RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 CDC7O00311 574 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 UBFD1O14562 309 aaKnown RBP6.77□□□□□ -1.33
SMC1A-201ENST00000322213 ADAM10O14672 748 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 OR1I1O60431 355 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 HDCP19113 662 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 PTBP1P26599 531 aaKnown RBP eCLIP6.77□□□□□ -1.33
SMC1A-201ENST00000322213 PCGF2P35227 344 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 GALNT2Q10471 571 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 PEA15Q15121 130 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 SYT6Q5T7P8 510 aaPredicted RBP6.77□□□□□ -1.33
SMC1A-201ENST00000322213 LILRA2Q8N149 483 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 TMEM185AQ8NFB2 350 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 OR7G2Q8NG99 324 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 PPTC7Q8NI37 304 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 SLC35G5Q96KT7 338 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 TMEM184CQ9NVA4 438 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 OR10H1Q9Y4A9 318 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 PTGDR2Q9Y5Y4 395 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 LY75O60449 1722 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 OR7A17O14581 309 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 IDUAP35475 653 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 ETV5P41161 510 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 HAAOP46952 286 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 C14orf28Q4W4Y0 310 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 PXKQ7Z7A4 578 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 TCTE3Q8IZS6 198 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 MAPK15Q8TD08 544 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 ST8SIA4Q92187 359 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 TTC9Q92623 222 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 SLC25A46Q96AG3 418 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 NKX6-2Q9C056 277 aaPredicted RBP6.77□□□□□ -1.33
SMC1A-201ENST00000322213 AKIP1Q9NQ31 210 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 PCDHB11Q9Y5F2 797 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 J3QLW9 94 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 LALBAP00709 142 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 RAF1P04049 648 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 ZNF19P17023 458 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 SSR2P43308 183 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 BEND4Q6ZU67 534 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 LRP10Q7Z4F1 713 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 SIAH1Q8IUQ4 282 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 TRAPPC12Q8WVT3 735 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 HOXD1Q9GZZ0 328 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 PIGVQ9NUD9 493 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 NME7Q9Y5B8 376 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 NAV3Q8IVL0 2385 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 A0A0D9SG52 128 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 SMCO3A2RU48 225 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 RCBTB2O95199 551 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 VIPP01282 170 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 CSN2P05814 226 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 PIM1P11309 404 aaPredicted RBP6.77□□□□□ -1.33
SMC1A-201ENST00000322213 NFYAP23511 347 aaPredicted RBP6.77□□□□□ -1.33
SMC1A-201ENST00000322213 CDK6Q00534 326 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 MICAQ29983 383 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 ZNF674Q2M3X9 581 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 TRMT10AQ8TBZ6 339 aaKnown RBP6.77□□□□□ -1.33
SMC1A-201ENST00000322213 EXOSC8Q96B26 276 aaKnown RBP6.77□□□□□ -1.33
SMC1A-201ENST00000322213 PDZD7Q9H5P4 517 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 C8orf33Q9H7E9 229 aaPredicted RBP6.77□□□□□ -1.33
SMC1A-201ENST00000322213 TUBAL3A6NHL2 446 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 CDK2AP1O14519 115 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 TOR1AO14656 332 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 MITFO75030 526 aaPredicted RBP6.77□□□□□ -1.33
SMC1A-201ENST00000322213 EPOP01588 193 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 CSF1P09603 554 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 GJA1P17302 382 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 CD9P21926 228 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 SSTR2P30874 369 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 CEACAM19Q7Z692 300 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 TMCO2Q7Z6W1 182 aaPredicted RBP6.77□□□□□ -1.33
SMC1A-201ENST00000322213 ZNF584Q8IVC4 421 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 CLRN3Q8NCR9 226 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 GRIN3AQ8TCU5 1115 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 LRR1Q96L50 414 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 MRIQ9BWK5 157 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 CD244Q9BZW8 370 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 XYLT2Q9H1B5 865 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 CA5BQ9Y2D0 317 aa6.77□□□□□ -1.33
SMC1A-201ENST00000322213 TXNL1O43396 289 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 LRG1P02750 347 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 SCG5P05408 212 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 BCHEP06276 602 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 CFHP08603 1231 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 CKMT1AP12532 417 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 SH3BP2P78314 561 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 INCA1Q0VD86 236 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 MAD2L1BPQ15013 274 aaPredicted RBP6.76□□□□□ -1.33
SMC1A-201ENST00000322213 LRRC37A5PQ49AS3 106 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 AADACL4Q5VUY2 407 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 ST8SIA2Q92186 375 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 ZNF354BQ96LW1 612 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 SLC30A3Q99726 388 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 OPA3Q9H6K4 179 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 AIG1Q9NVV5 245 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 SPG21Q9NZD8 308 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 FBXL3Q9UKT7 428 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 EMCNQ9ULC0 261 aa6.76□□□□□ -1.33
SMC1A-201ENST00000322213 NDRG2Q9UN36 371 aaKnown RBP6.76□□□□□ -1.33
SMC1A-201ENST00000322213 COPS3Q9UNS2 423 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms