RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 HHATLQ9HCP6 504 aa13.45□□□□□ -0.26
PCDH8-201ENST00000338862 IMP3Q9NV31 184 aaKnown RBP13.45□□□□□ -0.26
PCDH8-201ENST00000338862 TXNL4BQ9NX01 149 aaKnown RBP13.45□□□□□ -0.26
PCDH8-201ENST00000338862 AHSPQ9NZD4 102 aa13.45□□□□□ -0.26
PCDH8-201ENST00000338862 EXTL2Q9UBQ6 330 aa13.45□□□□□ -0.26
PCDH8-201ENST00000338862 CSNK1G3Q9Y6M4 447 aa13.45□□□□□ -0.26
PCDH8-201ENST00000338862 PDPK1O15530 556 aa13.45□□□□□ -0.26
PCDH8-201ENST00000338862 PRKYO43930 277 aa13.45□□□□□ -0.26
PCDH8-201ENST00000338862 PCDH8O95206 1070 aa13.45□□□□□ -0.26
PCDH8-201ENST00000338862 C1SP09871 688 aa13.45□□□□□ -0.26
PCDH8-201ENST00000338862 PEPDP12955 493 aa13.45□□□□□ -0.26
PCDH8-201ENST00000338862 RHCEP18577 417 aa13.45□□□□□ -0.26
PCDH8-201ENST00000338862 ALAS2P22557 587 aa13.45□□□□□ -0.26
PCDH8-201ENST00000338862 PSMB5P28074 263 aa13.45□□□□□ -0.26
PCDH8-201ENST00000338862 HLA-FP30511 346 aa13.45□□□□□ -0.26
PCDH8-201ENST00000338862 GPR4P46093 362 aa13.45□□□□□ -0.26
PCDH8-201ENST00000338862 ZMYND11Q15326 602 aa13.45□□□□□ -0.26
PCDH8-201ENST00000338862 ZNF630Q2M218 657 aaPredicted RBP13.45□□□□□ -0.26
PCDH8-201ENST00000338862 FCRLBQ6BAA4 426 aa13.45□□□□□ -0.26
PCDH8-201ENST00000338862 CCDC116Q8IYX3 515 aa13.45□□□□□ -0.26
PCDH8-201ENST00000338862 OR8J2Q8NGG1 315 aa13.45□□□□□ -0.26
PCDH8-201ENST00000338862 AP3S1Q92572 193 aa13.45□□□□□ -0.26
PCDH8-201ENST00000338862 KLF16Q9BXK1 252 aaPredicted RBP13.45□□□□□ -0.26
PCDH8-201ENST00000338862 RDH14Q9HBH5 336 aa13.45□□□□□ -0.26
PCDH8-201ENST00000338862 NDRG2Q9UN36 371 aaKnown RBP13.45□□□□□ -0.26
PCDH8-201ENST00000338862 SH2B3Q9UQQ2 575 aa13.45□□□□□ -0.26
PCDH8-201ENST00000338862 Q9Y3F1 56 aa13.45□□□□□ -0.26
PCDH8-201ENST00000338862 MYOFQ9NZM1 2061 aa13.45□□□□□ -0.26
PCDH8-201ENST00000338862 MANSC4A6NHS7 340 aaPredicted RBP13.44□□□□□ -0.26
PCDH8-201ENST00000338862 EEF1E1O43324 174 aaKnown RBP13.44□□□□□ -0.26
PCDH8-201ENST00000338862 MPZL2O60487 215 aa13.44□□□□□ -0.26
PCDH8-201ENST00000338862 VNN2O95498 520 aa13.44□□□□□ -0.26
PCDH8-201ENST00000338862 ZNF8P17098 575 aaPredicted RBP13.44□□□□□ -0.26
PCDH8-201ENST00000338862 PRKCAP17252 672 aa13.44□□□□□ -0.26
PCDH8-201ENST00000338862 DRD5P21918 477 aa13.44□□□□□ -0.26
PCDH8-201ENST00000338862 IMPA1P29218 277 aa13.44□□□□□ -0.26
PCDH8-201ENST00000338862 SOX18P35713 384 aa13.44□□□□□ -0.26
PCDH8-201ENST00000338862 CDH11P55287 796 aa13.44□□□□□ -0.26
PCDH8-201ENST00000338862 GPLD1P80108 840 aa13.44□□□□□ -0.26
PCDH8-201ENST00000338862 SEC23BQ15437 767 aa13.44□□□□□ -0.26
PCDH8-201ENST00000338862 C17orf64Q86WR6 236 aa13.44□□□□□ -0.26
PCDH8-201ENST00000338862 VWA5B2Q8N398 1253 aa13.44□□□□□ -0.26
PCDH8-201ENST00000338862 GRPEL2Q8TAA5 225 aa13.44□□□□□ -0.26
PCDH8-201ENST00000338862 CLIP3Q96DZ5 547 aa13.44□□□□□ -0.26
PCDH8-201ENST00000338862 SLC38A2Q96QD8 506 aa13.44□□□□□ -0.26
PCDH8-201ENST00000338862 CLSTN3Q9BQT9 956 aa13.44□□□□□ -0.26
PCDH8-201ENST00000338862 CCDC32Q9BV29 185 aa13.44□□□□□ -0.26
PCDH8-201ENST00000338862 MVB12BQ9H7P6 319 aa13.44□□□□□ -0.26
PCDH8-201ENST00000338862 CXorf36Q9H7Y0 433 aa13.44□□□□□ -0.26
PCDH8-201ENST00000338862 CCDC59Q9P031 241 aaKnown RBP13.44□□□□□ -0.26
PCDH8-201ENST00000338862 WNT6Q9Y6F9 365 aa13.44□□□□□ -0.26
PCDH8-201ENST00000338862 TRIM64BA6NI03 449 aa13.44□□□□□ -0.26
PCDH8-201ENST00000338862 SNTNA6NMZ2 147 aa13.44□□□□□ -0.26
PCDH8-201ENST00000338862 ATF4P18848 351 aaPredicted RBP13.44□□□□□ -0.26
PCDH8-201ENST00000338862 CBLP22681 906 aa13.44□□□□□ -0.26
PCDH8-201ENST00000338862 CTGFP29279 349 aa13.44□□□□□ -0.26
PCDH8-201ENST00000338862 E2F2Q14209 437 aa13.44□□□□□ -0.26
PCDH8-201ENST00000338862 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.44□□□□□ -0.26
PCDH8-201ENST00000338862 OR7G1Q8NGA0 311 aa13.44□□□□□ -0.26
PCDH8-201ENST00000338862 ZNF671Q8TAW3 534 aa13.44□□□□□ -0.26
PCDH8-201ENST00000338862 SLC38A5Q8WUX1 472 aa13.44□□□□□ -0.26
PCDH8-201ENST00000338862 SLC7A6Q92536 515 aa13.44□□□□□ -0.26
PCDH8-201ENST00000338862 MSANTD3Q96H12 275 aa13.44□□□□□ -0.26
PCDH8-201ENST00000338862 SPNS1Q9H2V7 528 aa13.44□□□□□ -0.26
PCDH8-201ENST00000338862 BTNL2Q9UIR0 455 aa13.44□□□□□ -0.26
PCDH8-201ENST00000338862 ALG5Q9Y673 324 aa13.44□□□□□ -0.26
PCDH8-201ENST00000338862 PDCD11Q14690 1871 aaKnown RBP13.44□□□□□ -0.26
PCDH8-201ENST00000338862 MMP20O60882 483 aa13.44□□□□□ -0.26
PCDH8-201ENST00000338862 CYBAP13498 195 aa13.44□□□□□ -0.26
PCDH8-201ENST00000338862 OSMP13725 252 aa13.44□□□□□ -0.26
PCDH8-201ENST00000338862 SELPP16109 830 aa13.44□□□□□ -0.26
PCDH8-201ENST00000338862 HMGA1P17096 107 aaKnown RBP13.44□□□□□ -0.26
PCDH8-201ENST00000338862 HOXB6P17509 224 aaKnown RBP13.44□□□□□ -0.26
PCDH8-201ENST00000338862 ETV5P41161 510 aa13.44□□□□□ -0.26
PCDH8-201ENST00000338862 ETV1P50549 477 aa13.44□□□□□ -0.26
PCDH8-201ENST00000338862 NCBP2P52298 156 aaKnown RBP eCLIP13.44□□□□□ -0.26
PCDH8-201ENST00000338862 FGFBP1Q14512 234 aa13.44□□□□□ -0.26
PCDH8-201ENST00000338862 IFNL1Q8IU54 200 aa13.44□□□□□ -0.26
PCDH8-201ENST00000338862 SAMD12Q8N8I0 201 aa13.44□□□□□ -0.26
PCDH8-201ENST00000338862 RASGEF1AQ8N9B8 481 aa13.44□□□□□ -0.26
PCDH8-201ENST00000338862 OR8J1Q8NGP2 316 aa13.44□□□□□ -0.26
PCDH8-201ENST00000338862 SMAP2Q8WU79 429 aaPredicted RBP13.44□□□□□ -0.26
PCDH8-201ENST00000338862 FATE1Q969F0 183 aa13.44□□□□□ -0.26
PCDH8-201ENST00000338862 SECISBP2Q96T21 854 aaKnown RBP13.44□□□□□ -0.26
PCDH8-201ENST00000338862 GAL3ST1Q99999 423 aa13.44□□□□□ -0.26
PCDH8-201ENST00000338862 TMEM45AQ9NWC5 275 aa13.44□□□□□ -0.26
PCDH8-201ENST00000338862 EIF3KQ9UBQ5 218 aaKnown RBP13.44□□□□□ -0.26
PCDH8-201ENST00000338862 FAM170BA6NMN3 283 aa13.43□□□□□ -0.26
PCDH8-201ENST00000338862 HRO43593 1189 aa13.43□□□□□ -0.26
PCDH8-201ENST00000338862 ORC5O43913 435 aa13.43□□□□□ -0.26
PCDH8-201ENST00000338862 ICMTO60725 284 aa13.43□□□□□ -0.26
PCDH8-201ENST00000338862 POP7O75817 140 aaKnown RBP13.43□□□□□ -0.26
PCDH8-201ENST00000338862 CRYZL1O95825 349 aa13.43□□□□□ -0.26
PCDH8-201ENST00000338862 FCHO2Q0JRZ9 810 aa13.43□□□□□ -0.26
PCDH8-201ENST00000338862 ZNF750Q32MQ0 723 aa13.43□□□□□ -0.26
PCDH8-201ENST00000338862 L3MBTL4Q8NA19 623 aa13.43□□□□□ -0.26
PCDH8-201ENST00000338862 FAM46AQ96IP4 442 aaKnown RBP13.43□□□□□ -0.26
PCDH8-201ENST00000338862 PRELID1Q9Y255 219 aa13.43□□□□□ -0.26
PCDH8-201ENST00000338862 HMX3A6NHT5 357 aa13.43□□□□□ -0.26
PCDH8-201ENST00000338862 SMAD9O15198 467 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms