RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 SORBS2O94875 1100 aaKnown RBP14.19□□□□□ -0.14
UBE3B-201ENST00000340074 CPMP14384 443 aa14.19□□□□□ -0.14
UBE3B-201ENST00000340074 GSTM5P46439 218 aa14.19□□□□□ -0.14
UBE3B-201ENST00000340074 SPRED3Q2MJR0 410 aa14.19□□□□□ -0.14
UBE3B-201ENST00000340074 GALNTL6Q49A17 601 aa14.19□□□□□ -0.14
UBE3B-201ENST00000340074 RFTN2Q52LD8 501 aaPredicted RBP14.19□□□□□ -0.14
UBE3B-201ENST00000340074 XKR7Q5GH72 579 aa14.19□□□□□ -0.14
UBE3B-201ENST00000340074 LGI4Q8N135 537 aa14.19□□□□□ -0.14
UBE3B-201ENST00000340074 GOLGA6L1Q8N7Z2 621 aa14.19□□□□□ -0.14
UBE3B-201ENST00000340074 SENP5Q96HI0 755 aaPredicted RBP14.19□□□□□ -0.14
UBE3B-201ENST00000340074 FBXL20Q96IG2 436 aa14.19□□□□□ -0.14
UBE3B-201ENST00000340074 C3orf30Q96M34 536 aa14.19□□□□□ -0.14
UBE3B-201ENST00000340074 RNF32Q9H0A6 362 aa14.19□□□□□ -0.14
UBE3B-201ENST00000340074 SLAMF7Q9NQ25 335 aa14.19□□□□□ -0.14
UBE3B-201ENST00000340074 COPS7AQ9UBW8 275 aa14.19□□□□□ -0.14
UBE3B-201ENST00000340074 UTS2RQ9UKP6 389 aa14.19□□□□□ -0.14
UBE3B-201ENST00000340074 PSME2Q9UL46 239 aa14.19□□□□□ -0.14
UBE3B-201ENST00000340074 RAP2CQ9Y3L5 183 aa14.19□□□□□ -0.14
UBE3B-201ENST00000340074 ATP6AP2A0A1C7CYW4 349 aa14.18□□□□□ -0.14
UBE3B-201ENST00000340074 OR5H15A6NDH6 313 aa14.18□□□□□ -0.14
UBE3B-201ENST00000340074 TTLL8A6PVC2 850 aa14.18□□□□□ -0.14
UBE3B-201ENST00000340074 GABRR3A8MPY1 467 aa14.18□□□□□ -0.14
UBE3B-201ENST00000340074 ATP6AP2O75787 350 aa14.18□□□□□ -0.14
UBE3B-201ENST00000340074 SNUPNO95149 360 aaKnown RBP14.18□□□□□ -0.14
UBE3B-201ENST00000340074 IGKV3-11P04433 115 aa14.18□□□□□ -0.14
UBE3B-201ENST00000340074 PORP16435 677 aaPredicted RBP14.18□□□□□ -0.14
UBE3B-201ENST00000340074 GALNSP34059 522 aa14.18□□□□□ -0.14
UBE3B-201ENST00000340074 FEN1P39748 380 aaKnown RBP14.18□□□□□ -0.14
UBE3B-201ENST00000340074 TNFSF10P50591 281 aa14.18□□□□□ -0.14
UBE3B-201ENST00000340074 MLLT10P55197 1068 aa14.18□□□□□ -0.14
UBE3B-201ENST00000340074 MLF1P58340 268 aa14.18□□□□□ -0.14
UBE3B-201ENST00000340074 ERVK-8P63133 956 aa14.18□□□□□ -0.14
UBE3B-201ENST00000340074 RPL38P63173 70 aaKnown RBP14.18□□□□□ -0.14
UBE3B-201ENST00000340074 DUSP2Q05923 314 aa14.18□□□□□ -0.14
UBE3B-201ENST00000340074 C2orf80Q0P641 193 aa14.18□□□□□ -0.14
UBE3B-201ENST00000340074 ZNF267Q14586 743 aaPredicted RBP14.18□□□□□ -0.14
UBE3B-201ENST00000340074 ZNF169Q14929 603 aaPredicted RBP14.18□□□□□ -0.14
UBE3B-201ENST00000340074 HEPACAMQ14CZ8 416 aa14.18□□□□□ -0.14
UBE3B-201ENST00000340074 TLR1Q15399 786 aa14.18□□□□□ -0.14
UBE3B-201ENST00000340074 HSDL2Q6YN16 418 aa14.18□□□□□ -0.14
UBE3B-201ENST00000340074 ARMC10Q8N2F6 343 aa14.18□□□□□ -0.14
UBE3B-201ENST00000340074 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.18□□□□□ -0.14
UBE3B-201ENST00000340074 CNRIP1Q96F85 164 aaPredicted RBP14.18□□□□□ -0.14
UBE3B-201ENST00000340074 FCRL1Q96LA6 429 aa14.18□□□□□ -0.14
UBE3B-201ENST00000340074 CNPPD1Q9BV87 410 aa14.18□□□□□ -0.14
UBE3B-201ENST00000340074 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.18□□□□□ -0.14
UBE3B-201ENST00000340074 LIN28AQ9H9Z2 209 aaKnown RBP14.18□□□□□ -0.14
UBE3B-201ENST00000340074 CXorf21Q9HAI6 301 aa14.18□□□□□ -0.14
UBE3B-201ENST00000340074 MYNNQ9NPC7 610 aa14.18□□□□□ -0.14
UBE3B-201ENST00000340074 ANKRD10Q9NXR5 420 aa14.18□□□□□ -0.14
UBE3B-201ENST00000340074 GIMAP2Q9UG22 337 aa14.18□□□□□ -0.14
UBE3B-201ENST00000340074 ERVK-19Q9WJR5 959 aa14.18□□□□□ -0.14
UBE3B-201ENST00000340074 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.18□□□□□ -0.14
UBE3B-201ENST00000340074 ZNF780BQ9Y6R6 833 aa14.18□□□□□ -0.14
UBE3B-201ENST00000340074 EXPH5Q8NEV8 1989 aa14.17□□□□□ -0.14
UBE3B-201ENST00000340074 TMEM200CA6NKL6 621 aa14.17□□□□□ -0.14
UBE3B-201ENST00000340074 PEX11AO75192 247 aa14.17□□□□□ -0.14
UBE3B-201ENST00000340074 JUNP05412 331 aaKnown RBP14.17□□□□□ -0.14
UBE3B-201ENST00000340074 CSNK2A2P19784 350 aaPredicted RBP14.17□□□□□ -0.14
UBE3B-201ENST00000340074 NT5EP21589 574 aa14.17□□□□□ -0.14
UBE3B-201ENST00000340074 TACR1P25103 407 aa14.17□□□□□ -0.14
UBE3B-201ENST00000340074 RPL14P50914 215 aaKnown RBP14.17□□□□□ -0.14
UBE3B-201ENST00000340074 TLE1Q04724 770 aa14.17□□□□□ -0.14
UBE3B-201ENST00000340074 TUBA3CQ13748 450 aa14.17□□□□□ -0.14
UBE3B-201ENST00000340074 PDCD2Q16342 344 aaPredicted RBP14.17□□□□□ -0.14
UBE3B-201ENST00000340074 FAM71E1Q6IPT2 247 aa14.17□□□□□ -0.14
UBE3B-201ENST00000340074 TUBA3EQ6PEY2 450 aa14.17□□□□□ -0.14
UBE3B-201ENST00000340074 C16orf47Q6ZP98 133 aaPredicted RBP14.17□□□□□ -0.14
UBE3B-201ENST00000340074 EXOSC8Q96B26 276 aaKnown RBP14.17□□□□□ -0.14
UBE3B-201ENST00000340074 C19orf60Q96EN9 201 aa14.17□□□□□ -0.14
UBE3B-201ENST00000340074 EGLN2Q96KS0 407 aa14.17□□□□□ -0.14
UBE3B-201ENST00000340074 ART5Q96L15 291 aa14.17□□□□□ -0.14
UBE3B-201ENST00000340074 ZNF681Q96N22 645 aa14.17□□□□□ -0.14
UBE3B-201ENST00000340074 CCT7Q99832 543 aa14.17□□□□□ -0.14
UBE3B-201ENST00000340074 ABI3Q9P2A4 366 aa14.17□□□□□ -0.14
UBE3B-201ENST00000340074 HAO1Q9UJM8 370 aa14.17□□□□□ -0.14
UBE3B-201ENST00000340074 TMED5Q9Y3A6 229 aa14.17□□□□□ -0.14
UBE3B-201ENST00000340074 HMGB1P1B2RPK0 211 aaPredicted RBP14.16□□□□□ -0.14
UBE3B-201ENST00000340074 FCHO1O14526 889 aa14.16□□□□□ -0.14
UBE3B-201ENST00000340074 ITGA10O75578 1167 aa14.16□□□□□ -0.14
UBE3B-201ENST00000340074 ATP1B1P05026 303 aa14.16□□□□□ -0.14
UBE3B-201ENST00000340074 CT62P0C5K7 136 aa14.16□□□□□ -0.14
UBE3B-201ENST00000340074 PLA2G2AP14555 144 aa14.16□□□□□ -0.14
UBE3B-201ENST00000340074 DDCP20711 480 aa14.16□□□□□ -0.14
UBE3B-201ENST00000340074 PTGER1P34995 402 aa14.16□□□□□ -0.14
UBE3B-201ENST00000340074 CD96P40200 585 aa14.16□□□□□ -0.14
UBE3B-201ENST00000340074 RNF4P78317 190 aa14.16□□□□□ -0.14
UBE3B-201ENST00000340074 PRSS53Q2L4Q9 553 aa14.16□□□□□ -0.14
UBE3B-201ENST00000340074 ATP6AP1LQ52LC2 224 aa14.16□□□□□ -0.14
UBE3B-201ENST00000340074 PRR30Q53SZ7 412 aaPredicted RBP14.16□□□□□ -0.14
UBE3B-201ENST00000340074 ZNF468Q5VIY5 522 aaPredicted RBP14.16□□□□□ -0.14
UBE3B-201ENST00000340074 GALNT12Q8IXK2 581 aa14.16□□□□□ -0.14
UBE3B-201ENST00000340074 PPP1R36Q96LQ0 422 aa14.16□□□□□ -0.14
UBE3B-201ENST00000340074 PPP3R2Q96LZ3 170 aa14.16□□□□□ -0.14
UBE3B-201ENST00000340074 SIGLEC12Q96PQ1 595 aa14.16□□□□□ -0.14
UBE3B-201ENST00000340074 UTP23Q9BRU9 249 aaKnown RBP14.16□□□□□ -0.14
UBE3B-201ENST00000340074 TRIM4Q9C037 500 aa14.16□□□□□ -0.14
UBE3B-201ENST00000340074 MANSC1Q9H8J5 431 aa14.16□□□□□ -0.14
UBE3B-201ENST00000340074 MIEF1Q9NQG6 463 aa14.16□□□□□ -0.14
UBE3B-201ENST00000340074 PFDN4Q9NQP4 134 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms