RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 PDXPQ96GD0 296 aa11.69□□□□□ -0.54
VPS33B-201ENST00000333371 ZSWIM3Q96MP5 696 aa11.69□□□□□ -0.54
VPS33B-201ENST00000333371 PRR14Q9BWN1 585 aa11.69□□□□□ -0.54
VPS33B-201ENST00000333371 TSSK6Q9BXA6 273 aa11.69□□□□□ -0.54
VPS33B-201ENST00000333371 SERHL2Q9H4I8 314 aa11.69□□□□□ -0.54
VPS33B-201ENST00000333371 KCNK12Q9HB15 430 aa11.69□□□□□ -0.54
VPS33B-201ENST00000333371 CCDC177Q9NQR7 707 aaPredicted RBP11.69□□□□□ -0.54
VPS33B-201ENST00000333371 TMCC3Q9ULS5 477 aa11.69□□□□□ -0.54
VPS33B-201ENST00000333371 TMEM98Q9Y2Y6 226 aa11.69□□□□□ -0.54
VPS33B-201ENST00000333371 AP1M2Q9Y6Q5 423 aa11.69□□□□□ -0.54
VPS33B-201ENST00000333371 TLX2O43763 284 aaPredicted RBP11.68□□□□□ -0.54
VPS33B-201ENST00000333371 PRKYO43930 277 aa11.68□□□□□ -0.54
VPS33B-201ENST00000333371 SLITRK5O94991 958 aa11.68□□□□□ -0.54
VPS33B-201ENST00000333371 ALPPL2P10696 532 aa11.68□□□□□ -0.54
VPS33B-201ENST00000333371 UQCRC2P22695 453 aa11.68□□□□□ -0.54
VPS33B-201ENST00000333371 SSTR4P31391 388 aa11.68□□□□□ -0.54
VPS33B-201ENST00000333371 HTR3AP46098 478 aa11.68□□□□□ -0.54
VPS33B-201ENST00000333371 TEKQ02763 1124 aa11.68□□□□□ -0.54
VPS33B-201ENST00000333371 ZNF77Q15935 545 aa11.68□□□□□ -0.54
VPS33B-201ENST00000333371 DCST1Q5T197 706 aa11.68□□□□□ -0.54
VPS33B-201ENST00000333371 RAET1GQ6H3X3 334 aa11.68□□□□□ -0.54
VPS33B-201ENST00000333371 SLC9B2Q86UD5 537 aa11.68□□□□□ -0.54
VPS33B-201ENST00000333371 ANKRD53Q8N9V6 530 aa11.68□□□□□ -0.54
VPS33B-201ENST00000333371 OR6F1Q8NGZ6 308 aa11.68□□□□□ -0.54
VPS33B-201ENST00000333371 ZNF717Q9BY31 904 aaPredicted RBP11.68□□□□□ -0.54
VPS33B-201ENST00000333371 POLR2J3Q9H1A7 115 aaKnown RBP11.68□□□□□ -0.54
VPS33B-201ENST00000333371 SEMA3GQ9NS98 782 aa11.68□□□□□ -0.54
VPS33B-201ENST00000333371 DDX28Q9NUL7 540 aaKnown RBP11.68□□□□□ -0.54
VPS33B-201ENST00000333371 ASF1AQ9Y294 204 aa11.68□□□□□ -0.54
VPS33B-201ENST00000333371 RANBP2P49792 3224 aaKnown RBP11.68□□□□□ -0.54
VPS33B-201ENST00000333371 VCANP13611 3396 aa11.68□□□□□ -0.54
VPS33B-201ENST00000333371 A8MVJ9 347 aa11.68□□□□□ -0.54
VPS33B-201ENST00000333371 QSOX1O00391 747 aa11.68□□□□□ -0.54
VPS33B-201ENST00000333371 HMGN4O00479 90 aa11.68□□□□□ -0.54
VPS33B-201ENST00000333371 PRKRAO75569 313 aaKnown RBP11.68□□□□□ -0.54
VPS33B-201ENST00000333371 POP7O75817 140 aaKnown RBP11.68□□□□□ -0.54
VPS33B-201ENST00000333371 CSTF2P33240 577 aaKnown RBP eCLIP11.68□□□□□ -0.54
VPS33B-201ENST00000333371 RACK1P63244 317 aaKnown RBP11.68□□□□□ -0.54
VPS33B-201ENST00000333371 TIMM50Q3ZCQ8 353 aa11.68□□□□□ -0.54
VPS33B-201ENST00000333371 TMEM240Q5SV17 173 aa11.68□□□□□ -0.54
VPS33B-201ENST00000333371 PRAMEF14Q5SWL7 426 aa11.68□□□□□ -0.54
VPS33B-201ENST00000333371 PRAMEF13Q5VWM6 474 aa11.68□□□□□ -0.54
VPS33B-201ENST00000333371 PGBD2Q6P3X8 592 aa11.68□□□□□ -0.54
VPS33B-201ENST00000333371 C6orf120Q7Z4R8 191 aa11.68□□□□□ -0.54
VPS33B-201ENST00000333371 KLHL6Q8WZ60 621 aa11.68□□□□□ -0.54
VPS33B-201ENST00000333371 PIK3R3Q92569 461 aa11.68□□□□□ -0.54
VPS33B-201ENST00000333371 TP53INP1Q96A56 240 aa11.68□□□□□ -0.54
VPS33B-201ENST00000333371 TMEM80Q96HE8 168 aa11.68□□□□□ -0.54
VPS33B-201ENST00000333371 GPA33Q99795 319 aa11.68□□□□□ -0.54
VPS33B-201ENST00000333371 TAC3Q9UHF0 121 aa11.68□□□□□ -0.54
VPS33B-201ENST00000333371 WBP11Q9Y2W2 641 aaKnown RBP11.68□□□□□ -0.54
VPS33B-201ENST00000333371 TRPM6Q9BX84 2022 aa11.68□□□□□ -0.54
VPS33B-201ENST00000333371 A0A1W2PQ09 198 aa11.67□□□□□ -0.54
VPS33B-201ENST00000333371 MMP20O60882 483 aa11.67□□□□□ -0.54
VPS33B-201ENST00000333371 NME6O75414 186 aaPredicted RBP11.67□□□□□ -0.54
VPS33B-201ENST00000333371 SEMA3DO95025 777 aa11.67□□□□□ -0.54
VPS33B-201ENST00000333371 CDRT1O95170 752 aa11.67□□□□□ -0.54
VPS33B-201ENST00000333371 TP53P04637 393 aaPredicted RBP11.67□□□□□ -0.54
VPS33B-201ENST00000333371 MAPK12P53778 367 aa11.67□□□□□ -0.54
VPS33B-201ENST00000333371 CAV3P56539 151 aa11.67□□□□□ -0.54
VPS33B-201ENST00000333371 SLAMF1Q13291 335 aa11.67□□□□□ -0.54
VPS33B-201ENST00000333371 SPDYE7PQ495Y7 208 aa11.67□□□□□ -0.54
VPS33B-201ENST00000333371 TCEAL5Q5H9L2 206 aa11.67□□□□□ -0.54
VPS33B-201ENST00000333371 PSRC1Q6PGN9 363 aaPredicted RBP11.67□□□□□ -0.54
VPS33B-201ENST00000333371 CASP12Q6UXS9 341 aa11.67□□□□□ -0.54
VPS33B-201ENST00000333371 TMPRSS11AQ6ZMR5 421 aa11.67□□□□□ -0.54
VPS33B-201ENST00000333371 SHFQ7M4L6 423 aa11.67□□□□□ -0.54
VPS33B-201ENST00000333371 UBQLNLQ8IYU4 475 aa11.67□□□□□ -0.54
VPS33B-201ENST00000333371 SYT14Q8NB59 555 aa11.67□□□□□ -0.54
VPS33B-201ENST00000333371 OR9Q1Q8NGQ5 310 aa11.67□□□□□ -0.54
VPS33B-201ENST00000333371 WDR34Q96EX3 536 aa11.67□□□□□ -0.54
VPS33B-201ENST00000333371 YIPF4Q9BSR8 244 aa11.67□□□□□ -0.54
VPS33B-201ENST00000333371 BEX2Q9BXY8 128 aa11.67□□□□□ -0.54
VPS33B-201ENST00000333371 ZDHHC5Q9C0B5 715 aa11.67□□□□□ -0.54
VPS33B-201ENST00000333371 FZD3Q9NPG1 666 aa11.67□□□□□ -0.54
VPS33B-201ENST00000333371 TM7SF3Q9NS93 570 aa11.67□□□□□ -0.54
VPS33B-201ENST00000333371 TEX10Q9NXF1 929 aaPredicted RBP11.67□□□□□ -0.54
VPS33B-201ENST00000333371 ADAP00813 363 aa11.67□□□□□ -0.54
VPS33B-201ENST00000333371 KRT8P05787 483 aa11.67□□□□□ -0.54
VPS33B-201ENST00000333371 H1F0P07305 194 aaKnown RBP11.67□□□□□ -0.54
VPS33B-201ENST00000333371 OR12D1P0DN82 309 aa11.67□□□□□ -0.54
VPS33B-201ENST00000333371 CD72P21854 359 aa11.67□□□□□ -0.54
VPS33B-201ENST00000333371 ETV5P41161 510 aa11.67□□□□□ -0.54
VPS33B-201ENST00000333371 ETV1P50549 477 aa11.67□□□□□ -0.54
VPS33B-201ENST00000333371 ELOAQ14241 798 aaKnown RBP11.67□□□□□ -0.54
VPS33B-201ENST00000333371 ARMC4Q5T2S8 1044 aa11.67□□□□□ -0.54
VPS33B-201ENST00000333371 OR2G6Q5TZ20 316 aa11.67□□□□□ -0.54
VPS33B-201ENST00000333371 SLX4IPQ5VYV7 408 aa11.67□□□□□ -0.54
VPS33B-201ENST00000333371 C22orf42Q6IC83 251 aa11.67□□□□□ -0.54
VPS33B-201ENST00000333371 ACSM5Q6NUN0 579 aa11.67□□□□□ -0.54
VPS33B-201ENST00000333371 RTL10Q7L3V2 364 aa11.67□□□□□ -0.54
VPS33B-201ENST00000333371 C11orf96Q7Z7L8 435 aa11.67□□□□□ -0.54
VPS33B-201ENST00000333371 C12orf40Q86WS4 652 aa11.67□□□□□ -0.54
VPS33B-201ENST00000333371 SP7Q8TDD2 431 aaPredicted RBP11.67□□□□□ -0.54
VPS33B-201ENST00000333371 TM4SF18Q96CE8 201 aa11.67□□□□□ -0.54
VPS33B-201ENST00000333371 DTD2Q96FN9 168 aa11.67□□□□□ -0.54
VPS33B-201ENST00000333371 ABCB9Q9NP78 766 aa11.67□□□□□ -0.54
VPS33B-201ENST00000333371 DYRK4Q9NR20 520 aa11.67□□□□□ -0.54
VPS33B-201ENST00000333371 SIRT3Q9NTG7 399 aaPredicted RBP11.67□□□□□ -0.54
VPS33B-201ENST00000333371 SPATA7Q9P0W8 599 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms