RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 COL28A1Q2UY09 1125 aa17.28■□□□□ 0.36
PKP3-201ENST00000331563 NAGSQ8N159 534 aa17.28■□□□□ 0.36
PKP3-201ENST00000331563 STK40Q8N2I9 435 aa17.28■□□□□ 0.36
PKP3-201ENST00000331563 RNF175Q8N4F7 328 aa17.28■□□□□ 0.36
PKP3-201ENST00000331563 OR4C15Q8NGM1 316 aa17.28■□□□□ 0.36
PKP3-201ENST00000331563 LINC00052Q96N35 136 aa17.28■□□□□ 0.36
PKP3-201ENST00000331563 KATNB1Q9BVA0 655 aa17.28■□□□□ 0.36
PKP3-201ENST00000331563 RANBP3Q9H6Z4 567 aaPredicted RBP17.28■□□□□ 0.36
PKP3-201ENST00000331563 PCDHGB7Q9Y5F8 929 aa17.28■□□□□ 0.36
PKP3-201ENST00000331563 PATJQ8NI35 1801 aa17.28■□□□□ 0.36
PKP3-201ENST00000331563 SULT1B1O43704 296 aa17.27■□□□□ 0.36
PKP3-201ENST00000331563 SLC25A14O95258 325 aaPredicted RBP17.27■□□□□ 0.36
PKP3-201ENST00000331563 RGRP47804 291 aa17.27■□□□□ 0.36
PKP3-201ENST00000331563 MLLT11Q13015 90 aaPredicted RBP17.27■□□□□ 0.36
PKP3-201ENST00000331563 EXOSC2Q13868 293 aaKnown RBP17.27■□□□□ 0.36
PKP3-201ENST00000331563 SF3A2Q15428 464 aaKnown RBP17.27■□□□□ 0.36
PKP3-201ENST00000331563 ZNF628Q5EBL2 1059 aa17.27■□□□□ 0.36
PKP3-201ENST00000331563 SLC39A5Q6ZMH5 540 aa17.27■□□□□ 0.36
PKP3-201ENST00000331563 ASB18Q6ZVZ8 466 aa17.27■□□□□ 0.36
PKP3-201ENST00000331563 OR6M1Q8NGM8 313 aa17.27■□□□□ 0.36
PKP3-201ENST00000331563 UBQLN2Q9UHD9 624 aa17.27■□□□□ 0.36
PKP3-201ENST00000331563 CYB5R1Q9UHQ9 305 aa17.27■□□□□ 0.36
PKP3-201ENST00000331563 A0A0A6YYJ9 748 aa17.27■□□□□ 0.35
PKP3-201ENST00000331563 A0A0D9SEW6 157 aa17.27■□□□□ 0.35
PKP3-201ENST00000331563 LRRTM2O43300 516 aa17.27■□□□□ 0.35
PKP3-201ENST00000331563 GASTP01350 101 aa17.27■□□□□ 0.35
PKP3-201ENST00000331563 IRF1P10914 325 aa17.27■□□□□ 0.35
PKP3-201ENST00000331563 PIPP12273 146 aaPredicted RBP17.27■□□□□ 0.35
PKP3-201ENST00000331563 ITGB8P26012 769 aa17.27■□□□□ 0.35
PKP3-201ENST00000331563 HOXA1P49639 335 aaPredicted RBP17.27■□□□□ 0.35
PKP3-201ENST00000331563 NCF4Q15080 339 aa17.27■□□□□ 0.35
PKP3-201ENST00000331563 UGT8Q16880 541 aa17.27■□□□□ 0.35
PKP3-201ENST00000331563 ATAT1Q5SQI0 421 aa17.27■□□□□ 0.35
PKP3-201ENST00000331563 ADGRD2Q7Z7M1 963 aa17.27■□□□□ 0.35
PKP3-201ENST00000331563 LAPTM4BQ86VI4 370 aa17.27■□□□□ 0.35
PKP3-201ENST00000331563 KCT2Q8NC54 265 aa17.27■□□□□ 0.35
PKP3-201ENST00000331563 CEP76Q8TAP6 659 aa17.27■□□□□ 0.35
PKP3-201ENST00000331563 INTS12Q96CB8 462 aaKnown RBP17.27■□□□□ 0.35
PKP3-201ENST00000331563 GHITMQ9H3K2 345 aa17.27■□□□□ 0.35
PKP3-201ENST00000331563 LDAHQ9H6V9 325 aa17.27■□□□□ 0.35
PKP3-201ENST00000331563 FOLH1BQ9HBA9 442 aa17.27■□□□□ 0.35
PKP3-201ENST00000331563 RAB23Q9ULC3 237 aa17.27■□□□□ 0.35
PKP3-201ENST00000331563 STON1Q9Y6Q2 735 aa17.27■□□□□ 0.35
PKP3-201ENST00000331563 CHD9Q3L8U1 2897 aa17.27■□□□□ 0.35
PKP3-201ENST00000331563 GBF1Q92538 1859 aa17.27■□□□□ 0.35
PKP3-201ENST00000331563 SLC38A8A6NNN8 435 aa17.26■□□□□ 0.35
PKP3-201ENST00000331563 ZAR1LA6NP61 321 aa17.26■□□□□ 0.35
PKP3-201ENST00000331563 FAM227AF5H4B4 570 aa17.26■□□□□ 0.35
PKP3-201ENST00000331563 CHP2O43745 196 aa17.26■□□□□ 0.35
PKP3-201ENST00000331563 PCDH7O60245 1069 aa17.26■□□□□ 0.35
PKP3-201ENST00000331563 LAMP1P11279 417 aa17.26■□□□□ 0.35
PKP3-201ENST00000331563 CD9P21926 228 aa17.26■□□□□ 0.35
PKP3-201ENST00000331563 DGKAP23743 735 aa17.26■□□□□ 0.35
PKP3-201ENST00000331563 TRIM23P36406 574 aa17.26■□□□□ 0.35
PKP3-201ENST00000331563 AVPR1BP47901 424 aa17.26■□□□□ 0.35
PKP3-201ENST00000331563 AKR1D1P51857 326 aa17.26■□□□□ 0.35
PKP3-201ENST00000331563 FLI1Q01543 452 aaPredicted RBP17.26■□□□□ 0.35
PKP3-201ENST00000331563 GREB1Q4ZG55 1949 aa17.26■□□□□ 0.35
PKP3-201ENST00000331563 CORO6Q6QEF8 472 aa17.26■□□□□ 0.35
PKP3-201ENST00000331563 TRILQ7L0X0 811 aa17.26■□□□□ 0.35
PKP3-201ENST00000331563 ZNF683Q8IZ20 524 aa17.26■□□□□ 0.35
PKP3-201ENST00000331563 DOCK4Q8N1I0 1966 aa17.26■□□□□ 0.35
PKP3-201ENST00000331563 NANOGP1Q8N7R0 232 aa17.26■□□□□ 0.35
PKP3-201ENST00000331563 VWCEQ96DN2 955 aa17.26■□□□□ 0.35
PKP3-201ENST00000331563 CMTM7Q96FZ5 175 aa17.26■□□□□ 0.35
PKP3-201ENST00000331563 IER2Q9BTL4 223 aa17.26■□□□□ 0.35
PKP3-201ENST00000331563 TMEM43Q9BTV4 400 aa17.26■□□□□ 0.35
PKP3-201ENST00000331563 HTATIP2Q9BUP3 242 aa17.26■□□□□ 0.35
PKP3-201ENST00000331563 GLS2Q9UI32 602 aa17.26■□□□□ 0.35
PKP3-201ENST00000331563 TRAV6A0A075B6T7 132 aa17.26■□□□□ 0.35
PKP3-201ENST00000331563 F8W036 122 aa17.26■□□□□ 0.35
PKP3-201ENST00000331563 NUP62P37198 522 aaPredicted RBP17.26■□□□□ 0.35
PKP3-201ENST00000331563 RPL35P42766 123 aaKnown RBP17.26■□□□□ 0.35
PKP3-201ENST00000331563 EPHA5P54756 1037 aa17.26■□□□□ 0.35
PKP3-201ENST00000331563 CASP12Q6UXS9 341 aa17.26■□□□□ 0.35
PKP3-201ENST00000331563 ZNF730Q6ZMV8 503 aa17.26■□□□□ 0.35
PKP3-201ENST00000331563 PROKR2Q8NFJ6 384 aa17.26■□□□□ 0.35
PKP3-201ENST00000331563 SORCS2Q96PQ0 1159 aa17.26■□□□□ 0.35
PKP3-201ENST00000331563 CUEDC1Q9NWM3 386 aaPredicted RBP17.26■□□□□ 0.35
PKP3-201ENST00000331563 CDH10Q9Y6N8 788 aa17.26■□□□□ 0.35
PKP3-201ENST00000331563 DOCK6Q96HP0 2047 aa17.26■□□□□ 0.35
PKP3-201ENST00000331563 SH3BGRLO75368 114 aa17.25■□□□□ 0.35
PKP3-201ENST00000331563 GSTM5P46439 218 aa17.25■□□□□ 0.35
PKP3-201ENST00000331563 MNX1P50219 401 aaPredicted RBP17.25■□□□□ 0.35
PKP3-201ENST00000331563 DEFB103AP81534 67 aa17.25■□□□□ 0.35
PKP3-201ENST00000331563 DDX39BQ13838 428 aaKnown RBP17.25■□□□□ 0.35
PKP3-201ENST00000331563 RGNQ15493 299 aa17.25■□□□□ 0.35
PKP3-201ENST00000331563 TEAD4Q15561 434 aa17.25■□□□□ 0.35
PKP3-201ENST00000331563 SF1Q15637 639 aaKnown RBP17.25■□□□□ 0.35
PKP3-201ENST00000331563 MSANTD1Q6ZTZ1 278 aa17.25■□□□□ 0.35
PKP3-201ENST00000331563 CHMP1BQ7LBR1 199 aa17.25■□□□□ 0.35
PKP3-201ENST00000331563 GHDCQ8N2G8 530 aa17.25■□□□□ 0.35
PKP3-201ENST00000331563 SKA2Q8WVK7 121 aaPredicted RBP17.25■□□□□ 0.35
PKP3-201ENST00000331563 WBP2Q969T9 261 aa17.25■□□□□ 0.35
PKP3-201ENST00000331563 CREB3L1Q96BA8 519 aa17.25■□□□□ 0.35
PKP3-201ENST00000331563 AHCYL2Q96HN2 611 aaKnown RBP17.25■□□□□ 0.35
PKP3-201ENST00000331563 BOCQ9BWV1 1114 aa17.25■□□□□ 0.35
PKP3-201ENST00000331563 TSSK6Q9BXA6 273 aa17.25■□□□□ 0.35
PKP3-201ENST00000331563 PPP1R3EQ9H7J1 279 aa17.25■□□□□ 0.35
PKP3-201ENST00000331563 HPF1Q9NWY4 346 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms