RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 YTHDF3Q7Z739 585 aaKnown RBP20.16■□□□□ 0.82
TPM1-204ENST00000334895 DHDDSQ86SQ9 333 aa20.16■□□□□ 0.82
TPM1-204ENST00000334895 LRRC25Q8N386 305 aaPredicted RBP20.16■□□□□ 0.82
TPM1-204ENST00000334895 PCYOX1LQ8NBM8 494 aa20.16■□□□□ 0.82
TPM1-204ENST00000334895 OR4A15Q8NGL6 344 aa20.16■□□□□ 0.82
TPM1-204ENST00000334895 OR5P2Q8WZ92 322 aa20.16■□□□□ 0.82
TPM1-204ENST00000334895 PTCHD1Q96NR3 888 aa20.16■□□□□ 0.82
TPM1-204ENST00000334895 PANX1Q96RD7 426 aa20.16■□□□□ 0.82
TPM1-204ENST00000334895 SOX17Q9H6I2 414 aaPredicted RBP20.16■□□□□ 0.82
TPM1-204ENST00000334895 SIRT3Q9NTG7 399 aaPredicted RBP20.16■□□□□ 0.82
TPM1-204ENST00000334895 C14orf105Q9NVL8 296 aa20.16■□□□□ 0.82
TPM1-204ENST00000334895 TAS2R1Q9NYW7 299 aa20.16■□□□□ 0.82
TPM1-204ENST00000334895 PADI1Q9ULC6 663 aa20.16■□□□□ 0.82
TPM1-204ENST00000334895 A0A096LPI6 279 aa20.16■□□□□ 0.82
TPM1-204ENST00000334895 C1QCP02747 245 aa20.16■□□□□ 0.82
TPM1-204ENST00000334895 ABCB1P08183 1280 aaPredicted RBP20.16■□□□□ 0.82
TPM1-204ENST00000334895 PORP16435 677 aaPredicted RBP20.16■□□□□ 0.82
TPM1-204ENST00000334895 TRPC1P48995 793 aa20.16■□□□□ 0.82
TPM1-204ENST00000334895 GAB1Q13480 694 aa20.16■□□□□ 0.82
TPM1-204ENST00000334895 CAPRIN1Q14444 709 aaKnown RBP20.16■□□□□ 0.82
TPM1-204ENST00000334895 NCF4Q15080 339 aa20.16■□□□□ 0.82
TPM1-204ENST00000334895 LTB4RQ15722 352 aa20.16■□□□□ 0.82
TPM1-204ENST00000334895 MFSD4BQ5TF39 518 aa20.16■□□□□ 0.82
TPM1-204ENST00000334895 FAM69BQ5VUD6 431 aa20.16■□□□□ 0.82
TPM1-204ENST00000334895 HACD2Q6Y1H2 254 aa20.16■□□□□ 0.82
TPM1-204ENST00000334895 DGAT2L6Q6ZPD8 337 aa20.16■□□□□ 0.82
TPM1-204ENST00000334895 SAMD14Q8IZD0 417 aaPredicted RBP20.16■□□□□ 0.82
TPM1-204ENST00000334895 OR9A2Q8NGT5 310 aa20.16■□□□□ 0.82
TPM1-204ENST00000334895 PSMA8Q8TAA3 256 aa20.16■□□□□ 0.82
TPM1-204ENST00000334895 LRRC58Q96CX6 371 aa20.16■□□□□ 0.82
TPM1-204ENST00000334895 ALOXE3Q9BYJ1 711 aa20.16■□□□□ 0.82
TPM1-204ENST00000334895 CXorf36Q9H7Y0 433 aa20.16■□□□□ 0.82
TPM1-204ENST00000334895 TAS2R9Q9NYW1 312 aa20.16■□□□□ 0.82
TPM1-204ENST00000334895 VAPAQ9P0L0 249 aa20.16■□□□□ 0.82
TPM1-204ENST00000334895 MKL2Q9ULH7 1088 aa20.16■□□□□ 0.82
TPM1-204ENST00000334895 ATP5HO75947 161 aa20.15■□□□□ 0.82
TPM1-204ENST00000334895 KCNH1O95259 989 aa20.15■□□□□ 0.82
TPM1-204ENST00000334895 ATP1B1P05026 303 aa20.15■□□□□ 0.82
TPM1-204ENST00000334895 RBMS1P29558 406 aaKnown RBP20.15■□□□□ 0.82
TPM1-204ENST00000334895 LRRC74AQ0VAA2 488 aa20.15■□□□□ 0.82
TPM1-204ENST00000334895 STX4Q12846 297 aa20.15■□□□□ 0.82
TPM1-204ENST00000334895 ART3Q13508 389 aa20.15■□□□□ 0.82
TPM1-204ENST00000334895 MAP7Q14244 749 aa20.15■□□□□ 0.82
TPM1-204ENST00000334895 PPWD1Q96BP3 646 aaKnown RBP20.15■□□□□ 0.82
TPM1-204ENST00000334895 ROPN1LQ96C74 230 aa20.15■□□□□ 0.82
TPM1-204ENST00000334895 GPATCH1Q9BRR8 931 aaKnown RBP20.15■□□□□ 0.82
TPM1-204ENST00000334895 NRSN2Q9GZP1 204 aa20.15■□□□□ 0.82
TPM1-204ENST00000334895 WDR54Q9H977 334 aa20.15■□□□□ 0.82
TPM1-204ENST00000334895 ANGPTL2Q9UKU9 493 aa20.15■□□□□ 0.82
TPM1-204ENST00000334895 PCDHB14Q9Y5E9 798 aa20.15■□□□□ 0.82
TPM1-204ENST00000334895 C9J4A7 227 aa20.14■□□□□ 0.81
TPM1-204ENST00000334895 ERN1O75460 977 aaKnown RBP20.14■□□□□ 0.81
TPM1-204ENST00000334895 KLF7O75840 302 aaPredicted RBP20.14■□□□□ 0.81
TPM1-204ENST00000334895 SLC35E2P0CK97 266 aa20.14■□□□□ 0.81
TPM1-204ENST00000334895 MPIP34949 423 aa20.14■□□□□ 0.81
TPM1-204ENST00000334895 CLEC4FQ8N1N0 589 aa20.14■□□□□ 0.81
TPM1-204ENST00000334895 PLPP5Q8NEB5 264 aa20.14■□□□□ 0.81
TPM1-204ENST00000334895 ADCY4Q8NFM4 1077 aa20.14■□□□□ 0.81
TPM1-204ENST00000334895 ZFP28Q8NHY6 868 aa20.14■□□□□ 0.81
TPM1-204ENST00000334895 CT55Q8WUE5 264 aa20.14■□□□□ 0.81
TPM1-204ENST00000334895 PHF12Q96QT6 1004 aa20.14■□□□□ 0.81
TPM1-204ENST00000334895 CGREF1Q99674 301 aa20.14■□□□□ 0.81
TPM1-204ENST00000334895 TRIM8Q9BZR9 551 aa20.14■□□□□ 0.81
TPM1-204ENST00000334895 GPN3Q9UHW5 284 aaPredicted RBP20.14■□□□□ 0.81
TPM1-204ENST00000334895 ASPMQ8IZT6 3477 aa20.14■□□□□ 0.81
TPM1-204ENST00000334895 TCRBV16S1A1N1A0A5B0 115 aa20.13■□□□□ 0.81
TPM1-204ENST00000334895 IDSB3KWA1 339 aa20.13■□□□□ 0.81
TPM1-204ENST00000334895 HNRNPCL1O60812 293 aaKnown RBP20.13■□□□□ 0.81
TPM1-204ENST00000334895 DXOO77932 396 aaKnown RBP20.13■□□□□ 0.81
TPM1-204ENST00000334895 KRT16P08779 473 aa20.13■□□□□ 0.81
TPM1-204ENST00000334895 CCNYL3P0C7X3 344 aa20.13■□□□□ 0.81
TPM1-204ENST00000334895 MXRA7P84157 204 aa20.13■□□□□ 0.81
TPM1-204ENST00000334895 MGAT2Q10469 447 aa20.13■□□□□ 0.81
TPM1-204ENST00000334895 RTP5Q14D33 572 aa20.13■□□□□ 0.81
TPM1-204ENST00000334895 ST13P4Q8IZP2 240 aaPredicted RBP20.13■□□□□ 0.81
TPM1-204ENST00000334895 ESX1Q8N693 406 aa20.13■□□□□ 0.81
TPM1-204ENST00000334895 DOK4Q8TEW6 326 aa20.13■□□□□ 0.81
TPM1-204ENST00000334895 AURKBQ96GD4 344 aaPredicted RBP20.13■□□□□ 0.81
TPM1-204ENST00000334895 MESP1Q9BRJ9 268 aa20.13■□□□□ 0.81
TPM1-204ENST00000334895 C1orf21Q9H246 121 aa20.13■□□□□ 0.81
TPM1-204ENST00000334895 NEUROD4Q9HD90 331 aa20.13■□□□□ 0.81
TPM1-204ENST00000334895 GID8Q9NWU2 228 aa20.13■□□□□ 0.81
TPM1-204ENST00000334895 PCDHGB4Q9UN71 923 aa20.13■□□□□ 0.81
TPM1-204ENST00000334895 MSRB2Q9Y3D2 182 aa20.13■□□□□ 0.81
TPM1-204ENST00000334895 IQCJ-SCHIP1C9J366 451 aaPredicted RBP20.13■□□□□ 0.81
TPM1-204ENST00000334895 RAD1O60671 282 aa20.13■□□□□ 0.81
TPM1-204ENST00000334895 NPPAP01160 153 aa20.13■□□□□ 0.81
TPM1-204ENST00000334895 ZCCHC18P0CG32 403 aa20.13■□□□□ 0.81
TPM1-204ENST00000334895 PTPN4P29074 926 aa20.13■□□□□ 0.81
TPM1-204ENST00000334895 STT3AP46977 705 aa20.13■□□□□ 0.81
TPM1-204ENST00000334895 ZNF628Q5EBL2 1059 aa20.13■□□□□ 0.81
TPM1-204ENST00000334895 ZNF621Q6ZSS3 439 aa20.13■□□□□ 0.81
TPM1-204ENST00000334895 NLGN4XQ8N0W4 816 aa20.13■□□□□ 0.81
TPM1-204ENST00000334895 ENDOVQ8N8Q3 282 aaKnown RBP20.13■□□□□ 0.81
TPM1-204ENST00000334895 NLGN4YQ8NFZ3 816 aaPredicted RBP20.13■□□□□ 0.81
TPM1-204ENST00000334895 DNAJB8Q8NHS0 232 aa20.13■□□□□ 0.81
TPM1-204ENST00000334895 C3orf18Q9UK00 162 aa20.13■□□□□ 0.81
TPM1-204ENST00000334895 CROTQ9UKG9 612 aa20.13■□□□□ 0.81
TPM1-204ENST00000334895 NXT1Q9UKK6 140 aaKnown RBP20.13■□□□□ 0.81
TPM1-204ENST00000334895 ACSL6Q9UKU0 697 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms