RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 SAMD12Q8N8I0 201 aa12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 WDR48Q8TAF3 677 aa12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 FIBINQ8TAL6 211 aa12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 SNAPC3Q92966 411 aa12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 RFT1Q96AA3 541 aa12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 ECHDC3Q96DC8 303 aa12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 NUS1Q96E22 293 aa12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 IL17FQ96PD4 163 aa12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 F2RL3Q96RI0 385 aa12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 SECISBP2Q96T21 854 aaKnown RBP12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 SYT17Q9BSW7 474 aa12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 SLC19A2O60779 497 aa12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 ZNF821O75541 412 aaPredicted RBP12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 PEPDP12955 493 aa12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 CSNK2A2P19784 350 aaPredicted RBP12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 RPS19P39019 145 aaKnown RBP12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 CENPAP49450 140 aa12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 WDR5P61964 334 aaKnown RBP12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 OTOP2Q7RTS6 562 aa12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 UBQLNLQ8IYU4 475 aa12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 KCNK12Q9HB15 430 aa12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 SIRT5Q9NXA8 310 aa12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 CD8B2A6NJW9 211 aa12.13□□□□□ -0.47
DNMT3A-202ENST00000321117 LEFTY2O00292 366 aa12.13□□□□□ -0.47
DNMT3A-202ENST00000321117 ALPPL2P10696 532 aa12.13□□□□□ -0.47
DNMT3A-202ENST00000321117 CD8BP10966 210 aa12.13□□□□□ -0.47
DNMT3A-202ENST00000321117 ACPPP15309 386 aa12.13□□□□□ -0.47
DNMT3A-202ENST00000321117 RPL4P36578 427 aaKnown RBP12.13□□□□□ -0.47
DNMT3A-202ENST00000321117 TATDN3Q17R31 274 aa12.13□□□□□ -0.47
DNMT3A-202ENST00000321117 OR51G2Q8NGK0 314 aa12.13□□□□□ -0.47
DNMT3A-202ENST00000321117 GNPDA2Q8TDQ7 276 aa12.13□□□□□ -0.47
DNMT3A-202ENST00000321117 TRIM36Q9NQ86 728 aa12.13□□□□□ -0.47
DNMT3A-202ENST00000321117 DMRT3Q9NQL9 472 aa12.13□□□□□ -0.47
DNMT3A-202ENST00000321117 ZNF670-ZNF695F2Z2N8 137 aa12.13□□□□□ -0.47
DNMT3A-202ENST00000321117 FAM227AF5H4B4 570 aa12.13□□□□□ -0.47
DNMT3A-202ENST00000321117 H0YC42 278 aa12.13□□□□□ -0.47
DNMT3A-202ENST00000321117 M0R082 166 aa12.13□□□□□ -0.47
DNMT3A-202ENST00000321117 M0R3H8 397 aa12.13□□□□□ -0.47
DNMT3A-202ENST00000321117 SEMA3DO95025 777 aa12.13□□□□□ -0.47
DNMT3A-202ENST00000321117 KCNK2O95069 426 aa12.13□□□□□ -0.47
DNMT3A-202ENST00000321117 SLC3A1Q07837 685 aa12.13□□□□□ -0.47
DNMT3A-202ENST00000321117 GPR19Q15760 415 aa12.13□□□□□ -0.47
DNMT3A-202ENST00000321117 FXNQ16595 210 aa12.13□□□□□ -0.47
DNMT3A-202ENST00000321117 DTX3Q8N9I9 347 aa12.13□□□□□ -0.47
DNMT3A-202ENST00000321117 OSTF1Q92882 214 aa12.13□□□□□ -0.47
DNMT3A-202ENST00000321117 HYLS1Q96M11 299 aa12.13□□□□□ -0.47
DNMT3A-202ENST00000321117 IFT27Q9BW83 186 aa12.13□□□□□ -0.47
DNMT3A-202ENST00000321117 GON7Q9BXV9 100 aa12.13□□□□□ -0.47
DNMT3A-202ENST00000321117 OR51I1Q9H343 314 aa12.13□□□□□ -0.47
DNMT3A-202ENST00000321117 C5AR2Q9P296 337 aa12.13□□□□□ -0.47
DNMT3A-202ENST00000321117 POLR2AP24928 1970 aaKnown RBP12.13□□□□□ -0.47
DNMT3A-202ENST00000321117 TRBV4-1A0A0J9YWV2 114 aa12.13□□□□□ -0.47
DNMT3A-202ENST00000321117 GLOD5A6NK44 160 aa12.13□□□□□ -0.47
DNMT3A-202ENST00000321117 CA12O43570 354 aa12.13□□□□□ -0.47
DNMT3A-202ENST00000321117 SOD2P04179 222 aa12.13□□□□□ -0.47
DNMT3A-202ENST00000321117 CTSOP43234 321 aaPredicted RBP12.13□□□□□ -0.47
DNMT3A-202ENST00000321117 HTR3AP46098 478 aa12.13□□□□□ -0.47
DNMT3A-202ENST00000321117 KIAA0040Q15053 153 aa12.13□□□□□ -0.47
DNMT3A-202ENST00000321117 TCEA2Q15560 299 aa12.13□□□□□ -0.47
DNMT3A-202ENST00000321117 HDDC2Q7Z4H3 204 aa12.13□□□□□ -0.47
DNMT3A-202ENST00000321117 FAM98AQ8NCA5 519 aaKnown RBP12.13□□□□□ -0.47
DNMT3A-202ENST00000321117 SLC6A16Q9GZN6 736 aa12.13□□□□□ -0.47
DNMT3A-202ENST00000321117 SRRDQ9UH36 339 aa12.13□□□□□ -0.47
DNMT3A-202ENST00000321117 NAALAD2Q9Y3Q0 740 aa12.13□□□□□ -0.47
DNMT3A-202ENST00000321117 H7BY64 318 aa12.12□□□□□ -0.47
DNMT3A-202ENST00000321117 STATHP02808 62 aa12.12□□□□□ -0.47
DNMT3A-202ENST00000321117 SLC10A3P09131 477 aa12.12□□□□□ -0.47
DNMT3A-202ENST00000321117 TYRP14679 529 aa12.12□□□□□ -0.47
DNMT3A-202ENST00000321117 ZFP36L2P47974 494 aaKnown RBP12.12□□□□□ -0.47
DNMT3A-202ENST00000321117 CSNK1DP48730 415 aa12.12□□□□□ -0.47
DNMT3A-202ENST00000321117 PCDH1Q08174 1060 aa12.12□□□□□ -0.47
DNMT3A-202ENST00000321117 C17orf99Q6UX52 265 aa12.12□□□□□ -0.47
DNMT3A-202ENST00000321117 RANBP3LQ86VV4 465 aaPredicted RBP12.12□□□□□ -0.47
DNMT3A-202ENST00000321117 TBC1D20Q96BZ9 403 aa12.12□□□□□ -0.47
DNMT3A-202ENST00000321117 PRAP1Q96NZ9 151 aa12.12□□□□□ -0.47
DNMT3A-202ENST00000321117 FOLH1BQ9HBA9 442 aa12.12□□□□□ -0.47
DNMT3A-202ENST00000321117 MYNNQ9NPC7 610 aa12.12□□□□□ -0.47
DNMT3A-202ENST00000321117 TMEM138Q9NPI0 162 aa12.12□□□□□ -0.47
DNMT3A-202ENST00000321117 WDR81Q562E7 1941 aa12.12□□□□□ -0.47
DNMT3A-202ENST00000321117 ERI3O43414 337 aaKnown RBP12.12□□□□□ -0.47
DNMT3A-202ENST00000321117 GPX5O75715 221 aa12.12□□□□□ -0.47
DNMT3A-202ENST00000321117 ZNF10P21506 573 aaPredicted RBP12.12□□□□□ -0.47
DNMT3A-202ENST00000321117 F8A1P23610 371 aa12.12□□□□□ -0.47
DNMT3A-202ENST00000321117 MPIP34949 423 aa12.12□□□□□ -0.47
DNMT3A-202ENST00000321117 DDOSTP39656 456 aa12.12□□□□□ -0.47
DNMT3A-202ENST00000321117 MAN2A2P49641 1150 aa12.12□□□□□ -0.47
DNMT3A-202ENST00000321117 PFN3P60673 137 aa12.12□□□□□ -0.47
DNMT3A-202ENST00000321117 PITPNAQ00169 270 aa12.12□□□□□ -0.47
DNMT3A-202ENST00000321117 LGALS3BPQ08380 585 aa12.12□□□□□ -0.47
DNMT3A-202ENST00000321117 RD3Q7Z3Z2 195 aa12.12□□□□□ -0.47
DNMT3A-202ENST00000321117 DCUN1D3Q8IWE4 304 aa12.12□□□□□ -0.47
DNMT3A-202ENST00000321117 YIPF7Q8N8F6 280 aa12.12□□□□□ -0.47
DNMT3A-202ENST00000321117 OR7G1Q8NGA0 311 aa12.12□□□□□ -0.47
DNMT3A-202ENST00000321117 OR4C6Q8NH72 309 aa12.12□□□□□ -0.47
DNMT3A-202ENST00000321117 BBS10Q8TAM1 723 aa12.12□□□□□ -0.47
DNMT3A-202ENST00000321117 ERMAPQ96PL5 475 aaPredicted RBP12.12□□□□□ -0.47
DNMT3A-202ENST00000321117 NEDD4LQ96PU5 975 aa12.12□□□□□ -0.47
DNMT3A-202ENST00000321117 CHIAQ9BZP6 476 aa12.12□□□□□ -0.47
DNMT3A-202ENST00000321117 THSD1Q9NS62 852 aa12.12□□□□□ -0.47
DNMT3A-202ENST00000321117 ZSCAN32Q9NX65 697 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms