RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 NEDD4LQ96PU5 975 aa14.34□□□□□ -0.11
UBE3B-202ENST00000342494 TAS2R10Q9NYW0 307 aa14.34□□□□□ -0.11
UBE3B-202ENST00000342494 GPRC5BQ9NZH0 403 aa14.34□□□□□ -0.11
UBE3B-202ENST00000342494 ANKMY1Q9P2S6 941 aa14.34□□□□□ -0.11
UBE3B-202ENST00000342494 ATXN7L1Q9ULK2 861 aaPredicted RBP14.34□□□□□ -0.11
UBE3B-202ENST00000342494 DPPA5A6NC42 116 aa14.34□□□□□ -0.11
UBE3B-202ENST00000342494 SMAD9O15198 467 aaKnown RBP14.34□□□□□ -0.11
UBE3B-202ENST00000342494 ATF6P18850 670 aa14.34□□□□□ -0.11
UBE3B-202ENST00000342494 NAA10P41227 235 aaPredicted RBP14.34□□□□□ -0.11
UBE3B-202ENST00000342494 TSPEARQ8WU66 669 aa14.34□□□□□ -0.11
UBE3B-202ENST00000342494 KCNN1Q92952 543 aa14.34□□□□□ -0.11
UBE3B-202ENST00000342494 DMRTB1Q96MA1 342 aa14.34□□□□□ -0.11
UBE3B-202ENST00000342494 DOHHQ9BU89 302 aa14.34□□□□□ -0.11
UBE3B-202ENST00000342494 MTG2Q9H4K7 406 aa14.34□□□□□ -0.11
UBE3B-202ENST00000342494 NANSQ9NR45 359 aa14.34□□□□□ -0.11
UBE3B-202ENST00000342494 AK4P27144 223 aaPredicted RBP14.34□□□□□ -0.11
UBE3B-202ENST00000342494 ALG10BQ5I7T1 473 aa14.34□□□□□ -0.11
UBE3B-202ENST00000342494 TCEAL3Q969E4 200 aa14.34□□□□□ -0.11
UBE3B-202ENST00000342494 SCP2D1Q9UJQ7 156 aa14.34□□□□□ -0.11
UBE3B-202ENST00000342494 SH2B3Q9UQQ2 575 aa14.34□□□□□ -0.11
UBE3B-202ENST00000342494 PCDHGA10Q9Y5H3 936 aa14.34□□□□□ -0.11
UBE3B-202ENST00000342494 GJE1A6NN92 205 aa14.33□□□□□ -0.11
UBE3B-202ENST00000342494 SLC10A2Q12908 348 aaPredicted RBP14.33□□□□□ -0.11
UBE3B-202ENST00000342494 RPA4Q13156 261 aa14.33□□□□□ -0.11
UBE3B-202ENST00000342494 VMACQ2NL98 169 aa14.33□□□□□ -0.11
UBE3B-202ENST00000342494 IL17RCQ8NAC3 791 aa14.33□□□□□ -0.11
UBE3B-202ENST00000342494 APOOQ9BUR5 198 aa14.33□□□□□ -0.11
UBE3B-202ENST00000342494 STRA6Q9BX79 667 aa14.33□□□□□ -0.11
UBE3B-202ENST00000342494 ACAD8Q9UKU7 415 aa14.33□□□□□ -0.11
UBE3B-202ENST00000342494 DHDHQ9UQ10 334 aa14.33□□□□□ -0.11
UBE3B-202ENST00000342494 A6NL46 340 aa14.33□□□□□ -0.12
UBE3B-202ENST00000342494 P2RY2P41231 377 aa14.33□□□□□ -0.12
UBE3B-202ENST00000342494 RPS26P62854 115 aaKnown RBP14.33□□□□□ -0.12
UBE3B-202ENST00000342494 CLCA4Q14CN2 919 aa14.33□□□□□ -0.12
UBE3B-202ENST00000342494 NR0B2Q15466 257 aa14.33□□□□□ -0.12
UBE3B-202ENST00000342494 EIF5AL1Q6IS14 154 aaKnown RBP14.33□□□□□ -0.12
UBE3B-202ENST00000342494 ACVR1CQ8NER5 493 aa14.33□□□□□ -0.12
UBE3B-202ENST00000342494 CCNL2Q96S94 520 aaPredicted RBP14.33□□□□□ -0.12
UBE3B-202ENST00000342494 PIP5K1AQ99755 562 aa14.33□□□□□ -0.12
UBE3B-202ENST00000342494 TOR3AQ9H497 397 aa14.33□□□□□ -0.12
UBE3B-202ENST00000342494 BAIAP2Q9UQB8 552 aa14.33□□□□□ -0.12
UBE3B-202ENST00000342494 CDKN2DP55273 166 aa14.33□□□□□ -0.12
UBE3B-202ENST00000342494 TAS2R38P59533 333 aa14.33□□□□□ -0.12
UBE3B-202ENST00000342494 SF3B4Q15427 424 aaKnown RBP eCLIP14.33□□□□□ -0.123e-11■■■■■ 37.6
UBE3B-202ENST00000342494 TRIM73Q86UV7 250 aa14.33□□□□□ -0.12
UBE3B-202ENST00000342494 LMO3Q8TAP4 145 aa14.33□□□□□ -0.12
UBE3B-202ENST00000342494 TOE1Q96GM8 510 aaKnown RBP14.33□□□□□ -0.12
UBE3B-202ENST00000342494 PITX2Q99697 317 aa14.33□□□□□ -0.12
UBE3B-202ENST00000342494 ZNF701Q9NV72 531 aaPredicted RBP14.33□□□□□ -0.12
UBE3B-202ENST00000342494 IFT172Q9UG01 1749 aa14.33□□□□□ -0.12
UBE3B-202ENST00000342494 IGKV6D-21A0A0A0MT36 114 aa14.33□□□□□ -0.12
UBE3B-202ENST00000342494 PLATP00750 562 aa14.33□□□□□ -0.12
UBE3B-202ENST00000342494 ANXA3P12429 323 aa14.33□□□□□ -0.12
UBE3B-202ENST00000342494 GNRHRP30968 328 aa14.33□□□□□ -0.12
UBE3B-202ENST00000342494 FXYD6P3P58550 94 aa14.33□□□□□ -0.12
UBE3B-202ENST00000342494 MANEALQ5VSG8 457 aa14.33□□□□□ -0.12
UBE3B-202ENST00000342494 HMBOX1Q6NT76 420 aa14.33□□□□□ -0.12
UBE3B-202ENST00000342494 SPRYD4Q8WW59 207 aaPredicted RBP14.33□□□□□ -0.12
UBE3B-202ENST00000342494 GCGRP47871 477 aa14.32□□□□□ -0.12
UBE3B-202ENST00000342494 GRIN2CQ14957 1233 aa14.32□□□□□ -0.12
UBE3B-202ENST00000342494 MEP1AQ16819 746 aa14.32□□□□□ -0.12
UBE3B-202ENST00000342494 ANKDD1AQ495B1 522 aa14.32□□□□□ -0.12
UBE3B-202ENST00000342494 KCTD9Q7L273 389 aa14.32□□□□□ -0.12
UBE3B-202ENST00000342494 LRRTM3Q86VH5 581 aa14.32□□□□□ -0.12
UBE3B-202ENST00000342494 FGF13Q92913 245 aa14.32□□□□□ -0.12
UBE3B-202ENST00000342494 DDIT4LQ96D03 193 aa14.32□□□□□ -0.12
UBE3B-202ENST00000342494 ZNF471Q9BX82 626 aaPredicted RBP14.32□□□□□ -0.12
UBE3B-202ENST00000342494 C1orf21Q9H246 121 aa14.32□□□□□ -0.12
UBE3B-202ENST00000342494 PRAMEF2O60811 474 aa14.32□□□□□ -0.12
UBE3B-202ENST00000342494 ARG2P78540 354 aa14.32□□□□□ -0.12
UBE3B-202ENST00000342494 CHRFAM7AQ494W8 412 aa14.32□□□□□ -0.12
UBE3B-202ENST00000342494 UNC50Q53HI1 259 aa14.32□□□□□ -0.12
UBE3B-202ENST00000342494 RAB11FIP2Q7L804 512 aa14.32□□□□□ -0.12
UBE3B-202ENST00000342494 HLA-CQ95604 372 aa14.32□□□□□ -0.12
UBE3B-202ENST00000342494 GSKIPQ9P0R6 139 aa14.32□□□□□ -0.12
UBE3B-202ENST00000342494 ENTPD2Q9Y5L3 495 aa14.32□□□□□ -0.12
UBE3B-202ENST00000342494 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.32□□□□□ -0.12
UBE3B-202ENST00000342494 GGT3PA6NGU5 568 aa14.32□□□□□ -0.12
UBE3B-202ENST00000342494 FGF3P11487 239 aaPredicted RBP14.32□□□□□ -0.12
UBE3B-202ENST00000342494 CD72P21854 359 aa14.32□□□□□ -0.12
UBE3B-202ENST00000342494 ACTC1P68032 377 aa14.32□□□□□ -0.12
UBE3B-202ENST00000342494 ACTA1P68133 377 aa14.32□□□□□ -0.12
UBE3B-202ENST00000342494 TIGD4Q8IY51 512 aa14.32□□□□□ -0.12
UBE3B-202ENST00000342494 CREB3L4Q8TEY5 395 aa14.32□□□□□ -0.12
UBE3B-202ENST00000342494 NANOS1Q8WY41 292 aaKnown RBP14.32□□□□□ -0.12
UBE3B-202ENST00000342494 NUFIP1Q9UHK0 495 aaKnown RBP14.32□□□□□ -0.12
UBE3B-202ENST00000342494 CNMDO75829 334 aa14.32□□□□□ -0.12
UBE3B-202ENST00000342494 CD3GP09693 182 aa14.32□□□□□ -0.12
UBE3B-202ENST00000342494 MAGEA2P43356 314 aa14.32□□□□□ -0.12
UBE3B-202ENST00000342494 ARSDP51689 593 aa14.32□□□□□ -0.12
UBE3B-202ENST00000342494 GRB7Q14451 532 aa14.32□□□□□ -0.12
UBE3B-202ENST00000342494 ZC3H3Q8IXZ2 948 aaKnown RBP14.32□□□□□ -0.12
UBE3B-202ENST00000342494 TM9SF4Q92544 642 aa14.32□□□□□ -0.12
UBE3B-202ENST00000342494 HOXD1Q9GZZ0 328 aa14.32□□□□□ -0.12
UBE3B-202ENST00000342494 NUDT15Q9NV35 164 aa14.32□□□□□ -0.12
UBE3B-202ENST00000342494 PTTG2Q9NZH5 202 aa14.32□□□□□ -0.12
UBE3B-202ENST00000342494 HOXD8P13378 290 aaPredicted RBP14.32□□□□□ -0.12
UBE3B-202ENST00000342494 FDXRP22570 491 aa14.32□□□□□ -0.12
UBE3B-202ENST00000342494 CASTOR1Q8WTX7 329 aa14.32□□□□□ -0.12
UBE3B-202ENST00000342494 BORCS6Q96GS4 357 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms