RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 LIX1Q8N485 282 aa14.38□□□□□ -0.11
LINC01116-202ENST00000339037 OR10G3Q8NGC4 313 aa14.38□□□□□ -0.11
LINC01116-202ENST00000339037 NEIL3Q8TAT5 605 aa14.38□□□□□ -0.11
LINC01116-202ENST00000339037 EXT2Q93063 718 aa14.38□□□□□ -0.11
LINC01116-202ENST00000339037 PPWD1Q96BP3 646 aaKnown RBP14.38□□□□□ -0.11
LINC01116-202ENST00000339037 JSRP1Q96MG2 331 aaPredicted RBP14.38□□□□□ -0.11
LINC01116-202ENST00000339037 GAL3ST4Q96RP7 486 aa14.38□□□□□ -0.11
LINC01116-202ENST00000339037 GPR22Q99680 433 aa14.38□□□□□ -0.11
LINC01116-202ENST00000339037 CD244Q9BZW8 370 aa14.38□□□□□ -0.11
LINC01116-202ENST00000339037 SLC6A15Q9H2J7 730 aa14.38□□□□□ -0.11
LINC01116-202ENST00000339037 RPF2Q9H7B2 306 aaKnown RBP14.38□□□□□ -0.11
LINC01116-202ENST00000339037 ACKR4Q9NPB9 350 aa14.38□□□□□ -0.11
LINC01116-202ENST00000339037 QPCTLQ9NXS2 382 aa14.38□□□□□ -0.11
LINC01116-202ENST00000339037 CNIH4Q9P003 139 aa14.38□□□□□ -0.11
LINC01116-202ENST00000339037 FAM159BA6NKW6 160 aa14.37□□□□□ -0.11
LINC01116-202ENST00000339037 SYT5O00445 386 aa14.37□□□□□ -0.11
LINC01116-202ENST00000339037 DVL2O14641 736 aa14.37□□□□□ -0.11
LINC01116-202ENST00000339037 TGFB1P01137 390 aa14.37□□□□□ -0.11
LINC01116-202ENST00000339037 STMN1P16949 149 aa14.37□□□□□ -0.11
LINC01116-202ENST00000339037 DNASE1P24855 282 aa14.37□□□□□ -0.11
LINC01116-202ENST00000339037 SERPINB3P29508 390 aa14.37□□□□□ -0.11
LINC01116-202ENST00000339037 SERPINB1P30740 379 aa14.37□□□□□ -0.11
LINC01116-202ENST00000339037 TRPC1P48995 793 aa14.37□□□□□ -0.11
LINC01116-202ENST00000339037 GPX6P59796 221 aa14.37□□□□□ -0.11
LINC01116-202ENST00000339037 SLAMF1Q13291 335 aa14.37□□□□□ -0.11
LINC01116-202ENST00000339037 BIKQ13323 160 aa14.37□□□□□ -0.11
LINC01116-202ENST00000339037 E2F2Q14209 437 aa14.37□□□□□ -0.11
LINC01116-202ENST00000339037 TRADDQ15628 312 aa14.37□□□□□ -0.11
LINC01116-202ENST00000339037 FLYWCH1Q4VC44 716 aa14.37□□□□□ -0.11
LINC01116-202ENST00000339037 DGAT2L6Q6ZPD8 337 aa14.37□□□□□ -0.11
LINC01116-202ENST00000339037 SEM1Q6ZVN7 128 aa14.37□□□□□ -0.11
LINC01116-202ENST00000339037 SLC29A4Q7RTT9 530 aa14.37□□□□□ -0.11
LINC01116-202ENST00000339037 MAATS1Q7Z4T9 603 aa14.37□□□□□ -0.11
LINC01116-202ENST00000339037 LAS2Q8IYD9 372 aa14.37□□□□□ -0.11
LINC01116-202ENST00000339037 OR7G3Q8NG95 312 aa14.37□□□□□ -0.11
LINC01116-202ENST00000339037 GOT1L1Q8NHS2 421 aaPredicted RBP14.37□□□□□ -0.11
LINC01116-202ENST00000339037 CDKL2Q92772 493 aa14.37□□□□□ -0.11
LINC01116-202ENST00000339037 TANKQ92844 425 aa14.37□□□□□ -0.11
LINC01116-202ENST00000339037 LRRC46Q96FV0 321 aa14.37□□□□□ -0.11
LINC01116-202ENST00000339037 CMTM7Q96FZ5 175 aa14.37□□□□□ -0.11
LINC01116-202ENST00000339037 CPNE1Q99829 537 aa14.37□□□□□ -0.11
LINC01116-202ENST00000339037 DOHHQ9BU89 302 aa14.37□□□□□ -0.11
LINC01116-202ENST00000339037 OR51B5Q9H339 312 aa14.37□□□□□ -0.11
LINC01116-202ENST00000339037 PHF11Q9UIL8 331 aa14.37□□□□□ -0.11
LINC01116-202ENST00000339037 PLEKHA6Q9Y2H5 1048 aa14.37□□□□□ -0.11
LINC01116-202ENST00000339037 CHCHD2Q9Y6H1 151 aaPredicted RBP14.37□□□□□ -0.11
LINC01116-202ENST00000339037 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.37□□□□□ -0.11
LINC01116-202ENST00000339037 C15orf38-AP3S2A0A0A6YYH1 394 aa14.36□□□□□ -0.11
LINC01116-202ENST00000339037 IQANK1A0A1B0GTG1 560 aa14.36□□□□□ -0.11
LINC01116-202ENST00000339037 A6NNC1 897 aa14.36□□□□□ -0.11
LINC01116-202ENST00000339037 ALOX15P16050 662 aaPredicted RBP14.36□□□□□ -0.11
LINC01116-202ENST00000339037 TLX1P31314 330 aaPredicted RBP14.36□□□□□ -0.11
LINC01116-202ENST00000339037 ASCL1P50553 236 aa14.36□□□□□ -0.11
LINC01116-202ENST00000339037 RAP1GDS1P52306 607 aa14.36□□□□□ -0.11
LINC01116-202ENST00000339037 TNFRSF17Q02223 184 aa14.36□□□□□ -0.11
LINC01116-202ENST00000339037 ZKSCAN8Q15776 578 aaPredicted RBP14.36□□□□□ -0.11
LINC01116-202ENST00000339037 ACSF3Q4G176 576 aaPredicted RBP14.36□□□□□ -0.11
LINC01116-202ENST00000339037 OR4C11Q6IEV9 310 aa14.36□□□□□ -0.11
LINC01116-202ENST00000339037 GPR180Q86V85 440 aa14.36□□□□□ -0.11
LINC01116-202ENST00000339037 CDC20BQ86Y33 519 aa14.36□□□□□ -0.11
LINC01116-202ENST00000339037 ST13P4Q8IZP2 240 aaPredicted RBP14.36□□□□□ -0.11
LINC01116-202ENST00000339037 RELL2Q8NC24 303 aaPredicted RBP14.36□□□□□ -0.11
LINC01116-202ENST00000339037 FAM222BQ8WU58 562 aa14.36□□□□□ -0.11
LINC01116-202ENST00000339037 UBXN10Q96LJ8 280 aa14.36□□□□□ -0.11
LINC01116-202ENST00000339037 ALPK1Q96QP1 1244 aa14.36□□□□□ -0.11
LINC01116-202ENST00000339037 SH3GL2Q99962 352 aa14.36□□□□□ -0.11
LINC01116-202ENST00000339037 CENPKQ9BS16 269 aa14.36□□□□□ -0.11
LINC01116-202ENST00000339037 SORBS1Q9BX66 1292 aaKnown RBP14.36□□□□□ -0.11
LINC01116-202ENST00000339037 WWTR1Q9GZV5 400 aa14.36□□□□□ -0.11
LINC01116-202ENST00000339037 PROK2Q9HC23 129 aa14.36□□□□□ -0.11
LINC01116-202ENST00000339037 PROM1O43490 865 aa14.35□□□□□ -0.11
LINC01116-202ENST00000339037 OR10H2O60403 315 aa14.35□□□□□ -0.11
LINC01116-202ENST00000339037 FAM155BO75949 473 aa14.35□□□□□ -0.11
LINC01116-202ENST00000339037 LRATO95237 230 aa14.35□□□□□ -0.11
LINC01116-202ENST00000339037 HOXB4P17483 251 aaPredicted RBP14.35□□□□□ -0.11
LINC01116-202ENST00000339037 GDF1P27539 372 aa14.35□□□□□ -0.11
LINC01116-202ENST00000339037 CASQ1P31415 396 aa14.35□□□□□ -0.11
LINC01116-202ENST00000339037 GP5P40197 560 aa14.35□□□□□ -0.11
LINC01116-202ENST00000339037 BUD31P41223 144 aaPredicted RBP14.35□□□□□ -0.11
LINC01116-202ENST00000339037 DGKQP52824 942 aa14.35□□□□□ -0.11
LINC01116-202ENST00000339037 PLTPP55058 493 aa14.35□□□□□ -0.11
LINC01116-202ENST00000339037 RAB10P61026 200 aa14.35□□□□□ -0.11
LINC01116-202ENST00000339037 HERVK_113P63132 956 aa14.35□□□□□ -0.11
LINC01116-202ENST00000339037 ERVK-8P63133 956 aa14.35□□□□□ -0.11
LINC01116-202ENST00000339037 FOXD4Q12950 439 aaPredicted RBP14.35□□□□□ -0.11
LINC01116-202ENST00000339037 DDX39BQ13838 428 aaKnown RBP14.35□□□□□ -0.11
LINC01116-202ENST00000339037 KBTBD12Q3ZCT8 623 aa14.35□□□□□ -0.11
LINC01116-202ENST00000339037 DEPDC1Q5TB30 811 aa14.35□□□□□ -0.11
LINC01116-202ENST00000339037 C18orf63Q68DL7 685 aa14.35□□□□□ -0.11
LINC01116-202ENST00000339037 ZDHHC24Q6UX98 284 aa14.35□□□□□ -0.11
LINC01116-202ENST00000339037 RNF111Q6ZNA4 994 aa14.35□□□□□ -0.11
LINC01116-202ENST00000339037 C3orf62Q6ZUJ4 267 aa14.35□□□□□ -0.11
LINC01116-202ENST00000339037 CCDC25Q86WR0 208 aa14.35□□□□□ -0.11
LINC01116-202ENST00000339037 CTAGE3PQ8IX95 158 aa14.35□□□□□ -0.11
LINC01116-202ENST00000339037 NAXEQ8NCW5 288 aa14.35□□□□□ -0.11
LINC01116-202ENST00000339037 HUS1BQ8NHY5 278 aa14.35□□□□□ -0.11
LINC01116-202ENST00000339037 STAG3L4Q8TBR4 150 aa14.35□□□□□ -0.11
LINC01116-202ENST00000339037 FBXO25Q8TCJ0 367 aa14.35□□□□□ -0.11
LINC01116-202ENST00000339037 DOK4Q8TEW6 326 aa14.35□□□□□ -0.11
LINC01116-202ENST00000339037 RNASE6Q93091 150 aaKnown RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms