKRN2Q9H000 416 aaKnown RBP14.08□□□□□ -0.16
VIPAS39-202ENST00000343765 QRSL1Q9H0R6 528 aaKnown RBP14.08□□□□□ -0.16
VIPAS39-202ENST00000343765 MTIF3Q9H2K0 278 aaKnown RBP14.08□□□□□ -0.16
VIPAS39-202ENST00000343765 MVB12BQ9H7P6 319 aa14.08□□□□□ -0.16
VIPAS39-202ENST00000343765 ATG4BQ9Y4P1 393 aa14.08□□□□□ -0.16
VIPAS39-202ENST00000343765 MYO10Q9HD67 2058 aa14.08□□□□□ -0.16
VIPAS39-202ENST00000343765 ALPK3Q96L96 1907 aa14.08□□□□□ -0.16
VIPAS39-202ENST00000343765 TLR4O00206 839 aa14.08□□□□□ -0.16
VIPAS39-202ENST00000343765 TBX19O60806 448 aa14.08□□□□□ -0.16
VIPAS39-202ENST00000343765 CNOT3O75175 753 aaKnown RBP14.08□□□□□ -0.16
VIPAS39-202ENST00000343765 CLEC3AO75596 197 aa14.08□□□□□ -0.16
VIPAS39-202ENST00000343765 RPLP0P05388 317 aaKnown RBP14.08□□□□□ -0.16
VIPAS39-202ENST00000343765 CEACAM5P06731 702 aa14.08□□□□□ -0.16
VIPAS39-202ENST00000343765 TNNI3P19429 210 aa14.08□□□□□ -0.16
VIPAS39-202ENST00000343765 C5AR1P21730 350 aa14.08□□□□□ -0.16
VIPAS39-202ENST00000343765 SERPINB1P30740 379 aa14.08□□□□□ -0.16
VIPAS39-202ENST00000343765 RPS3AP61247 264 aaKnown RBP14.08□□□□□ -0.16
VIPAS39-202ENST00000343765 LSM11P83369 360 aaKnown RBP eCLIP14.08□□□□□ -0.16
VIPAS39-202ENST00000343765 DUSP2Q05923 314 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms