RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 EXOC3L2Q2M3D2 409 aa13.44□□□□□ -0.26
VRK3-201ENST00000316763 ANKDD1AQ495B1 522 aa13.44□□□□□ -0.26
VRK3-201ENST00000316763 MLIPQ5VWP3 458 aa13.44□□□□□ -0.26
VRK3-201ENST00000316763 REEP3Q6NUK4 255 aa13.44□□□□□ -0.26
VRK3-201ENST00000316763 WASH2PQ6VEQ5 465 aa13.44□□□□□ -0.26
VRK3-201ENST00000316763 AHSA2Q719I0 299 aa13.44□□□□□ -0.26
VRK3-201ENST00000316763 SLCO6A1Q86UG4 719 aa13.44□□□□□ -0.26
VRK3-201ENST00000316763 CCDC71Q8IV32 467 aaPredicted RBP13.44□□□□□ -0.26
VRK3-201ENST00000316763 ZBTB44Q8NCP5 570 aa13.44□□□□□ -0.26
VRK3-201ENST00000316763 S100ZQ8WXG8 99 aa13.44□□□□□ -0.26
VRK3-201ENST00000316763 TSACCQ96A04 125 aaPredicted RBP13.44□□□□□ -0.26
VRK3-201ENST00000316763 MS4A8Q9BY19 250 aa13.44□□□□□ -0.26
VRK3-201ENST00000316763 WDR12Q9GZL7 423 aaKnown RBP13.44□□□□□ -0.26
VRK3-201ENST00000316763 HMG20AQ9NP66 347 aa13.44□□□□□ -0.26
VRK3-201ENST00000316763 WASH6PQ9NQA3 447 aa13.44□□□□□ -0.26
VRK3-201ENST00000316763 RAB23Q9ULC3 237 aa13.44□□□□□ -0.26
VRK3-201ENST00000316763 CFAP20Q9Y6A4 193 aaKnown RBP13.44□□□□□ -0.26
VRK3-201ENST00000316763 PLPP1O14494 284 aa13.43□□□□□ -0.26
VRK3-201ENST00000316763 PDPK1O15530 556 aa13.43□□□□□ -0.26
VRK3-201ENST00000316763 SH3BP5O60239 455 aa13.43□□□□□ -0.26
VRK3-201ENST00000316763 RHCEP18577 417 aa13.43□□□□□ -0.26
VRK3-201ENST00000316763 GRK3P35626 688 aa13.43□□□□□ -0.26
VRK3-201ENST00000316763 XCR1P46094 333 aa13.43□□□□□ -0.26
VRK3-201ENST00000316763 MANFP55145 182 aaKnown RBP13.43□□□□□ -0.26
VRK3-201ENST00000316763 PCBP3P57721 371 aaKnown RBP13.43□□□□□ -0.26
VRK3-201ENST00000316763 DGCR6Q14129 220 aa13.43□□□□□ -0.26
VRK3-201ENST00000316763 OR52J3Q8NH60 311 aa13.43□□□□□ -0.26
VRK3-201ENST00000316763 APH1BQ8WW43 257 aa13.43□□□□□ -0.26
VRK3-201ENST00000316763 NEURL3Q96EH8 262 aa13.43□□□□□ -0.26
VRK3-201ENST00000316763 COX4I2Q96KJ9 171 aa13.43□□□□□ -0.26
VRK3-201ENST00000316763 COPS4Q9BT78 406 aa13.43□□□□□ -0.26
VRK3-201ENST00000316763 SORBS1Q9BX66 1292 aaKnown RBP13.43□□□□□ -0.26
VRK3-201ENST00000316763 DUSP15Q9H1R2 295 aaPredicted RBP13.43□□□□□ -0.26
VRK3-201ENST00000316763 TRNAU1APQ9NX07 287 aaKnown RBP13.43□□□□□ -0.26
VRK3-201ENST00000316763 PCOLCE2Q9UKZ9 415 aa13.43□□□□□ -0.26
VRK3-201ENST00000316763 HCN4Q9Y3Q4 1203 aa13.43□□□□□ -0.26
VRK3-201ENST00000316763 SLCO1B1Q9Y6L6 691 aa13.43□□□□□ -0.26
VRK3-201ENST00000316763 ENPP4Q9Y6X5 453 aa13.43□□□□□ -0.26
VRK3-201ENST00000316763 WDFY4Q6ZS81 3184 aa13.43□□□□□ -0.26
VRK3-201ENST00000316763 FANCMQ8IYD8 2048 aa13.43□□□□□ -0.26
VRK3-201ENST00000316763 SPTY2D1-AS1A0A0U1RR47 76 aa13.43□□□□□ -0.26
VRK3-201ENST00000316763 TRBC2A0A5B9 178 aa13.43□□□□□ -0.26
VRK3-201ENST00000316763 OR2A25A4D2G3 310 aa13.43□□□□□ -0.26
VRK3-201ENST00000316763 CLDN25C9JDP6 229 aa13.43□□□□□ -0.26
VRK3-201ENST00000316763 CCNB2O95067 398 aa13.43□□□□□ -0.26
VRK3-201ENST00000316763 GADD45GO95257 159 aa13.43□□□□□ -0.26
VRK3-201ENST00000316763 VIPP01282 170 aa13.43□□□□□ -0.26
VRK3-201ENST00000316763 IFNW1P05000 195 aa13.43□□□□□ -0.26
VRK3-201ENST00000316763 CD27P26842 260 aa13.43□□□□□ -0.26
VRK3-201ENST00000316763 HMGA2P52926 109 aa13.43□□□□□ -0.26
VRK3-201ENST00000316763 REEP5Q00765 189 aa13.43□□□□□ -0.26
VRK3-201ENST00000316763 KCNC4Q03721 635 aa13.43□□□□□ -0.26
VRK3-201ENST00000316763 PRSS53Q2L4Q9 553 aa13.43□□□□□ -0.26
VRK3-201ENST00000316763 UBE2UQ5VVX9 321 aa13.43□□□□□ -0.26
VRK3-201ENST00000316763 CEACAM20Q6UY09 585 aa13.43□□□□□ -0.26
VRK3-201ENST00000316763 ZNF605Q86T29 641 aa13.43□□□□□ -0.26
VRK3-201ENST00000316763 ADCK1Q86TW2 530 aa13.43□□□□□ -0.26
VRK3-201ENST00000316763 TMCO5AQ8N6Q1 288 aa13.43□□□□□ -0.26
VRK3-201ENST00000316763 RHOXF1Q8NHV9 184 aa13.43□□□□□ -0.26
VRK3-201ENST00000316763 UBE2FQ969M7 185 aa13.43□□□□□ -0.26
VRK3-201ENST00000316763 RGMAQ96B86 450 aa13.43□□□□□ -0.26
VRK3-201ENST00000316763 TM4SF18Q96CE8 201 aa13.43□□□□□ -0.26
VRK3-201ENST00000316763 VMP1Q96GC9 406 aa13.43□□□□□ -0.26
VRK3-201ENST00000316763 C12orf66Q96MD2 445 aa13.43□□□□□ -0.26
VRK3-201ENST00000316763 PSD2Q9BQI7 771 aa13.43□□□□□ -0.26
VRK3-201ENST00000316763 TMEM168Q9H0V1 697 aa13.43□□□□□ -0.26
VRK3-201ENST00000316763 CXorf36Q9H7Y0 433 aa13.43□□□□□ -0.26
VRK3-201ENST00000316763 NEUROD4Q9HD90 331 aa13.43□□□□□ -0.26
VRK3-201ENST00000316763 PRDM8Q9NQV8 689 aa13.43□□□□□ -0.26
VRK3-201ENST00000316763 RHBDL2Q9NX52 303 aa13.43□□□□□ -0.26
VRK3-201ENST00000316763 PSORS1C1Q9UIG5 152 aa13.43□□□□□ -0.26
VRK3-201ENST00000316763 ZNF451Q9Y4E5 1061 aa13.43□□□□□ -0.26
VRK3-201ENST00000316763 PCDHGA2Q9Y5H1 932 aa13.43□□□□□ -0.26
VRK3-201ENST00000316763 DLL1O00548 723 aa13.42□□□□□ -0.26
VRK3-201ENST00000316763 SCAMP1O15126 338 aa13.42□□□□□ -0.26
VRK3-201ENST00000316763 PDE9AO76083 593 aa13.42□□□□□ -0.26
VRK3-201ENST00000316763 MAOBP27338 520 aa13.42□□□□□ -0.26
VRK3-201ENST00000316763 CNR2P34972 360 aa13.42□□□□□ -0.26
VRK3-201ENST00000316763 BSGP35613 385 aa13.42□□□□□ -0.26
VRK3-201ENST00000316763 ALDH9A1P49189 494 aa13.42□□□□□ -0.26
VRK3-201ENST00000316763 CYP4F2P78329 520 aa13.42□□□□□ -0.26
VRK3-201ENST00000316763 ADPRMQ3LIE5 342 aa13.42□□□□□ -0.26
VRK3-201ENST00000316763 SAXO2Q658L1 398 aa13.42□□□□□ -0.26
VRK3-201ENST00000316763 RD3Q7Z3Z2 195 aa13.42□□□□□ -0.26
VRK3-201ENST00000316763 ZBTB46Q86UZ6 589 aa13.42□□□□□ -0.26
VRK3-201ENST00000316763 PHF10Q8WUB8 498 aaKnown RBP13.42□□□□□ -0.26
VRK3-201ENST00000316763 SH3YL1Q96HL8 342 aaPredicted RBP13.42□□□□□ -0.26
VRK3-201ENST00000316763 HSPA12BQ96MM6 686 aa13.42□□□□□ -0.26
VRK3-201ENST00000316763 F2RL3Q96RI0 385 aa13.42□□□□□ -0.26
VRK3-201ENST00000316763 SIGLEC11Q96RL6 698 aa13.42□□□□□ -0.26
VRK3-201ENST00000316763 ITPAQ9BY32 194 aa13.42□□□□□ -0.26
VRK3-201ENST00000316763 MVB12BQ9H7P6 319 aa13.42□□□□□ -0.26
VRK3-201ENST00000316763 A4GALTQ9NPC4 353 aa13.42□□□□□ -0.26
VRK3-201ENST00000316763 ACER3Q9NUN7 267 aa13.42□□□□□ -0.26
VRK3-201ENST00000316763 TMEM184CQ9NVA4 438 aa13.42□□□□□ -0.26
VRK3-201ENST00000316763 IMPAD1Q9NX62 359 aa13.42□□□□□ -0.26
VRK3-201ENST00000316763 TBC1D29Q9UFV1 150 aa13.42□□□□□ -0.26
VRK3-201ENST00000316763 ADAM29Q9UKF5 820 aa13.42□□□□□ -0.26
VRK3-201ENST00000316763 SH3GLB1Q9Y371 365 aa13.42□□□□□ -0.26
VRK3-201ENST00000316763 TNRC6BQ9UPQ9 1833 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms