RNA–Protein interactions for RNA: ENST00000339950.4

USP1-201, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP1, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-201ENST00000339950 NUFIP1Q9UHK0 495 aaKnown RBP11.36□□□□□ -0.59
USP1-201ENST00000339950 CCL27Q9Y4X3 112 aa11.36□□□□□ -0.59
USP1-201ENST00000339950 NUAK1O60285 661 aa11.35□□□□□ -0.59
USP1-201ENST00000339950 REM1O75628 298 aa11.35□□□□□ -0.59
USP1-201ENST00000339950 PDE9AO76083 593 aa11.35□□□□□ -0.59
USP1-201ENST00000339950 CBSLP0DN79 551 aa11.35□□□□□ -0.59
USP1-201ENST00000339950 CEBPBP17676 345 aa11.35□□□□□ -0.59
USP1-201ENST00000339950 CBSP35520 551 aa11.35□□□□□ -0.59
USP1-201ENST00000339950 SLC3A1Q07837 685 aa11.35□□□□□ -0.59
USP1-201ENST00000339950 GBX1Q14549 363 aa11.35□□□□□ -0.59
USP1-201ENST00000339950 SPHARQ15513 63 aa11.35□□□□□ -0.59
USP1-201ENST00000339950 TBRG1Q3YBR2 411 aa11.35□□□□□ -0.59
USP1-201ENST00000339950 TIMM50Q3ZCQ8 353 aa11.35□□□□□ -0.59
USP1-201ENST00000339950 CCDC71Q8IV32 467 aaPredicted RBP11.35□□□□□ -0.59
USP1-201ENST00000339950 OR8H3Q8N146 312 aa11.35□□□□□ -0.59
USP1-201ENST00000339950 ZNF433Q8N7K0 673 aaPredicted RBP11.35□□□□□ -0.59
USP1-201ENST00000339950 ADAMTS16Q8TE57 1224 aa11.35□□□□□ -0.59
USP1-201ENST00000339950 TIFAQ96CG3 184 aa11.35□□□□□ -0.59
USP1-201ENST00000339950 FAM46AQ96IP4 442 aaKnown RBP11.35□□□□□ -0.59
USP1-201ENST00000339950 PIP5K1AQ99755 562 aa11.35□□□□□ -0.59
USP1-201ENST00000339950 EFCAB11Q9BUY7 163 aa11.35□□□□□ -0.59
USP1-201ENST00000339950 CWH43Q9H720 699 aa11.35□□□□□ -0.59
USP1-201ENST00000339950 WSB2Q9NYS7 404 aaPredicted RBP11.35□□□□□ -0.59
USP1-201ENST00000339950 I3L521 148 aa11.35□□□□□ -0.59
USP1-201ENST00000339950 RASGRP1O95267 797 aa11.35□□□□□ -0.59
USP1-201ENST00000339950 CTSLP07711 333 aa11.35□□□□□ -0.59
USP1-201ENST00000339950 NPPBP16860 134 aa11.35□□□□□ -0.59
USP1-201ENST00000339950 MAN2A2P49641 1150 aa11.35□□□□□ -0.59
USP1-201ENST00000339950 RGS6P49758 472 aa11.35□□□□□ -0.59
USP1-201ENST00000339950 CSTF1Q05048 431 aaKnown RBP11.35□□□□□ -0.59
USP1-201ENST00000339950 MTAPQ13126 283 aa11.35□□□□□ -0.59
USP1-201ENST00000339950 SLC30A8Q8IWU4 369 aa11.35□□□□□ -0.59
USP1-201ENST00000339950 TIGD4Q8IY51 512 aa11.35□□□□□ -0.59
USP1-201ENST00000339950 OR4K5Q8NGD3 323 aa11.35□□□□□ -0.59
USP1-201ENST00000339950 CLEC4MQ9H2X3 399 aaPredicted RBP11.35□□□□□ -0.59
USP1-201ENST00000339950 MRPL15Q9P015 296 aaKnown RBP11.35□□□□□ -0.59
USP1-201ENST00000339950 DNMT3BQ9UBC3 853 aaKnown RBP11.35□□□□□ -0.59
USP1-201ENST00000339950 OR51B4Q9Y5P0 310 aa11.35□□□□□ -0.59
USP1-201ENST00000339950 GREB1Q4ZG55 1949 aa11.35□□□□□ -0.59
USP1-201ENST00000339950 FAM170BA6NMN3 283 aa11.35□□□□□ -0.59
USP1-201ENST00000339950 ARHGAP33O14559 1287 aa11.35□□□□□ -0.59
USP1-201ENST00000339950 GYPBP06028 91 aa11.35□□□□□ -0.59
USP1-201ENST00000339950 HOXB3P14651 431 aaPredicted RBP11.35□□□□□ -0.59
USP1-201ENST00000339950 PPP5CP53041 499 aa11.35□□□□□ -0.59
USP1-201ENST00000339950 GABARAPL2P60520 117 aa11.35□□□□□ -0.59
USP1-201ENST00000339950 GSTM4Q03013 218 aa11.35□□□□□ -0.59
USP1-201ENST00000339950 GPR19Q15760 415 aa11.35□□□□□ -0.59
USP1-201ENST00000339950 DEFB134Q4QY38 66 aa11.35□□□□□ -0.59
USP1-201ENST00000339950 C1QTNF12Q5T7M4 302 aa11.35□□□□□ -0.59
USP1-201ENST00000339950 KDM4DQ6B0I6 523 aa11.35□□□□□ -0.59
USP1-201ENST00000339950 FRMPD2BQ6IN97 320 aa11.35□□□□□ -0.59
USP1-201ENST00000339950 NXPE4Q6UWF7 544 aa11.35□□□□□ -0.59
USP1-201ENST00000339950 GLCCI1Q86VQ1 547 aa11.35□□□□□ -0.59
USP1-201ENST00000339950 MARCH9Q86YJ5 346 aa11.35□□□□□ -0.59
USP1-201ENST00000339950 KLHDC8BQ8IXV7 354 aa11.35□□□□□ -0.59
USP1-201ENST00000339950 TCEAL8Q8IYN2 117 aa11.35□□□□□ -0.59
USP1-201ENST00000339950 METTL4Q8N3J2 472 aa11.35□□□□□ -0.59
USP1-201ENST00000339950 DEFB119Q8N690 84 aa11.35□□□□□ -0.59
USP1-201ENST00000339950 SLAIN1Q8ND83 568 aa11.35□□□□□ -0.59
USP1-201ENST00000339950 KLHL6Q8WZ60 621 aa11.35□□□□□ -0.59
USP1-201ENST00000339950 TADA1Q96BN2 335 aa11.35□□□□□ -0.59
USP1-201ENST00000339950 ALG14Q96F25 216 aa11.35□□□□□ -0.59
USP1-201ENST00000339950 SLC30A2Q9BRI3 323 aa11.35□□□□□ -0.59
USP1-201ENST00000339950 RC3H2Q9HBD1 1191 aaKnown RBP11.35□□□□□ -0.59
USP1-201ENST00000339950 KLHL28Q9NXS3 571 aa11.35□□□□□ -0.59
USP1-201ENST00000339950 BPTFQ12830 3046 aa11.35□□□□□ -0.59
USP1-201ENST00000339950 MED12Q93074 2177 aa11.35□□□□□ -0.59
USP1-201ENST00000339950 A0A1W2PS29 197 aa11.35□□□□□ -0.59
USP1-201ENST00000339950 ABLIM3O94929 683 aa11.35□□□□□ -0.59
USP1-201ENST00000339950 FGBP02675 491 aa11.35□□□□□ -0.59
USP1-201ENST00000339950 HOXA9P31269 272 aa11.35□□□□□ -0.59
USP1-201ENST00000339950 INSL4Q14641 139 aa11.35□□□□□ -0.59
USP1-201ENST00000339950 FAM46CQ5VWP2 391 aa11.35□□□□□ -0.59
USP1-201ENST00000339950 LAIR2Q6ISS4 152 aa11.35□□□□□ -0.59
USP1-201ENST00000339950 PAMR1Q6UXH9 720 aa11.35□□□□□ -0.59
USP1-201ENST00000339950 FAM83HQ6ZRV2 1179 aaPredicted RBP11.35□□□□□ -0.59
USP1-201ENST00000339950 ASCC1Q8N9N2 400 aaKnown RBP11.35□□□□□ -0.59
USP1-201ENST00000339950 SLC38A5Q8WUX1 472 aa11.35□□□□□ -0.59
USP1-201ENST00000339950 ZNF717Q9BY31 904 aaPredicted RBP11.35□□□□□ -0.59
USP1-201ENST00000339950 MED20Q9H944 212 aa11.35□□□□□ -0.59
USP1-201ENST00000339950 SLC23A2Q9UGH3 650 aa11.35□□□□□ -0.59
USP1-201ENST00000339950 CORO2BQ9UQ03 480 aa11.35□□□□□ -0.59
USP1-201ENST00000339950 PCDHGB6Q9Y5F9 930 aa11.35□□□□□ -0.59
USP1-201ENST00000339950 AHCTF1Q8WYP5 2266 aa11.34□□□□□ -0.59
USP1-201ENST00000339950 SBF1O95248 1867 aa11.34□□□□□ -0.59
USP1-201ENST00000339950 STK25O00506 426 aa11.34□□□□□ -0.59
USP1-201ENST00000339950 MID1O15344 667 aa11.34□□□□□ -0.59
USP1-201ENST00000339950 NOS1APO75052 506 aaPredicted RBP11.34□□□□□ -0.59
USP1-201ENST00000339950 C1orf105O95561 183 aa11.34□□□□□ -0.59
USP1-201ENST00000339950 PRNPP04156 253 aa11.34□□□□□ -0.59
USP1-201ENST00000339950 GKN3PP0CG01 181 aa11.34□□□□□ -0.59
USP1-201ENST00000339950 VCANP13611 3396 aa11.34□□□□□ -0.59
USP1-201ENST00000339950 JUNBP17275 347 aaPredicted RBP11.34□□□□□ -0.59
USP1-201ENST00000339950 NT5EP21589 574 aa11.34□□□□□ -0.59
USP1-201ENST00000339950 AK4P27144 223 aaPredicted RBP11.34□□□□□ -0.59
USP1-201ENST00000339950 SDC2P34741 201 aa11.34□□□□□ -0.59
USP1-201ENST00000339950 MICAQ29983 383 aa11.34□□□□□ -0.59
USP1-201ENST00000339950 ZNF311Q5JNZ3 666 aa11.34□□□□□ -0.59
USP1-201ENST00000339950 SERPINA11Q86U17 422 aa11.34□□□□□ -0.59
USP1-201ENST00000339950 C12orf40Q86WS4 652 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms