RNA–Protein interactions for RNA: ENST00000323022.9

CACNA1F-201, Transcript of calcium voltage-gated channel subunit alpha1 F, humanhuman

TSL 1 (best) BASIC

Gene CACNA1F, Length 6,037 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1F-201ENST00000323022 OBP2BQ9NPH6 170 aa11.78□□□□□ -0.52
CACNA1F-201ENST00000323022 C14orf105Q9NVL8 296 aa11.78□□□□□ -0.52
CACNA1F-201ENST00000323022 EMC9Q9Y3B6 208 aa11.78□□□□□ -0.52
CACNA1F-201ENST00000323022 J3QLW9 94 aa11.77□□□□□ -0.52
CACNA1F-201ENST00000323022 SMAD9O15198 467 aaKnown RBP11.77□□□□□ -0.52
CACNA1F-201ENST00000323022 ZNF19P17023 458 aa11.77□□□□□ -0.52
CACNA1F-201ENST00000323022 HNRNPH3P31942 346 aaKnown RBP11.77□□□□□ -0.52
CACNA1F-201ENST00000323022 SLC9A3P48764 834 aa11.77□□□□□ -0.52
CACNA1F-201ENST00000323022 PDE7AQ13946 482 aa11.77□□□□□ -0.52
CACNA1F-201ENST00000323022 SMAD2Q15796 467 aaKnown RBP11.77□□□□□ -0.52
CACNA1F-201ENST00000323022 TMEM200AQ86VY9 491 aa11.77□□□□□ -0.52
CACNA1F-201ENST00000323022 ADAMTS18Q8TE60 1221 aa11.77□□□□□ -0.52
CACNA1F-201ENST00000323022 TSGA13Q96PP4 275 aa11.77□□□□□ -0.52
CACNA1F-201ENST00000323022 CD180Q99467 661 aa11.77□□□□□ -0.52
CACNA1F-201ENST00000323022 CADM1Q9BY67 442 aaKnown RBP11.77□□□□□ -0.52
CACNA1F-201ENST00000323022 SMPD3Q9NY59 655 aaPredicted RBP11.77□□□□□ -0.52
CACNA1F-201ENST00000323022 CXXC1Q9P0U4 656 aaPredicted RBP11.77□□□□□ -0.52
CACNA1F-201ENST00000323022 FNIP2Q9P278 1114 aa11.77□□□□□ -0.52
CACNA1F-201ENST00000323022 KIR2DS5A0A0G2JLQ3 304 aa11.77□□□□□ -0.52
CACNA1F-201ENST00000323022 A0A0G2JNG1 304 aa11.77□□□□□ -0.52
CACNA1F-201ENST00000323022 KIR2DS3K7RE56 304 aa11.77□□□□□ -0.52
CACNA1F-201ENST00000323022 PCSK2P16519 638 aa11.77□□□□□ -0.52
CACNA1F-201ENST00000323022 GRIA1P42261 906 aa11.77□□□□□ -0.52
CACNA1F-201ENST00000323022 GLP1RP43220 463 aa11.77□□□□□ -0.52
CACNA1F-201ENST00000323022 SUOXP51687 545 aa11.77□□□□□ -0.52
CACNA1F-201ENST00000323022 CTBSQ01459 385 aa11.77□□□□□ -0.52
CACNA1F-201ENST00000323022 KIR2DS5Q14953 304 aa11.77□□□□□ -0.52
CACNA1F-201ENST00000323022 OR4C11Q6IEV9 310 aa11.77□□□□□ -0.52
CACNA1F-201ENST00000323022 ZNF782Q6ZMW2 699 aaPredicted RBP11.77□□□□□ -0.52
CACNA1F-201ENST00000323022 GPR149Q86SP6 731 aa11.77□□□□□ -0.52
CACNA1F-201ENST00000323022 NATD1Q8N6N6 113 aa11.77□□□□□ -0.52
CACNA1F-201ENST00000323022 C1GALT1C1LP0DN25 315 aa11.77□□□□□ -0.53
CACNA1F-201ENST00000323022 RBM34P42696 430 aaKnown RBP11.77□□□□□ -0.53
CACNA1F-201ENST00000323022 S100A10P60903 97 aa11.77□□□□□ -0.53
CACNA1F-201ENST00000323022 BLMHQ13867 455 aa11.77□□□□□ -0.53
CACNA1F-201ENST00000323022 PON3Q15166 354 aa11.77□□□□□ -0.53
CACNA1F-201ENST00000323022 RUNDC3AQ59EK9 446 aa11.77□□□□□ -0.53
CACNA1F-201ENST00000323022 RBM48Q5RL73 367 aaKnown RBP11.77□□□□□ -0.53
CACNA1F-201ENST00000323022 PRAMEF20Q5VT98 475 aa11.77□□□□□ -0.53
CACNA1F-201ENST00000323022 TRIM43Q96BQ3 446 aaPredicted RBP11.77□□□□□ -0.53
CACNA1F-201ENST00000323022 ZNF689Q96CS4 500 aaPredicted RBP11.77□□□□□ -0.53
CACNA1F-201ENST00000323022 FAXDC2Q96IV6 333 aa11.77□□□□□ -0.53
CACNA1F-201ENST00000323022 ENKD1Q9H0I2 346 aa11.77□□□□□ -0.53
CACNA1F-201ENST00000323022 PLLPQ9Y342 182 aa11.77□□□□□ -0.53
CACNA1F-201ENST00000323022 SAGE2PA6NJ88 616 aa11.77□□□□□ -0.53
CACNA1F-201ENST00000323022 ANKRD28O15084 1053 aa11.77□□□□□ -0.53
CACNA1F-201ENST00000323022 CRYBA1P05813 215 aa11.77□□□□□ -0.53
CACNA1F-201ENST00000323022 CHRNB2P17787 502 aa11.77□□□□□ -0.53
CACNA1F-201ENST00000323022 HK1P19367 917 aa11.77□□□□□ -0.53
CACNA1F-201ENST00000323022 IL1R2P27930 398 aa11.77□□□□□ -0.53
CACNA1F-201ENST00000323022 AP2S1P53680 142 aaPredicted RBP11.77□□□□□ -0.53
CACNA1F-201ENST00000323022 GABREP78334 506 aa11.77□□□□□ -0.53
CACNA1F-201ENST00000323022 SCGB2B2Q4G0G5 96 aa11.77□□□□□ -0.53
CACNA1F-201ENST00000323022 C7orf57Q8NEG2 295 aa11.77□□□□□ -0.53
CACNA1F-201ENST00000323022 OR5AR1Q8NGP9 310 aa11.77□□□□□ -0.53
CACNA1F-201ENST00000323022 SLC44A1Q8WWI5 657 aa11.77□□□□□ -0.53
CACNA1F-201ENST00000323022 C1orf74Q96LT6 269 aa11.77□□□□□ -0.53
CACNA1F-201ENST00000323022 MALT1Q9UDY8 824 aa11.77□□□□□ -0.53
CACNA1F-201ENST00000323022 C14orf166Q9Y224 244 aaKnown RBP11.77□□□□□ -0.53
CACNA1F-201ENST00000323022 EEFSECP57772 596 aaKnown RBP11.77□□□□□ -0.53
CACNA1F-201ENST00000323022 RING1Q06587 406 aa11.77□□□□□ -0.53
CACNA1F-201ENST00000323022 LPCAT4Q643R3 524 aa11.77□□□□□ -0.53
CACNA1F-201ENST00000323022 P2RY8Q86VZ1 359 aa11.77□□□□□ -0.53
CACNA1F-201ENST00000323022 ESX1Q8N693 406 aa11.77□□□□□ -0.53
CACNA1F-201ENST00000323022 INO80EQ8NBZ0 244 aaPredicted RBP11.77□□□□□ -0.53
CACNA1F-201ENST00000323022 ARL8BQ9NVJ2 186 aa11.77□□□□□ -0.53
CACNA1F-201ENST00000323022 SIX4Q9UIU6 781 aa11.77□□□□□ -0.53
CACNA1F-201ENST00000323022 KANTRA0A1W2PQU2 76 aa11.76□□□□□ -0.53
CACNA1F-201ENST00000323022 TRBC2A0A5B9 178 aa11.76□□□□□ -0.53
CACNA1F-201ENST00000323022 S100A2P29034 98 aa11.76□□□□□ -0.53
CACNA1F-201ENST00000323022 SRP14P37108 136 aaKnown RBP11.76□□□□□ -0.53
CACNA1F-201ENST00000323022 HERVK_113P63132 956 aa11.76□□□□□ -0.53
CACNA1F-201ENST00000323022 MAD2L1BPQ15013 274 aaPredicted RBP11.76□□□□□ -0.53
CACNA1F-201ENST00000323022 ZDHHC21Q8IVQ6 265 aa11.76□□□□□ -0.53
CACNA1F-201ENST00000323022 OR2L2Q8NH16 312 aa11.76□□□□□ -0.53
CACNA1F-201ENST00000323022 MSANTD3Q96H12 275 aa11.76□□□□□ -0.53
CACNA1F-201ENST00000323022 ERMAPQ96PL5 475 aaPredicted RBP11.76□□□□□ -0.53
CACNA1F-201ENST00000323022 ERVK-6Q9BXR3 956 aa11.76□□□□□ -0.53
CACNA1F-201ENST00000323022 ZNF700Q9H0M5 742 aa11.76□□□□□ -0.53
CACNA1F-201ENST00000323022 CCDC86Q9H6F5 360 aaKnown RBP11.76□□□□□ -0.53
CACNA1F-201ENST00000323022 PEX16Q9Y5Y5 336 aa11.76□□□□□ -0.53
CACNA1F-201ENST00000323022 COL2A1P02458 1487 aaPredicted RBP11.76□□□□□ -0.53
CACNA1F-201ENST00000323022 SULT2B1O00204 365 aa11.76□□□□□ -0.53
CACNA1F-201ENST00000323022 CLIC1O00299 241 aa11.76□□□□□ -0.53
CACNA1F-201ENST00000323022 PLOD2O00469 737 aa11.76□□□□□ -0.53
CACNA1F-201ENST00000323022 ORC5O43913 435 aa11.76□□□□□ -0.53
CACNA1F-201ENST00000323022 ITGBL1O95965 494 aaPredicted RBP11.76□□□□□ -0.53
CACNA1F-201ENST00000323022 PAHP00439 452 aa11.76□□□□□ -0.53
CACNA1F-201ENST00000323022 IL3P08700 152 aa11.76□□□□□ -0.53
CACNA1F-201ENST00000323022 DCDP81605 110 aaKnown RBP11.76□□□□□ -0.53
CACNA1F-201ENST00000323022 ALG10BQ5I7T1 473 aa11.76□□□□□ -0.53
CACNA1F-201ENST00000323022 PAMR1Q6UXH9 720 aa11.76□□□□□ -0.53
CACNA1F-201ENST00000323022 MED11Q9P086 117 aa11.76□□□□□ -0.53
CACNA1F-201ENST00000323022 CNTN6Q9UQ52 1028 aa11.76□□□□□ -0.53
CACNA1F-201ENST00000323022 TIMM8BQ9Y5J9 83 aaPredicted RBP11.76□□□□□ -0.53
CACNA1F-201ENST00000323022 E7ENX8 843 aa11.76□□□□□ -0.53
CACNA1F-201ENST00000323022 ITGB7P26010 798 aa11.76□□□□□ -0.53
CACNA1F-201ENST00000323022 CLCN2P51788 898 aa11.76□□□□□ -0.53
CACNA1F-201ENST00000323022 ST3GAL3Q11203 375 aa11.76□□□□□ -0.53
CACNA1F-201ENST00000323022 FAM189A2Q15884 450 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms