RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 IGHG3P01860 377 aa6.14□□□□□ -1.43
CSTF3-201ENST00000323959 MSH3P20585 1137 aa6.14□□□□□ -1.43
CSTF3-201ENST00000323959 CALB2P22676 271 aa6.14□□□□□ -1.43
CSTF3-201ENST00000323959 LHCGRP22888 699 aa6.14□□□□□ -1.43
CSTF3-201ENST00000323959 GCH1P30793 250 aa6.14□□□□□ -1.43
CSTF3-201ENST00000323959 ARRB2P32121 409 aa6.14□□□□□ -1.43
CSTF3-201ENST00000323959 ACVR1BP36896 505 aa6.14□□□□□ -1.43
CSTF3-201ENST00000323959 PLOD1Q02809 727 aaPredicted RBP6.14□□□□□ -1.43
CSTF3-201ENST00000323959 RBBP5Q15291 538 aaKnown RBP6.14□□□□□ -1.43
CSTF3-201ENST00000323959 SPATS1Q496A3 300 aa6.14□□□□□ -1.43
CSTF3-201ENST00000323959 KPRPQ5T749 579 aaPredicted RBP6.14□□□□□ -1.43
CSTF3-201ENST00000323959 Q6ZVL8 140 aa6.14□□□□□ -1.43
CSTF3-201ENST00000323959 PIANPQ8IYJ0 282 aa6.14□□□□□ -1.43
CSTF3-201ENST00000323959 AFAP1L2Q8N4X5 818 aa6.14□□□□□ -1.43
CSTF3-201ENST00000323959 ZFP62Q8NB50 900 aaPredicted RBP6.14□□□□□ -1.43
CSTF3-201ENST00000323959 OR10H5Q8NGA6 315 aa6.14□□□□□ -1.43
CSTF3-201ENST00000323959 TSPEARQ8WU66 669 aa6.14□□□□□ -1.43
CSTF3-201ENST00000323959 PIK3IP1Q96FE7 263 aa6.14□□□□□ -1.43
CSTF3-201ENST00000323959 IMMP1LQ96LU5 166 aa6.14□□□□□ -1.43
CSTF3-201ENST00000323959 C3orf18Q9UK00 162 aa6.14□□□□□ -1.43
CSTF3-201ENST00000323959 FREM1Q5H8C1 2179 aa6.14□□□□□ -1.43
CSTF3-201ENST00000323959 C1orf232A0A0U1RR37 186 aa6.13□□□□□ -1.43
CSTF3-201ENST00000323959 SLC25A12O75746 678 aa6.13□□□□□ -1.43
CSTF3-201ENST00000323959 BMP5P22003 454 aa6.13□□□□□ -1.43
CSTF3-201ENST00000323959 LOXP28300 417 aaPredicted RBP6.13□□□□□ -1.43
CSTF3-201ENST00000323959 TIMP3P35625 211 aa6.13□□□□□ -1.43
CSTF3-201ENST00000323959 CLNS1AP54105 237 aaKnown RBP6.13□□□□□ -1.43
CSTF3-201ENST00000323959 PKNOX1P55347 436 aa6.13□□□□□ -1.43
CSTF3-201ENST00000323959 LOXL3P58215 753 aa6.13□□□□□ -1.43
CSTF3-201ENST00000323959 IL2P60568 153 aa6.13□□□□□ -1.43
CSTF3-201ENST00000323959 NCALDP61601 193 aa6.13□□□□□ -1.43
CSTF3-201ENST00000323959 IFT88Q13099 833 aa6.13□□□□□ -1.43
CSTF3-201ENST00000323959 TTLL9Q3SXZ7 439 aa6.13□□□□□ -1.43
CSTF3-201ENST00000323959 GGTA1PQ4G0N0 100 aa6.13□□□□□ -1.43
CSTF3-201ENST00000323959 KANK2Q63ZY3 851 aa6.13□□□□□ -1.43
CSTF3-201ENST00000323959 LRRC66Q68CR7 880 aa6.13□□□□□ -1.43
CSTF3-201ENST00000323959 POMZP3Q6PJE2 187 aa6.13□□□□□ -1.43
CSTF3-201ENST00000323959 PEG10Q86TG7 708 aaKnown RBP6.13□□□□□ -1.43
CSTF3-201ENST00000323959 SERPINA9Q86WD7 417 aa6.13□□□□□ -1.43
CSTF3-201ENST00000323959 RFWD2Q8NHY2 731 aa6.13□□□□□ -1.43
CSTF3-201ENST00000323959 ANKRD49Q8WVL7 239 aa6.13□□□□□ -1.43
CSTF3-201ENST00000323959 PROX1Q92786 737 aa6.13□□□□□ -1.43
CSTF3-201ENST00000323959 SARAFQ96BY9 339 aa6.13□□□□□ -1.43
CSTF3-201ENST00000323959 MRRFQ96E11 262 aaKnown RBP6.13□□□□□ -1.43
CSTF3-201ENST00000323959 METTL2AQ96IZ6 378 aaKnown RBP6.13□□□□□ -1.43
CSTF3-201ENST00000323959 CCDC68Q9H2F9 335 aa6.13□□□□□ -1.43
CSTF3-201ENST00000323959 TRIM33Q9UPN9 1127 aa6.13□□□□□ -1.43
CSTF3-201ENST00000323959 RYR1P21817 5038 aa6.13□□□□□ -1.43
CSTF3-201ENST00000323959 OR6C74A6NCV1 312 aa6.13□□□□□ -1.43
CSTF3-201ENST00000323959 NPIPA2E9PIF3 369 aa6.13□□□□□ -1.43
CSTF3-201ENST00000323959 NPIPA3F8WFD2 350 aa6.13□□□□□ -1.43
CSTF3-201ENST00000323959 PHGDHO43175 533 aaKnown RBP6.13□□□□□ -1.43
CSTF3-201ENST00000323959 ITGA10O75578 1167 aa6.13□□□□□ -1.43
CSTF3-201ENST00000323959 C8GP07360 202 aa6.13□□□□□ -1.43
CSTF3-201ENST00000323959 T-ENOLP0DO92 83 aa6.13□□□□□ -1.43
CSTF3-201ENST00000323959 ST6GAL1P15907 406 aa6.13□□□□□ -1.43
CSTF3-201ENST00000323959 PRPH2P23942 346 aa6.13□□□□□ -1.43
CSTF3-201ENST00000323959 AOAHP28039 575 aa6.13□□□□□ -1.43
CSTF3-201ENST00000323959 OPRM1P35372 400 aa6.13□□□□□ -1.43
CSTF3-201ENST00000323959 PIK3CGP48736 1102 aa6.13□□□□□ -1.43
CSTF3-201ENST00000323959 RGS4P49798 205 aa6.13□□□□□ -1.43
CSTF3-201ENST00000323959 IDH3AP50213 366 aa6.13□□□□□ -1.43
CSTF3-201ENST00000323959 EEF1A2Q05639 463 aaKnown RBP6.13□□□□□ -1.43
CSTF3-201ENST00000323959 BTKQ06187 659 aa6.13□□□□□ -1.43
CSTF3-201ENST00000323959 PDAP1Q13442 181 aaKnown RBP6.13□□□□□ -1.43
CSTF3-201ENST00000323959 COQ5Q5HYK3 327 aa6.13□□□□□ -1.43
CSTF3-201ENST00000323959 OGFOD2Q6N063 350 aa6.13□□□□□ -1.43
CSTF3-201ENST00000323959 CYHR1Q6ZMK1 362 aa6.13□□□□□ -1.43
CSTF3-201ENST00000323959 MAVSQ7Z434 540 aa6.13□□□□□ -1.43
CSTF3-201ENST00000323959 GPR26Q8NDV2 337 aa6.13□□□□□ -1.43
CSTF3-201ENST00000323959 EXOC2Q96KP1 924 aa6.13□□□□□ -1.43
CSTF3-201ENST00000323959 MARK4Q96L34 752 aa6.13□□□□□ -1.43
CSTF3-201ENST00000323959 ZNF382Q96SR6 550 aa6.13□□□□□ -1.43
CSTF3-201ENST00000323959 MECRQ9BV79 373 aa6.13□□□□□ -1.43
CSTF3-201ENST00000323959 ABCF3Q9NUQ8 709 aa6.13□□□□□ -1.43
CSTF3-201ENST00000323959 ASIC5Q9NY37 505 aa6.13□□□□□ -1.43
CSTF3-201ENST00000323959 TRMT6Q9UJA5 497 aaKnown RBP6.13□□□□□ -1.43
CSTF3-201ENST00000323959 CNOT6Q9ULM6 557 aaKnown RBP6.13□□□□□ -1.43
CSTF3-201ENST00000323959 TSC22D4Q9Y3Q8 395 aa6.13□□□□□ -1.43
CSTF3-201ENST00000323959 GFYI3L273 518 aa6.12□□□□□ -1.43
CSTF3-201ENST00000323959 SCAMP2O15127 329 aaKnown RBP6.12□□□□□ -1.43
CSTF3-201ENST00000323959 ITM2AO43736 263 aa6.12□□□□□ -1.43
CSTF3-201ENST00000323959 UGDHO60701 494 aa6.12□□□□□ -1.43
CSTF3-201ENST00000323959 GPC4O75487 556 aa6.12□□□□□ -1.43
CSTF3-201ENST00000323959 WDR47O94967 919 aa6.12□□□□□ -1.43
CSTF3-201ENST00000323959 CLDN7O95471 211 aa6.12□□□□□ -1.43
CSTF3-201ENST00000323959 ENO1P06733 434 aaKnown RBP6.12□□□□□ -1.43
CSTF3-201ENST00000323959 OR56A5P0C7T3 313 aa6.12□□□□□ -1.43
CSTF3-201ENST00000323959 HKR1P10072 659 aa6.12□□□□□ -1.43
CSTF3-201ENST00000323959 PRLHRP49683 370 aa6.12□□□□□ -1.43
CSTF3-201ENST00000323959 HNMTP50135 292 aa6.12□□□□□ -1.43
CSTF3-201ENST00000323959 EEF1A1P68104 462 aaKnown RBP6.12□□□□□ -1.43
CSTF3-201ENST00000323959 SF3B4Q15427 424 aaKnown RBP eCLIP6.12□□□□□ -1.431e-7■■■■□ 19.5
CSTF3-201ENST00000323959 RPE65Q16518 533 aa6.12□□□□□ -1.43
CSTF3-201ENST00000323959 MAPKAPK3Q16644 382 aa6.12□□□□□ -1.43
CSTF3-201ENST00000323959 UGT3A2Q3SY77 523 aa6.12□□□□□ -1.43
CSTF3-201ENST00000323959 UNC50Q53HI1 259 aa6.12□□□□□ -1.43
CSTF3-201ENST00000323959 EEF1A1P5Q5VTE0 462 aa6.12□□□□□ -1.43
CSTF3-201ENST00000323959 SPINK14Q6IE38 97 aa6.12□□□□□ -1.43
CSTF3-201ENST00000323959 SBSNQ6UWP8 590 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms