RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 FHP07954 510 aa14.08□□□□□ -0.16
TPM3-205ENST00000328159 ATP6V1B1P15313 513 aa14.08□□□□□ -0.16
TPM3-205ENST00000328159 ST6GAL1P15907 406 aa14.08□□□□□ -0.16
TPM3-205ENST00000328159 CDH3P22223 829 aa14.08□□□□□ -0.16
TPM3-205ENST00000328159 RRM2P31350 389 aa14.08□□□□□ -0.16
TPM3-205ENST00000328159 OR1E2P47887 323 aa14.08□□□□□ -0.16
TPM3-205ENST00000328159 ANXA11P50995 505 aaKnown RBP14.08□□□□□ -0.16
TPM3-205ENST00000328159 VSX2P58304 361 aaPredicted RBP14.08□□□□□ -0.16
TPM3-205ENST00000328159 KCNAB2Q13303 367 aa14.08□□□□□ -0.16
TPM3-205ENST00000328159 KCTD21Q4G0X4 260 aa14.08□□□□□ -0.16
TPM3-205ENST00000328159 ZC3H12BQ5HYM0 836 aaKnown RBP14.08□□□□□ -0.16
TPM3-205ENST00000328159 KLHL35Q6PF15 583 aa14.08□□□□□ -0.16
TPM3-205ENST00000328159 TMEM107Q6UX40 140 aa14.08□□□□□ -0.16
TPM3-205ENST00000328159 UBALD2Q8IYN6 164 aa14.08□□□□□ -0.16
TPM3-205ENST00000328159 TMEFF1Q8IYR6 380 aa14.08□□□□□ -0.16
TPM3-205ENST00000328159 DEFB123Q8N688 67 aa14.08□□□□□ -0.16
TPM3-205ENST00000328159 METTL25Q8N6Q8 603 aa14.08□□□□□ -0.16
TPM3-205ENST00000328159 CSNK1A1LQ8N752 337 aa14.08□□□□□ -0.16
TPM3-205ENST00000328159 OR9A2Q8NGT5 310 aa14.08□□□□□ -0.16
TPM3-205ENST00000328159 ZNF300Q96RE9 604 aaPredicted RBP14.08□□□□□ -0.16
TPM3-205ENST00000328159 ZNF347Q96SE7 839 aa14.08□□□□□ -0.16
TPM3-205ENST00000328159 LYRM4Q9HD34 91 aa14.08□□□□□ -0.16
TPM3-205ENST00000328159 MS4A12Q9NXJ0 267 aa14.08□□□□□ -0.16
TPM3-205ENST00000328159 P2RX2Q9UBL9 471 aa14.08□□□□□ -0.16
TPM3-205ENST00000328159 ZNF451Q9Y4E5 1061 aa14.08□□□□□ -0.16
TPM3-205ENST00000328159 PCDHGB3Q9Y5G1 929 aa14.08□□□□□ -0.16
TPM3-205ENST00000328159 TP53BP1Q12888 1972 aaPredicted RBP14.08□□□□□ -0.16
TPM3-205ENST00000328159 SPAG17Q6Q759 2223 aa14.08□□□□□ -0.16
TPM3-205ENST00000328159 CCDC88CQ9P219 2028 aa14.07□□□□□ -0.16
TPM3-205ENST00000328159 PRAMEF27A3QJZ7 478 aa14.07□□□□□ -0.16
TPM3-205ENST00000328159 PRAMEF25A6NGN4 478 aa14.07□□□□□ -0.16
TPM3-205ENST00000328159 AQP9O43315 295 aa14.07□□□□□ -0.16
TPM3-205ENST00000328159 DCNP07585 359 aaKnown RBP14.07□□□□□ -0.16
TPM3-205ENST00000328159 ITGA2P17301 1181 aa14.07□□□□□ -0.16
TPM3-205ENST00000328159 IGFBP5P24593 272 aa14.07□□□□□ -0.16
TPM3-205ENST00000328159 TLX1P31314 330 aaPredicted RBP14.07□□□□□ -0.16
TPM3-205ENST00000328159 DAPP51397 102 aa14.07□□□□□ -0.16
TPM3-205ENST00000328159 PRKAG1P54619 331 aa14.07□□□□□ -0.16
TPM3-205ENST00000328159 HNRNPKP61978 463 aaKnown RBP eCLIP14.07□□□□□ -0.16
TPM3-205ENST00000328159 OLR1P78380 273 aa14.07□□□□□ -0.16
TPM3-205ENST00000328159 SIM2Q14190 667 aaPredicted RBP14.07□□□□□ -0.16
TPM3-205ENST00000328159 CYP27C1Q4G0S4 372 aa14.07□□□□□ -0.16
TPM3-205ENST00000328159 CYP4Z1Q86W10 505 aa14.07□□□□□ -0.16
TPM3-205ENST00000328159 C19orf47Q8N9M1 422 aaKnown RBP14.07□□□□□ -0.16
TPM3-205ENST00000328159 OR5D16Q8NGK9 328 aa14.07□□□□□ -0.16
TPM3-205ENST00000328159 XAGE5Q8WWM1 108 aa14.07□□□□□ -0.16
TPM3-205ENST00000328159 CSF3RQ99062 836 aa14.07□□□□□ -0.16
TPM3-205ENST00000328159 CCDC3Q9BQI4 270 aa14.07□□□□□ -0.16
TPM3-205ENST00000328159 C3orf14Q9HBI5 128 aa14.07□□□□□ -0.16
TPM3-205ENST00000328159 FAM60AQ9NP50 221 aa14.07□□□□□ -0.16
TPM3-205ENST00000328159 PRDM9Q9NQV7 894 aa14.07□□□□□ -0.16
TPM3-205ENST00000328159 SIT1Q9Y3P8 196 aa14.07□□□□□ -0.16
TPM3-205ENST00000328159 TESMINQ9Y4I5 508 aa14.07□□□□□ -0.16
TPM3-205ENST00000328159 SLC22A7Q9Y694 548 aa14.07□□□□□ -0.16
TPM3-205ENST00000328159 ZNF860A6NHJ4 632 aa14.06□□□□□ -0.16
TPM3-205ENST00000328159 LILRA5A6NI73 299 aa14.06□□□□□ -0.16
TPM3-205ENST00000328159 C19orf67A6NJJ6 358 aa14.06□□□□□ -0.16
TPM3-205ENST00000328159 ADAMDEC1O15204 470 aa14.06□□□□□ -0.16
TPM3-205ENST00000328159 MITFO75030 526 aaPredicted RBP14.06□□□□□ -0.16
TPM3-205ENST00000328159 MFN2O95140 757 aa14.06□□□□□ -0.16
TPM3-205ENST00000328159 HMGN2P05204 90 aaKnown RBP14.06□□□□□ -0.16
TPM3-205ENST00000328159 PROS1P07225 676 aa14.06□□□□□ -0.16
TPM3-205ENST00000328159 CD247P20963 164 aa14.06□□□□□ -0.16
TPM3-205ENST00000328159 PIGAP37287 484 aa14.06□□□□□ -0.16
TPM3-205ENST00000328159 MC3RP41968 323 aa14.06□□□□□ -0.16
TPM3-205ENST00000328159 SIM1P81133 766 aaPredicted RBP14.06□□□□□ -0.16
TPM3-205ENST00000328159 PRR5P85299 388 aa14.06□□□□□ -0.16
TPM3-205ENST00000328159 LASP1Q14847 261 aaKnown RBP14.06□□□□□ -0.16
TPM3-205ENST00000328159 SYPL1Q16563 259 aa14.06□□□□□ -0.16
TPM3-205ENST00000328159 KDM4DQ6B0I6 523 aa14.06□□□□□ -0.16
TPM3-205ENST00000328159 PRSS41Q7RTY9 318 aa14.06□□□□□ -0.16
TPM3-205ENST00000328159 C17orf82Q86X59 251 aaPredicted RBP14.06□□□□□ -0.16
TPM3-205ENST00000328159 SAMD14Q8IZD0 417 aaPredicted RBP14.06□□□□□ -0.16
TPM3-205ENST00000328159 C8orf59Q8N0T1 100 aaPredicted RBP14.06□□□□□ -0.16
TPM3-205ENST00000328159 LRRC25Q8N386 305 aaPredicted RBP14.06□□□□□ -0.16
TPM3-205ENST00000328159 OR4K14Q8NGD5 310 aa14.06□□□□□ -0.16
TPM3-205ENST00000328159 MIPOL1Q8TD10 442 aa14.06□□□□□ -0.16
TPM3-205ENST00000328159 ELP4Q96EB1 424 aa14.06□□□□□ -0.16
TPM3-205ENST00000328159 YTHDF1Q9BYJ9 559 aaKnown RBP14.06□□□□□ -0.16
TPM3-205ENST00000328159 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.06□□□□□ -0.16
TPM3-205ENST00000328159 CXorf56Q9H5V9 222 aa14.06□□□□□ -0.16
TPM3-205ENST00000328159 IL21RQ9HBE5 538 aa14.06□□□□□ -0.16
TPM3-205ENST00000328159 TMEM74BQ9NUR3 256 aa14.06□□□□□ -0.16
TPM3-205ENST00000328159 EXD2Q9NVH0 621 aa14.06□□□□□ -0.16
TPM3-205ENST00000328159 SH3GLB1Q9Y371 365 aa14.06□□□□□ -0.16
TPM3-205ENST00000328159 LYVE1Q9Y5Y7 322 aa14.06□□□□□ -0.16
TPM3-205ENST00000328159 TRIOO75962 3097 aa14.06□□□□□ -0.16
TPM3-205ENST00000328159 SLC9B1P1A6NJY1 282 aa14.06□□□□□ -0.16
TPM3-205ENST00000328159 LMO7DNF2Z398 122 aa14.06□□□□□ -0.16
TPM3-205ENST00000328159 TNFRSF11BO00300 401 aa14.06□□□□□ -0.16
TPM3-205ENST00000328159 HCRTR1O43613 425 aa14.06□□□□□ -0.16
TPM3-205ENST00000328159 GALR3O60755 368 aaPredicted RBP14.06□□□□□ -0.16
TPM3-205ENST00000328159 DNAJB5O75953 348 aa14.06□□□□□ -0.16
TPM3-205ENST00000328159 PABPC4LP0CB38 370 aaKnown RBP14.06□□□□□ -0.16
TPM3-205ENST00000328159 NR2F1P10589 423 aa14.06□□□□□ -0.16
TPM3-205ENST00000328159 ITGAMP11215 1152 aa14.06□□□□□ -0.16
TPM3-205ENST00000328159 PPP2R1BP30154 601 aa14.06□□□□□ -0.16
TPM3-205ENST00000328159 XCR1P46094 333 aa14.06□□□□□ -0.16
TPM3-205ENST00000328159 CAPZBP47756 277 aa14.06□□□□□ -0.16
TPM3-205ENST00000328159 CSNK1EP49674 416 aaKnown RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms