RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 C16orf58Q96GQ5 468 aa21.13■□□□□ 0.97
PDLIM2-203ENST00000339162 RSPO3Q9BXY4 272 aaPredicted RBP21.13■□□□□ 0.97
PDLIM2-203ENST00000339162 ROGDIQ9GZN7 287 aa21.13■□□□□ 0.97
PDLIM2-203ENST00000339162 A4GALTQ9NPC4 353 aa21.13■□□□□ 0.97
PDLIM2-203ENST00000339162 EQTNQ9NQ60 294 aa21.13■□□□□ 0.97
PDLIM2-203ENST00000339162 SEMA3GQ9NS98 782 aa21.13■□□□□ 0.97
PDLIM2-203ENST00000339162 PNPLA3Q9NST1 481 aa21.13■□□□□ 0.97
PDLIM2-203ENST00000339162 NDUFAF4Q9P032 175 aa21.13■□□□□ 0.97
PDLIM2-203ENST00000339162 LMO7DNF2Z398 122 aa21.13■□□□□ 0.97
PDLIM2-203ENST00000339162 PROS1P07225 676 aa21.13■□□□□ 0.97
PDLIM2-203ENST00000339162 ITGA1P56199 1179 aa21.13■□□□□ 0.97
PDLIM2-203ENST00000339162 FOXD4Q12950 439 aaPredicted RBP21.13■□□□□ 0.97
PDLIM2-203ENST00000339162 IFI44LQ53G44 452 aa21.13■□□□□ 0.97
PDLIM2-203ENST00000339162 NKAIN2Q5VXU1 208 aa21.13■□□□□ 0.97
PDLIM2-203ENST00000339162 PIWIL3Q7Z3Z3 882 aaKnown RBP21.13■□□□□ 0.97
PDLIM2-203ENST00000339162 HIPK1Q86Z02 1210 aa21.13■□□□□ 0.97
PDLIM2-203ENST00000339162 LZICQ8WZA0 190 aa21.13■□□□□ 0.97
PDLIM2-203ENST00000339162 TBC1D20Q96BZ9 403 aa21.13■□□□□ 0.97
PDLIM2-203ENST00000339162 ZNF696Q9H7X3 374 aa21.13■□□□□ 0.97
PDLIM2-203ENST00000339162 CD320Q9NPF0 282 aa21.13■□□□□ 0.97
PDLIM2-203ENST00000339162 PHF11Q9UIL8 331 aa21.13■□□□□ 0.97
PDLIM2-203ENST00000339162 PSME2Q9UL46 239 aa21.13■□□□□ 0.97
PDLIM2-203ENST00000339162 TESMINQ9Y4I5 508 aa21.13■□□□□ 0.97
PDLIM2-203ENST00000339162 VPS13AQ96RL7 3174 aa21.12■□□□□ 0.97
PDLIM2-203ENST00000339162 A0A1B0GVT2 93 aa21.12■□□□□ 0.97
PDLIM2-203ENST00000339162 MITFO75030 526 aaPredicted RBP21.12■□□□□ 0.97
PDLIM2-203ENST00000339162 HPRP00739 348 aa21.12■□□□□ 0.97
PDLIM2-203ENST00000339162 LINGO3P0C6S8 592 aa21.12■□□□□ 0.97
PDLIM2-203ENST00000339162 POLR2IP36954 125 aaKnown RBP21.12■□□□□ 0.97
PDLIM2-203ENST00000339162 PIGAP37287 484 aa21.12■□□□□ 0.97
PDLIM2-203ENST00000339162 CAPZBP47756 277 aa21.12■□□□□ 0.97
PDLIM2-203ENST00000339162 XKP51811 444 aa21.12■□□□□ 0.97
PDLIM2-203ENST00000339162 GALNT5Q7Z7M9 940 aa21.12■□□□□ 0.97
PDLIM2-203ENST00000339162 ZNF655Q8N720 491 aaPredicted RBP21.12■□□□□ 0.97
PDLIM2-203ENST00000339162 ARL10Q8N8L6 244 aa21.12■□□□□ 0.97
PDLIM2-203ENST00000339162 DNASE2BQ8WZ79 361 aa21.12■□□□□ 0.97
PDLIM2-203ENST00000339162 MUS81Q96NY9 551 aa21.12■□□□□ 0.97
PDLIM2-203ENST00000339162 MBOAT4Q96T53 435 aa21.12■□□□□ 0.97
PDLIM2-203ENST00000339162 REEP1Q9H902 201 aa21.12■□□□□ 0.97
PDLIM2-203ENST00000339162 PADI2Q9Y2J8 665 aa21.12■□□□□ 0.97
PDLIM2-203ENST00000339162 SGK494L7N484 410 aa21.12■□□□□ 0.97
PDLIM2-203ENST00000339162 VILLO15195 856 aa21.12■□□□□ 0.97
PDLIM2-203ENST00000339162 SLC28A2O43868 658 aa21.12■□□□□ 0.97
PDLIM2-203ENST00000339162 ALDH4A1P30038 563 aa21.12■□□□□ 0.97
PDLIM2-203ENST00000339162 RRM2P31350 389 aa21.12■□□□□ 0.97
PDLIM2-203ENST00000339162 CLCN2P51788 898 aa21.12■□□□□ 0.97
PDLIM2-203ENST00000339162 AFF3P51826 1226 aaKnown RBP21.12■□□□□ 0.97
PDLIM2-203ENST00000339162 GFERP55789 205 aa21.12■□□□□ 0.97
PDLIM2-203ENST00000339162 IL1RL1Q01638 556 aa21.12■□□□□ 0.97
PDLIM2-203ENST00000339162 WDR53Q7Z5U6 358 aaPredicted RBP21.12■□□□□ 0.97
PDLIM2-203ENST00000339162 HMGN2P46Q86SG4 172 aa21.12■□□□□ 0.97
PDLIM2-203ENST00000339162 CYP4Z1Q86W10 505 aa21.12■□□□□ 0.97
PDLIM2-203ENST00000339162 ZNF786Q8N393 782 aa21.12■□□□□ 0.97
PDLIM2-203ENST00000339162 TMEM52Q8NDY8 209 aa21.12■□□□□ 0.97
PDLIM2-203ENST00000339162 AMBRA1Q9C0C7 1298 aa21.12■□□□□ 0.97
PDLIM2-203ENST00000339162 USE1Q9NZ43 259 aa21.12■□□□□ 0.97
PDLIM2-203ENST00000339162 PDP1Q9P0J1 537 aaPredicted RBP21.12■□□□□ 0.97
PDLIM2-203ENST00000339162 KLHL3Q9UH77 587 aa21.12■□□□□ 0.97
PDLIM2-203ENST00000339162 TMEFF2Q9UIK5 374 aaPredicted RBP21.12■□□□□ 0.97
PDLIM2-203ENST00000339162 SLC22A7Q9Y694 548 aa21.12■□□□□ 0.97
PDLIM2-203ENST00000339162 FAM227AF5H4B4 570 aa21.11■□□□□ 0.97
PDLIM2-203ENST00000339162 J3KTA2 159 aa21.11■□□□□ 0.97
PDLIM2-203ENST00000339162 LDB3O75112 727 aa21.11■□□□□ 0.97
PDLIM2-203ENST00000339162 PIAS2O75928 621 aa21.11■□□□□ 0.97
PDLIM2-203ENST00000339162 SPTBP11277 2137 aa21.11■□□□□ 0.97
PDLIM2-203ENST00000339162 PAX7P23759 505 aa21.11■□□□□ 0.97
PDLIM2-203ENST00000339162 DNAJA1P31689 397 aaKnown RBP21.11■□□□□ 0.97
PDLIM2-203ENST00000339162 BNIP3Q12983 259 aa21.11■□□□□ 0.97
PDLIM2-203ENST00000339162 CEBPEQ15744 281 aa21.11■□□□□ 0.97
PDLIM2-203ENST00000339162 KLHL35Q6PF15 583 aa21.11■□□□□ 0.97
PDLIM2-203ENST00000339162 SIMC1Q8NDZ2 872 aa21.11■□□□□ 0.97
PDLIM2-203ENST00000339162 ELP4Q96EB1 424 aa21.11■□□□□ 0.97
PDLIM2-203ENST00000339162 THUMPD1Q9NXG2 353 aaKnown RBP21.11■□□□□ 0.97
PDLIM2-203ENST00000339162 H6PDO95479 791 aa21.1■□□□□ 0.97
PDLIM2-203ENST00000339162 IFNA14P01570 189 aa21.1■□□□□ 0.97
PDLIM2-203ENST00000339162 ZNF10P21506 573 aaPredicted RBP21.1■□□□□ 0.97
PDLIM2-203ENST00000339162 FUT4P22083 530 aa21.1■□□□□ 0.97
PDLIM2-203ENST00000339162 FNTBP49356 437 aa21.1■□□□□ 0.97
PDLIM2-203ENST00000339162 ARHGDIAP52565 204 aa21.1■□□□□ 0.97
PDLIM2-203ENST00000339162 SHC2P98077 582 aa21.1■□□□□ 0.97
PDLIM2-203ENST00000339162 SRSF5Q13243 272 aaKnown RBP21.1■□□□□ 0.97
PDLIM2-203ENST00000339162 TTC33Q6PID6 262 aaPredicted RBP21.1■□□□□ 0.97
PDLIM2-203ENST00000339162 USP51Q70EK9 711 aa21.1■□□□□ 0.97
PDLIM2-203ENST00000339162 PATL1Q86TB9 770 aaKnown RBP21.1■□□□□ 0.97
PDLIM2-203ENST00000339162 MCATQ8IVS2 390 aaKnown RBP21.1■□□□□ 0.97
PDLIM2-203ENST00000339162 OR52J3Q8NH60 311 aa21.1■□□□□ 0.97
PDLIM2-203ENST00000339162 RMND5BQ96G75 393 aaPredicted RBP21.1■□□□□ 0.97
PDLIM2-203ENST00000339162 TGM7Q96PF1 710 aa21.1■□□□□ 0.97
PDLIM2-203ENST00000339162 DUSP15Q9H1R2 295 aaPredicted RBP21.1■□□□□ 0.97
PDLIM2-203ENST00000339162 ZSCAN32Q9NX65 697 aa21.1■□□□□ 0.97
PDLIM2-203ENST00000339162 IFT80Q9P2H3 777 aaPredicted RBP21.1■□□□□ 0.97
PDLIM2-203ENST00000339162 MYRFQ9Y2G1 1151 aa21.1■□□□□ 0.97
PDLIM2-203ENST00000339162 KCNE3Q9Y6H6 103 aa21.1■□□□□ 0.97
PDLIM2-203ENST00000339162 GALR3O60755 368 aaPredicted RBP21.1■□□□□ 0.97
PDLIM2-203ENST00000339162 MYF5P13349 255 aa21.1■□□□□ 0.97
PDLIM2-203ENST00000339162 TLX1P31314 330 aaPredicted RBP21.1■□□□□ 0.97
PDLIM2-203ENST00000339162 DAPP51397 102 aa21.1■□□□□ 0.97
PDLIM2-203ENST00000339162 KCNAB2Q13303 367 aa21.1■□□□□ 0.97
PDLIM2-203ENST00000339162 FOXB2Q5VYV0 432 aa21.1■□□□□ 0.97
PDLIM2-203ENST00000339162 TMEM64Q6YI46 380 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms