RNA–Protein interactions for RNA: ENST00000326656.12

PTPMT1-201, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-201ENST00000326656 ZDHHC18Q9NUE0 388 aa16.33■□□□□ 0.2
PTPMT1-201ENST00000326656 TUBA8Q9NY65 449 aaPredicted RBP16.33■□□□□ 0.2
PTPMT1-201ENST00000326656 A0A1W2PR48 441 aa16.32■□□□□ 0.2
PTPMT1-201ENST00000326656 ANKRD33BA6NCL7 494 aa16.32■□□□□ 0.2
PTPMT1-201ENST00000326656 CAPN14A8MX76 684 aa16.32■□□□□ 0.2
PTPMT1-201ENST00000326656 OR10H2O60403 315 aa16.32■□□□□ 0.2
PTPMT1-201ENST00000326656 KRT38O76015 456 aa16.32■□□□□ 0.2
PTPMT1-201ENST00000326656 NADKO95544 446 aaPredicted RBP16.32■□□□□ 0.2
PTPMT1-201ENST00000326656 RBP1P09455 135 aa16.32■□□□□ 0.2
PTPMT1-201ENST00000326656 NR2F6P10588 404 aa16.32■□□□□ 0.2
PTPMT1-201ENST00000326656 GABRA1P14867 456 aa16.32■□□□□ 0.2
PTPMT1-201ENST00000326656 MSX1P28360 303 aa16.32■□□□□ 0.2
PTPMT1-201ENST00000326656 DNASE1L1P49184 302 aa16.32■□□□□ 0.2
PTPMT1-201ENST00000326656 SLC37A1P57057 533 aa16.32■□□□□ 0.2
PTPMT1-201ENST00000326656 IRF9Q00978 393 aa16.32■□□□□ 0.2
PTPMT1-201ENST00000326656 TBCELQ5QJ74 424 aa16.32■□□□□ 0.2
PTPMT1-201ENST00000326656 WLSQ5T9L3 541 aa16.32■□□□□ 0.2
PTPMT1-201ENST00000326656 LYPD8Q6UX82 237 aa16.32■□□□□ 0.2
PTPMT1-201ENST00000326656 RNF111Q6ZNA4 994 aa16.32■□□□□ 0.2
PTPMT1-201ENST00000326656 GOLGA7Q7Z5G4 137 aa16.32■□□□□ 0.2
PTPMT1-201ENST00000326656 NUDT13Q86X67 352 aa16.32■□□□□ 0.2
PTPMT1-201ENST00000326656 DMRTC2Q8IXT2 367 aaPredicted RBP16.32■□□□□ 0.2
PTPMT1-201ENST00000326656 FBXW8Q8N3Y1 598 aa16.32■□□□□ 0.2
PTPMT1-201ENST00000326656 RNF175Q8N4F7 328 aa16.32■□□□□ 0.2
PTPMT1-201ENST00000326656 FUT8Q9BYC5 575 aa16.32■□□□□ 0.2
PTPMT1-201ENST00000326656 LDAHQ9H6V9 325 aa16.32■□□□□ 0.2
PTPMT1-201ENST00000326656 NPDC1Q9NQX5 325 aaPredicted RBP16.32■□□□□ 0.2
PTPMT1-201ENST00000326656 AHSPQ9NZD4 102 aa16.32■□□□□ 0.2
PTPMT1-201ENST00000326656 KCNN3Q9UGI6 736 aa16.32■□□□□ 0.2
PTPMT1-201ENST00000326656 ACAD8Q9UKU7 415 aa16.32■□□□□ 0.2
PTPMT1-201ENST00000326656 TRGV5A0A0B4J1U4 118 aa16.31■□□□□ 0.2
PTPMT1-201ENST00000326656 ATP6AP2A0A1C7CYW4 349 aa16.31■□□□□ 0.2
PTPMT1-201ENST00000326656 EEDO75530 441 aaKnown RBP16.31■□□□□ 0.2
PTPMT1-201ENST00000326656 ATP6AP2O75787 350 aa16.31■□□□□ 0.2
PTPMT1-201ENST00000326656 ALDOAP04075 364 aaKnown RBP16.31■□□□□ 0.2
PTPMT1-201ENST00000326656 GLI4P10075 376 aa16.31■□□□□ 0.2
PTPMT1-201ENST00000326656 COL6A2P12110 1019 aa16.31■□□□□ 0.2
PTPMT1-201ENST00000326656 NR0B1P51843 470 aaKnown RBP16.31■□□□□ 0.2
PTPMT1-201ENST00000326656 HERVK_113P63132 956 aa16.31■□□□□ 0.2
PTPMT1-201ENST00000326656 ERVK-8P63133 956 aa16.31■□□□□ 0.2
PTPMT1-201ENST00000326656 KCNJ2P63252 427 aa16.31■□□□□ 0.2
PTPMT1-201ENST00000326656 ZNF267Q14586 743 aaPredicted RBP16.31■□□□□ 0.2
PTPMT1-201ENST00000326656 OR52E8Q6IFG1 317 aa16.31■□□□□ 0.2
PTPMT1-201ENST00000326656 C8orf74Q6P047 294 aa16.31■□□□□ 0.2
PTPMT1-201ENST00000326656 ZNF585AQ6P3V2 769 aa16.31■□□□□ 0.2
PTPMT1-201ENST00000326656 ADGRD1Q6QNK2 874 aa16.31■□□□□ 0.2
PTPMT1-201ENST00000326656 DGAT2L6Q6ZPD8 337 aa16.31■□□□□ 0.2
PTPMT1-201ENST00000326656 CCDC71Q8IV32 467 aaPredicted RBP16.31■□□□□ 0.2
PTPMT1-201ENST00000326656 CLYBLQ8N0X4 340 aa16.31■□□□□ 0.2
PTPMT1-201ENST00000326656 TAGAPQ8N103 731 aa16.31■□□□□ 0.2
PTPMT1-201ENST00000326656 LRRC25Q8N386 305 aaPredicted RBP16.31■□□□□ 0.2
PTPMT1-201ENST00000326656 MYRIPQ8NFW9 859 aa16.31■□□□□ 0.2
PTPMT1-201ENST00000326656 NTMT1Q9BV86 223 aa16.31■□□□□ 0.2
PTPMT1-201ENST00000326656 CNPPD1Q9BV87 410 aa16.31■□□□□ 0.2
PTPMT1-201ENST00000326656 ERVK-6Q9BXR3 956 aa16.31■□□□□ 0.2
PTPMT1-201ENST00000326656 WWTR1Q9GZV5 400 aa16.31■□□□□ 0.2
PTPMT1-201ENST00000326656 B4GALT7Q9UBV7 327 aa16.31■□□□□ 0.2
PTPMT1-201ENST00000326656 ADAM29Q9UKF5 820 aa16.31■□□□□ 0.2
PTPMT1-201ENST00000326656 ERVK-19Q9WJR5 959 aa16.31■□□□□ 0.2
PTPMT1-201ENST00000326656 RNF11Q9Y3C5 154 aa16.31■□□□□ 0.2
PTPMT1-201ENST00000326656 CHCHD2Q9Y6H1 151 aaPredicted RBP16.31■□□□□ 0.2
PTPMT1-201ENST00000326656 C2CD3Q4AC94 2353 aa16.3■□□□□ 0.2
PTPMT1-201ENST00000326656 STX16-NPEPL1H3BU86 382 aa16.3■□□□□ 0.2
PTPMT1-201ENST00000326656 HRKO00198 91 aa16.3■□□□□ 0.2
PTPMT1-201ENST00000326656 STX16O14662 325 aa16.3■□□□□ 0.2
PTPMT1-201ENST00000326656 TP53I11O14683 189 aa16.3■□□□□ 0.2
PTPMT1-201ENST00000326656 TMPRSS11DO60235 418 aa16.3■□□□□ 0.2
PTPMT1-201ENST00000326656 PIGAP37287 484 aa16.3■□□□□ 0.2
PTPMT1-201ENST00000326656 ZFP36L2P47974 494 aaKnown RBP16.3■□□□□ 0.2
PTPMT1-201ENST00000326656 KRTAP10-9P60411 292 aa16.3■□□□□ 0.2
PTPMT1-201ENST00000326656 EBPQ15125 230 aaKnown RBP16.3■□□□□ 0.2
PTPMT1-201ENST00000326656 NTRK2Q16620 822 aa16.3■□□□□ 0.2
PTPMT1-201ENST00000326656 TECRLQ5HYJ1 363 aa16.3■□□□□ 0.2
PTPMT1-201ENST00000326656 RPRMLQ8N4K4 120 aa16.3■□□□□ 0.2
PTPMT1-201ENST00000326656 OR5M9Q8NGP3 310 aa16.3■□□□□ 0.2
PTPMT1-201ENST00000326656 OR10Q1Q8NGQ4 319 aa16.3■□□□□ 0.2
PTPMT1-201ENST00000326656 SREK1Q8WXA9 508 aaKnown RBP16.3■□□□□ 0.2
PTPMT1-201ENST00000326656 ATP6V1E2Q96A05 226 aa16.3■□□□□ 0.2
PTPMT1-201ENST00000326656 ISL2Q96A47 359 aa16.3■□□□□ 0.2
PTPMT1-201ENST00000326656 SECISBP2Q96T21 854 aaKnown RBP16.3■□□□□ 0.2
PTPMT1-201ENST00000326656 LRRC1Q9BTT6 524 aa16.3■□□□□ 0.2
PTPMT1-201ENST00000326656 UCK2Q9BZX2 261 aa16.3■□□□□ 0.2
PTPMT1-201ENST00000326656 ZNF703Q9H7S9 590 aaPredicted RBP16.3■□□□□ 0.2
PTPMT1-201ENST00000326656 SEMA4BQ9NPR2 832 aaPredicted RBP16.3■□□□□ 0.2
PTPMT1-201ENST00000326656 CPSF2Q9P2I0 782 aaKnown RBP16.3■□□□□ 0.2
PTPMT1-201ENST00000326656 MTRF1LQ9UGC7 380 aaKnown RBP16.3■□□□□ 0.2
PTPMT1-201ENST00000326656 FAM215AQ9Y5M1 114 aa16.3■□□□□ 0.2
PTPMT1-201ENST00000326656 LIPGQ9Y5X9 500 aa16.3■□□□□ 0.2
PTPMT1-201ENST00000326656 IKBKGQ9Y6K9 419 aa16.3■□□□□ 0.2
PTPMT1-201ENST00000326656 SPG11Q96JI7 2443 aa16.3■□□□□ 0.2
PTPMT1-201ENST00000326656 NINQ8N4C6 2090 aa16.3■□□□□ 0.2
PTPMT1-201ENST00000326656 C2orf92A0A1B0GVN3 265 aa16.29■□□□□ 0.2
PTPMT1-201ENST00000326656 ESYT3A0FGR9 886 aa16.29■□□□□ 0.2
PTPMT1-201ENST00000326656 NKX2-6A6NCS4 301 aa16.29■□□□□ 0.2
PTPMT1-201ENST00000326656 OR7A17O14581 309 aa16.29■□□□□ 0.2
PTPMT1-201ENST00000326656 GUCY1B2O75343 617 aa16.29■□□□□ 0.2
PTPMT1-201ENST00000326656 SIX3O95343 332 aaPredicted RBP16.29■□□□□ 0.2
PTPMT1-201ENST00000326656 PIK3R1P27986 724 aa16.29■□□□□ 0.2
PTPMT1-201ENST00000326656 SERPINB9P50453 376 aa16.29■□□□□ 0.2
PTPMT1-201ENST00000326656 NEK2P51955 445 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms