RNA–Protein interactions for RNA: ENST00000332814.6

C11orf88-201, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS P4 TSL 5 BASIC

Gene C11orf88, Length 795 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-201ENST00000332814 CCT7Q99832 543 aa15.25■□□□□ 0.03
C11orf88-201ENST00000332814 ANKRD10Q9NXR5 420 aa15.25■□□□□ 0.03
C11orf88-201ENST00000332814 ERVK-19Q9WJR5 959 aa15.25■□□□□ 0.03
C11orf88-201ENST00000332814 WBP11Q9Y2W2 641 aaKnown RBP15.25■□□□□ 0.03
C11orf88-201ENST00000332814 PCDHGA10Q9Y5H3 936 aa15.25■□□□□ 0.03
C11orf88-201ENST00000332814 ATMQ13315 3056 aa15.25■□□□□ 0.03
C11orf88-201ENST00000332814 MAN1A2O60476 641 aa15.24■□□□□ 0.03
C11orf88-201ENST00000332814 PRAMEF2O60811 474 aa15.24■□□□□ 0.03
C11orf88-201ENST00000332814 LYPLA1O75608 230 aaPredicted RBP15.24■□□□□ 0.03
C11orf88-201ENST00000332814 DDAH2O95865 285 aa15.24■□□□□ 0.03
C11orf88-201ENST00000332814 CD46P15529 392 aa15.24■□□□□ 0.03
C11orf88-201ENST00000332814 H2AFXP16104 143 aaPredicted RBP15.24■□□□□ 0.03
C11orf88-201ENST00000332814 MAPK1P28482 360 aa15.24■□□□□ 0.03
C11orf88-201ENST00000332814 FEN1P39748 380 aaKnown RBP15.24■□□□□ 0.03
C11orf88-201ENST00000332814 SLC1A6P48664 564 aa15.24■□□□□ 0.03
C11orf88-201ENST00000332814 CYB561P49447 251 aa15.24■□□□□ 0.03
C11orf88-201ENST00000332814 SSR4P51571 173 aa15.24■□□□□ 0.03
C11orf88-201ENST00000332814 GPR143P51810 404 aa15.24■□□□□ 0.03
C11orf88-201ENST00000332814 SLC18A1P54219 525 aa15.24■□□□□ 0.03
C11orf88-201ENST00000332814 C2orf80Q0P641 193 aa15.24■□□□□ 0.03
C11orf88-201ENST00000332814 MPP2Q14168 576 aa15.24■□□□□ 0.03
C11orf88-201ENST00000332814 OR1C1Q15619 314 aa15.24■□□□□ 0.03
C11orf88-201ENST00000332814 INPP5JQ15735 1006 aaPredicted RBP15.24■□□□□ 0.03
C11orf88-201ENST00000332814 NOXRED1Q6NXP6 359 aa15.24■□□□□ 0.03
C11orf88-201ENST00000332814 FAM180AQ6UWF9 173 aa15.24■□□□□ 0.03
C11orf88-201ENST00000332814 IKBIPQ70UQ0 350 aa15.24■□□□□ 0.03
C11orf88-201ENST00000332814 TRIM42Q8IWZ5 723 aa15.24■□□□□ 0.03
C11orf88-201ENST00000332814 MMP21Q8N119 569 aa15.24■□□□□ 0.03
C11orf88-201ENST00000332814 OR6Y1Q8NGX8 325 aa15.24■□□□□ 0.03
C11orf88-201ENST00000332814 OR8K3Q8NH51 312 aa15.24■□□□□ 0.03
C11orf88-201ENST00000332814 ZNF721Q8TF20 911 aa15.24■□□□□ 0.03
C11orf88-201ENST00000332814 EXOSC8Q96B26 276 aaKnown RBP15.24■□□□□ 0.03
C11orf88-201ENST00000332814 ATP6V1G3Q96LB4 118 aa15.24■□□□□ 0.03
C11orf88-201ENST00000332814 NPAS2Q99743 824 aa15.24■□□□□ 0.03
C11orf88-201ENST00000332814 BRINP2Q9C0B6 783 aa15.24■□□□□ 0.03
C11orf88-201ENST00000332814 ACBD3Q9H3P7 528 aa15.24■□□□□ 0.03
C11orf88-201ENST00000332814 MYNNQ9NPC7 610 aa15.24■□□□□ 0.03
C11orf88-201ENST00000332814 AGPAT4Q9NRZ5 378 aa15.24■□□□□ 0.03
C11orf88-201ENST00000332814 LRFN1Q9P244 771 aa15.24■□□□□ 0.03
C11orf88-201ENST00000332814 ZDHHC2Q9UIJ5 367 aa15.24■□□□□ 0.03
C11orf88-201ENST00000332814 ZNF223Q9UK11 482 aaPredicted RBP15.24■□□□□ 0.03
C11orf88-201ENST00000332814 TMED5Q9Y3A6 229 aa15.24■□□□□ 0.03
C11orf88-201ENST00000332814 COPG1Q9Y678 874 aaKnown RBP15.24■□□□□ 0.03
C11orf88-201ENST00000332814 NPIPB8E9PQR5 432 aa15.23■□□□□ 0.03
C11orf88-201ENST00000332814 VPS4BO75351 444 aa15.23■□□□□ 0.03
C11orf88-201ENST00000332814 ITGA10O75578 1167 aa15.23■□□□□ 0.03
C11orf88-201ENST00000332814 CD96P40200 585 aa15.23■□□□□ 0.03
C11orf88-201ENST00000332814 RNF4P78317 190 aa15.23■□□□□ 0.03
C11orf88-201ENST00000332814 INAQ16352 499 aa15.23■□□□□ 0.03
C11orf88-201ENST00000332814 ATP6AP1LQ52LC2 224 aa15.23■□□□□ 0.03
C11orf88-201ENST00000332814 ZNF766Q5HY98 468 aa15.23■□□□□ 0.03
C11orf88-201ENST00000332814 HLA-DQA1Q5Y7H0 255 aa15.23■□□□□ 0.03
C11orf88-201ENST00000332814 DGAT2L6Q6ZPD8 337 aa15.23■□□□□ 0.03
C11orf88-201ENST00000332814 LRRC25Q8N386 305 aaPredicted RBP15.23■□□□□ 0.03
C11orf88-201ENST00000332814 CISD2Q8N5K1 135 aaKnown RBP15.23■□□□□ 0.03
C11orf88-201ENST00000332814 ZNF321PQ8N8H1 164 aa15.23■□□□□ 0.03
C11orf88-201ENST00000332814 TMEM178AQ8NBL3 297 aa15.23■□□□□ 0.03
C11orf88-201ENST00000332814 OR2T11Q8NH01 316 aa15.23■□□□□ 0.03
C11orf88-201ENST00000332814 DOK4Q8TEW6 326 aa15.23■□□□□ 0.03
C11orf88-201ENST00000332814 ASB15Q8WXK1 588 aa15.23■□□□□ 0.03
C11orf88-201ENST00000332814 TMEM125Q96AQ2 219 aa15.23■□□□□ 0.03
C11orf88-201ENST00000332814 GAL3ST4Q96RP7 486 aa15.23■□□□□ 0.03
C11orf88-201ENST00000332814 TUBB1Q9H4B7 451 aa15.23■□□□□ 0.03
C11orf88-201ENST00000332814 VIPAS39Q9H9C1 493 aa15.23■□□□□ 0.03
C11orf88-201ENST00000332814 EHD3Q9NZN3 535 aa15.23■□□□□ 0.03
C11orf88-201ENST00000332814 HEY2Q9UBP5 337 aa15.23■□□□□ 0.03
C11orf88-201ENST00000332814 CES1P1Q9UKY3 287 aa15.23■□□□□ 0.03
C11orf88-201ENST00000332814 VPS4AQ9UN37 437 aa15.23■□□□□ 0.03
C11orf88-201ENST00000332814 ERVK-11Q9UQG0 969 aa15.23■□□□□ 0.03
C11orf88-201ENST00000332814 YARS2Q9Y2Z4 477 aaKnown RBP15.23■□□□□ 0.03
C11orf88-201ENST00000332814 RAP2CQ9Y3L5 183 aa15.23■□□□□ 0.03
C11orf88-201ENST00000332814 SCN2AQ99250 2005 aa15.22■□□□□ 0.03
C11orf88-201ENST00000332814 A8MVJ9 347 aa15.22■□□□□ 0.03
C11orf88-201ENST00000332814 WWP2O00308 870 aa15.22■□□□□ 0.03
C11orf88-201ENST00000332814 ITM2AO43736 263 aa15.22■□□□□ 0.03
C11orf88-201ENST00000332814 OR2J2O76002 312 aa15.22■□□□□ 0.03
C11orf88-201ENST00000332814 DDCP20711 480 aa15.22■□□□□ 0.03
C11orf88-201ENST00000332814 NTSP30990 170 aa15.22■□□□□ 0.03
C11orf88-201ENST00000332814 ARRB2P32121 409 aa15.22■□□□□ 0.03
C11orf88-201ENST00000332814 ST13P50502 369 aaKnown RBP15.22■□□□□ 0.03
C11orf88-201ENST00000332814 HLCSP50747 726 aa15.22■□□□□ 0.03
C11orf88-201ENST00000332814 RPL14P50914 215 aaKnown RBP15.22■□□□□ 0.03
C11orf88-201ENST00000332814 PDCD2Q16342 344 aaPredicted RBP15.22■□□□□ 0.03
C11orf88-201ENST00000332814 ZNF750Q32MQ0 723 aa15.22■□□□□ 0.03
C11orf88-201ENST00000332814 UGT3A2Q3SY77 523 aa15.22■□□□□ 0.03
C11orf88-201ENST00000332814 ATG16L1Q676U5 607 aa15.22■□□□□ 0.03
C11orf88-201ENST00000332814 Q6ZSR9 355 aa15.22■□□□□ 0.03
C11orf88-201ENST00000332814 ZNF781Q8N8C0 355 aa15.22■□□□□ 0.03
C11orf88-201ENST00000332814 FAM98AQ8NCA5 519 aaKnown RBP15.22■□□□□ 0.03
C11orf88-201ENST00000332814 SLC22A8Q8TCC7 542 aa15.22■□□□□ 0.03
C11orf88-201ENST00000332814 C19orf60Q96EN9 201 aa15.22■□□□□ 0.03
C11orf88-201ENST00000332814 C11orf24Q96F05 449 aaPredicted RBP15.22■□□□□ 0.03
C11orf88-201ENST00000332814 BBS4Q96RK4 519 aa15.22■□□□□ 0.03
C11orf88-201ENST00000332814 LIN28AQ9H9Z2 209 aaKnown RBP15.22■□□□□ 0.03
C11orf88-201ENST00000332814 CXorf21Q9HAI6 301 aa15.22■□□□□ 0.03
C11orf88-201ENST00000332814 KLHL1Q9NR64 748 aa15.22■□□□□ 0.03
C11orf88-201ENST00000332814 HPF1Q9NWY4 346 aa15.22■□□□□ 0.03
C11orf88-201ENST00000332814 MYOTQ9UBF9 498 aa15.22■□□□□ 0.03
C11orf88-201ENST00000332814 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.22■□□□□ 0.03
C11orf88-201ENST00000332814 CCL27Q9Y4X3 112 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms