RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 PAIP2Q9BPZ3 127 aaKnown RBP17.85■□□□□ 0.45
SYNE4-202ENST00000340477 SIRT5Q9NXA8 310 aa17.85■□□□□ 0.45
SYNE4-202ENST00000340477 ZNF223Q9UK11 482 aaPredicted RBP17.85■□□□□ 0.45
SYNE4-202ENST00000340477 UTS2RQ9UKP6 389 aa17.85■□□□□ 0.45
SYNE4-202ENST00000340477 ERVK-19Q9WJR5 959 aa17.85■□□□□ 0.45
SYNE4-202ENST00000340477 ENTPD4Q9Y227 616 aa17.85■□□□□ 0.45
SYNE4-202ENST00000340477 TRAF6Q9Y4K3 522 aa17.85■□□□□ 0.45
SYNE4-202ENST00000340477 WDR91A4D1P6 747 aa17.84■□□□□ 0.45
SYNE4-202ENST00000340477 TMEM114B3SHH9 223 aa17.84■□□□□ 0.45
SYNE4-202ENST00000340477 MAN1A2O60476 641 aa17.84■□□□□ 0.45
SYNE4-202ENST00000340477 SEC22BO75396 215 aa17.84■□□□□ 0.45
SYNE4-202ENST00000340477 SNUPNO95149 360 aaKnown RBP17.84■□□□□ 0.45
SYNE4-202ENST00000340477 SERPINE1P05121 402 aa17.84■□□□□ 0.45
SYNE4-202ENST00000340477 IL3P08700 152 aa17.84■□□□□ 0.45
SYNE4-202ENST00000340477 CSNK2A2P19784 350 aaPredicted RBP17.84■□□□□ 0.45
SYNE4-202ENST00000340477 NT5EP21589 574 aa17.84■□□□□ 0.45
SYNE4-202ENST00000340477 CD96P40200 585 aa17.84■□□□□ 0.45
SYNE4-202ENST00000340477 HLCSP50747 726 aa17.84■□□□□ 0.45
SYNE4-202ENST00000340477 RNF4P78317 190 aa17.84■□□□□ 0.45
SYNE4-202ENST00000340477 GPALPP1Q8IXQ4 340 aa17.84■□□□□ 0.45
SYNE4-202ENST00000340477 KIRREL3Q8IZU9 778 aa17.84■□□□□ 0.45
SYNE4-202ENST00000340477 BCORP1Q8N888 145 aa17.84■□□□□ 0.45
SYNE4-202ENST00000340477 AGR3Q8TD06 166 aa17.84■□□□□ 0.45
SYNE4-202ENST00000340477 ZNF721Q8TF20 911 aa17.84■□□□□ 0.45
SYNE4-202ENST00000340477 C16orf78Q8WTQ4 265 aa17.84■□□□□ 0.45
SYNE4-202ENST00000340477 TWIST2Q8WVJ9 160 aa17.84■□□□□ 0.45
SYNE4-202ENST00000340477 ASB15Q8WXK1 588 aa17.84■□□□□ 0.45
SYNE4-202ENST00000340477 LRTM1Q9HBL6 345 aa17.84■□□□□ 0.45
SYNE4-202ENST00000340477 TNFRSF12AQ9NP84 129 aa17.84■□□□□ 0.45
SYNE4-202ENST00000340477 ASF1BQ9NVP2 202 aa17.84■□□□□ 0.45
SYNE4-202ENST00000340477 C1orf109Q9NX04 203 aa17.84■□□□□ 0.45
SYNE4-202ENST00000340477 NKIRAS1Q9NYS0 192 aa17.84■□□□□ 0.45
SYNE4-202ENST00000340477 MYOTQ9UBF9 498 aa17.84■□□□□ 0.45
SYNE4-202ENST00000340477 ERVK-11Q9UQG0 969 aa17.84■□□□□ 0.45
SYNE4-202ENST00000340477 PCDHGB6Q9Y5F9 930 aa17.84■□□□□ 0.45
SYNE4-202ENST00000340477 OR6C76A6NM76 312 aa17.83■□□□□ 0.44
SYNE4-202ENST00000340477 WASHC1A8K0Z3 465 aa17.83■□□□□ 0.44
SYNE4-202ENST00000340477 SLC25A12O75746 678 aa17.83■□□□□ 0.44
SYNE4-202ENST00000340477 RASAL1O95294 804 aa17.83■□□□□ 0.44
SYNE4-202ENST00000340477 CRYABP02511 175 aaKnown RBP17.83■□□□□ 0.44
SYNE4-202ENST00000340477 FGF4P08620 206 aa17.83■□□□□ 0.44
SYNE4-202ENST00000340477 PRPH2P23942 346 aa17.83■□□□□ 0.44
SYNE4-202ENST00000340477 GRK2P25098 689 aa17.83■□□□□ 0.44
SYNE4-202ENST00000340477 TRHRP34981 398 aaPredicted RBP17.83■□□□□ 0.44
SYNE4-202ENST00000340477 RAE1P78406 368 aaKnown RBP17.83■□□□□ 0.44
SYNE4-202ENST00000340477 ELOAQ14241 798 aaKnown RBP17.83■□□□□ 0.44
SYNE4-202ENST00000340477 CHI3L2Q15782 390 aa17.83■□□□□ 0.44
SYNE4-202ENST00000340477 CYP4Z2PQ8N1L4 340 aa17.83■□□□□ 0.44
SYNE4-202ENST00000340477 LRRC25Q8N386 305 aaPredicted RBP17.83■□□□□ 0.44
SYNE4-202ENST00000340477 ANKRD42Q8N9B4 389 aa17.83■□□□□ 0.44
SYNE4-202ENST00000340477 MDS2Q8NDY4 140 aa17.83■□□□□ 0.44
SYNE4-202ENST00000340477 NUBPLQ8TB37 319 aa17.83■□□□□ 0.44
SYNE4-202ENST00000340477 MIEF1Q9NQG6 463 aa17.83■□□□□ 0.44
SYNE4-202ENST00000340477 WBP11Q9Y2W2 641 aaKnown RBP17.83■□□□□ 0.44
SYNE4-202ENST00000340477 POLR3HQ9Y535 204 aaPredicted RBP17.83■□□□□ 0.44
SYNE4-202ENST00000340477 DNAJC15Q9Y5T4 150 aa17.83■□□□□ 0.44
SYNE4-202ENST00000340477 MYO18BQ8IUG5 2567 aa17.83■□□□□ 0.44
SYNE4-202ENST00000340477 CROCCQ5TZA2 2017 aa17.82■□□□□ 0.44
SYNE4-202ENST00000340477 A8MVJ9 347 aa17.82■□□□□ 0.44
SYNE4-202ENST00000340477 WWP2O00308 870 aa17.82■□□□□ 0.44
SYNE4-202ENST00000340477 OR2J2O76002 312 aa17.82■□□□□ 0.44
SYNE4-202ENST00000340477 IGKV3-11P04433 115 aa17.82■□□□□ 0.44
SYNE4-202ENST00000340477 MAGOHP61326 146 aaKnown RBP17.82■□□□□ 0.44
SYNE4-202ENST00000340477 HLA-DQA1Q5Y7H0 255 aa17.82■□□□□ 0.44
SYNE4-202ENST00000340477 SPINK14Q6IE38 97 aa17.82■□□□□ 0.44
SYNE4-202ENST00000340477 NOXRED1Q6NXP6 359 aa17.82■□□□□ 0.44
SYNE4-202ENST00000340477 IKBIPQ70UQ0 350 aa17.82■□□□□ 0.44
SYNE4-202ENST00000340477 GOLGA6L1Q8N7Z2 621 aa17.82■□□□□ 0.44
SYNE4-202ENST00000340477 ZNF321PQ8N8H1 164 aa17.82■□□□□ 0.44
SYNE4-202ENST00000340477 SLC22A8Q8TCC7 542 aa17.82■□□□□ 0.44
SYNE4-202ENST00000340477 GRHL3Q8TE85 626 aa17.82■□□□□ 0.44
SYNE4-202ENST00000340477 UCN3Q969E3 161 aa17.82■□□□□ 0.44
SYNE4-202ENST00000340477 EXOSC8Q96B26 276 aaKnown RBP17.82■□□□□ 0.44
SYNE4-202ENST00000340477 C19orf60Q96EN9 201 aa17.82■□□□□ 0.44
SYNE4-202ENST00000340477 SIGLEC12Q96PQ1 595 aa17.82■□□□□ 0.44
SYNE4-202ENST00000340477 GAL3ST4Q96RP7 486 aa17.82■□□□□ 0.44
SYNE4-202ENST00000340477 CCT7Q99832 543 aa17.82■□□□□ 0.44
SYNE4-202ENST00000340477 BRINP2Q9C0B6 783 aa17.82■□□□□ 0.44
SYNE4-202ENST00000340477 CLMPQ9H6B4 373 aa17.82■□□□□ 0.44
SYNE4-202ENST00000340477 CXorf21Q9HAI6 301 aa17.82■□□□□ 0.44
SYNE4-202ENST00000340477 TMBIM4Q9HC24 238 aa17.82■□□□□ 0.44
SYNE4-202ENST00000340477 MYNNQ9NPC7 610 aa17.82■□□□□ 0.44
SYNE4-202ENST00000340477 KLHL1Q9NR64 748 aa17.82■□□□□ 0.44
SYNE4-202ENST00000340477 RYDENQ9NUL5 291 aaKnown RBP17.82■□□□□ 0.44
SYNE4-202ENST00000340477 OLAHQ9NV23 265 aa17.82■□□□□ 0.44
SYNE4-202ENST00000340477 HPF1Q9NWY4 346 aa17.82■□□□□ 0.44
SYNE4-202ENST00000340477 EHD3Q9NZN3 535 aa17.82■□□□□ 0.44
SYNE4-202ENST00000340477 CES1P1Q9UKY3 287 aa17.82■□□□□ 0.44
SYNE4-202ENST00000340477 TMED5Q9Y3A6 229 aa17.82■□□□□ 0.44
SYNE4-202ENST00000340477 RP1L1Q8IWN7 2480 aaPredicted RBP17.82■□□□□ 0.44
SYNE4-202ENST00000340477 PRRC2CQ9Y520 2896 aaKnown RBP17.82■□□□□ 0.44
SYNE4-202ENST00000340477 NBASA2RRP1 2371 aa17.82■□□□□ 0.44
SYNE4-202ENST00000340477 TMEM120BA0PK00 339 aa17.81■□□□□ 0.44
SYNE4-202ENST00000340477 TMEM233B4DJY2 109 aa17.81■□□□□ 0.44
SYNE4-202ENST00000340477 PRKNO60260 465 aaPredicted RBP17.81■□□□□ 0.44
SYNE4-202ENST00000340477 ATP1B1P05026 303 aa17.81■□□□□ 0.44
SYNE4-202ENST00000340477 LINC00032P0C843 101 aa17.81■□□□□ 0.44
SYNE4-202ENST00000340477 MAPK1P28482 360 aa17.81■□□□□ 0.44
SYNE4-202ENST00000340477 FEN1P39748 380 aaKnown RBP17.81■□□□□ 0.44
SYNE4-202ENST00000340477 HK2P52789 917 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms