RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 TAS2R16Q9NYV7 291 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 FBXO9Q9UK97 447 aaPredicted RBP4.55□□□□□ -1.68
PTPN13-201ENST00000316707 A0A1W2PRQ8 180 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 ISM1B1AKI9 464 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 PDHXO00330 501 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 TSC22D2O75157 780 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 GCM2O75603 506 aaPredicted RBP4.55□□□□□ -1.68
PTPN13-201ENST00000316707 CLEC2LP0C7M8 214 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 GAB1Q13480 694 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 GNA13Q14344 377 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 FGFBP1Q14512 234 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 ZNF267Q14586 743 aaPredicted RBP4.55□□□□□ -1.68
PTPN13-201ENST00000316707 TSC22D1Q15714 1073 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 ATAT1Q5SQI0 421 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 SLC27A4Q6P1M0 643 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 MED27Q6P2C8 311 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 TTC16Q8NEE8 873 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 OR4K5Q8NGD3 323 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 OR5M3Q8NGP4 307 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 RPLP0P6Q8NHW5 317 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 LPPQ93052 612 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 UCN3Q969E3 161 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 PARK7Q99497 189 aaKnown RBP4.55□□□□□ -1.68
PTPN13-201ENST00000316707 P2RY13Q9BPV8 354 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 GHITMQ9H3K2 345 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 EXTL2Q9UBQ6 330 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 ATPIF1Q9UII2 106 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 SLC22A14Q9Y267 594 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 MEIS3P2A8K0S8 358 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 TMEM229AB2RXF0 380 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 H7C4K7 107 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 GFYI3L273 518 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 MEN1O00255 615 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 PLOD3O60568 738 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 TBX18O95935 607 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 GASTP01350 101 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 EPORP19235 508 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 RBMS1P29558 406 aaKnown RBP4.55□□□□□ -1.68
PTPN13-201ENST00000316707 HOXC5Q00444 222 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 DYRK1AQ13627 763 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 PDE7AQ13946 482 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 TPRG1Q6ZUI0 275 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 GPR142Q7Z601 462 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 TOMM5Q8N4H5 51 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 OR5T2Q8NGG2 359 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 NFKBIDQ8NI38 313 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 TEX47Q8TBZ9 253 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 CIDECQ96AQ7 238 aaPredicted RBP4.55□□□□□ -1.68
PTPN13-201ENST00000316707 TMEM159Q96B96 161 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 MSANTD3Q96H12 275 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 GFM1Q96RP9 751 aaKnown RBP4.55□□□□□ -1.68
PTPN13-201ENST00000316707 WACQ9BTA9 647 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 FNDC11Q9BVV2 318 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 IFT27Q9BW83 186 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 EBPLQ9BY08 206 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 MRPL9Q9BYD2 267 aaKnown RBP4.55□□□□□ -1.68
PTPN13-201ENST00000316707 C11orf16Q9NQ32 467 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 H3BNC9 293 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 MMP20O60882 483 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 POMCP01189 267 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 TYRP14679 529 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 ATF4P18848 351 aaPredicted RBP4.55□□□□□ -1.68
PTPN13-201ENST00000316707 ITPKAP23677 461 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 MTNR1AP48039 350 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 ZNF81P51508 661 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 GPR176Q14439 515 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 CCDC85BQ15834 202 aaPredicted RBP4.55□□□□□ -1.68
PTPN13-201ENST00000316707 PXDC1Q5TGL8 231 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 AGTRAPQ6RW13 159 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 COMMD7Q86VX2 200 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 MS4A15Q8N5U1 240 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 ATAD1Q8NBU5 361 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 OR4M1Q8NGD0 313 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 RBPMSQ93062 196 aaKnown RBP4.55□□□□□ -1.68
PTPN13-201ENST00000316707 DACT3Q96B18 629 aaPredicted RBP4.55□□□□□ -1.68
PTPN13-201ENST00000316707 ZNF764Q96H86 408 aaPredicted RBP4.55□□□□□ -1.68
PTPN13-201ENST00000316707 ARHGAP9Q9BRR9 750 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 CYSLTR2Q9NS75 346 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 H2AFY2Q9P0M6 372 aaPredicted RBP4.55□□□□□ -1.68
PTPN13-201ENST00000316707 REV1Q9UBZ9 1251 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 PFDN2Q9UHV9 154 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 ZFP37Q9Y6Q3 630 aaPredicted RBP4.55□□□□□ -1.68
PTPN13-201ENST00000316707 MEIKINA0A087WXM9 373 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 TRAV19A0A0A6YYK7 116 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 MTMR11A4FU01 709 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 PGRMC2O15173 223 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 UBL3O95164 117 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 RNF144AP50876 292 aaPredicted RBP4.54□□□□□ -1.68
PTPN13-201ENST00000316707 TAS2R43P59537 309 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 RPS24P62847 133 aaKnown RBP4.54□□□□□ -1.68
PTPN13-201ENST00000316707 PLA1AQ53H76 456 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 SYT14P1Q58G82 188 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 RNF219Q5W0B1 726 aaPredicted RBP4.54□□□□□ -1.68
PTPN13-201ENST00000316707 PGBD2Q6P3X8 592 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 TPGS1Q6ZTW0 290 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 ZNF655Q8N720 491 aaPredicted RBP4.54□□□□□ -1.68
PTPN13-201ENST00000316707 TMIEQ8NEW7 156 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 WDR20Q8TBZ3 569 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 NARFLQ9H6Q4 476 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 SGK2Q9HBY8 427 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms