RNA–Protein interactions for RNA: ENST00000316509.10

VAMP2-201, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP2, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-201ENST00000316509 PCSK6P29122 969 aa13.16□□□□□ -0.3
VAMP2-201ENST00000316509 BUD31P41223 144 aaPredicted RBP13.16□□□□□ -0.3
VAMP2-201ENST00000316509 MAPK11Q15759 364 aa13.16□□□□□ -0.3
VAMP2-201ENST00000316509 TPRG1LQ5T0D9 272 aa13.16□□□□□ -0.3
VAMP2-201ENST00000316509 VN1R4Q7Z5H5 301 aa13.16□□□□□ -0.3
VAMP2-201ENST00000316509 ZNF655Q8N720 491 aaPredicted RBP13.16□□□□□ -0.3
VAMP2-201ENST00000316509 SMYD1Q8NB12 490 aa13.16□□□□□ -0.3
VAMP2-201ENST00000316509 UTP15Q8TED0 518 aaKnown RBP13.16□□□□□ -0.3
VAMP2-201ENST00000316509 DTNBP1Q96EV8 351 aa13.16□□□□□ -0.3
VAMP2-201ENST00000316509 ALPK1Q96QP1 1244 aa13.16□□□□□ -0.3
VAMP2-201ENST00000316509 TMEM121BQ9BXQ6 578 aaPredicted RBP13.16□□□□□ -0.3
VAMP2-201ENST00000316509 ACTR10Q9NZ32 417 aa13.16□□□□□ -0.3
VAMP2-201ENST00000316509 C5AR2Q9P296 337 aa13.16□□□□□ -0.3
VAMP2-201ENST00000316509 SEC14L3Q9UDX4 400 aa13.16□□□□□ -0.3
VAMP2-201ENST00000316509 EBF1Q9UH73 591 aa13.16□□□□□ -0.3
VAMP2-201ENST00000316509 FBXW2Q9UKT8 454 aa13.16□□□□□ -0.3
VAMP2-201ENST00000316509 PCDHGA6Q9Y5G7 932 aa13.16□□□□□ -0.3
VAMP2-201ENST00000316509 A0A0G2JN53 185 aa13.15□□□□□ -0.3
VAMP2-201ENST00000316509 ZNF99A8MXY4 864 aaPredicted RBP13.15□□□□□ -0.3
VAMP2-201ENST00000316509 H3BMQ9 156 aa13.15□□□□□ -0.3
VAMP2-201ENST00000316509 PGRMC2O15173 223 aa13.15□□□□□ -0.3
VAMP2-201ENST00000316509 PPM1DO15297 605 aa13.15□□□□□ -0.3
VAMP2-201ENST00000316509 HTR1AP08908 422 aa13.15□□□□□ -0.3
VAMP2-201ENST00000316509 IFI6P09912 130 aa13.15□□□□□ -0.3
VAMP2-201ENST00000316509 OR12D1P0DN82 309 aa13.15□□□□□ -0.3
VAMP2-201ENST00000316509 UGT2B7P16662 529 aa13.15□□□□□ -0.3
VAMP2-201ENST00000316509 PCMT1P22061 227 aa13.15□□□□□ -0.3
VAMP2-201ENST00000316509 CBLP22681 906 aa13.15□□□□□ -0.3
VAMP2-201ENST00000316509 TLX1P31314 330 aaPredicted RBP13.15□□□□□ -0.3
VAMP2-201ENST00000316509 BLKP51451 505 aa13.15□□□□□ -0.3
VAMP2-201ENST00000316509 BTN3A2P78410 334 aa13.15□□□□□ -0.3
VAMP2-201ENST00000316509 PUM1Q14671 1186 aaKnown RBP eCLIP13.15□□□□□ -0.3
VAMP2-201ENST00000316509 NPTX1Q15818 432 aa13.15□□□□□ -0.3
VAMP2-201ENST00000316509 FIGLAQ6QHK4 219 aa13.15□□□□□ -0.3
VAMP2-201ENST00000316509 PRSS48Q7RTY5 328 aa13.15□□□□□ -0.3
VAMP2-201ENST00000316509 FAM20CQ8IXL6 584 aa13.15□□□□□ -0.3
VAMP2-201ENST00000316509 SUN3Q8TAQ9 357 aa13.15□□□□□ -0.3
VAMP2-201ENST00000316509 CNIH3Q8TBE1 160 aa13.15□□□□□ -0.3
VAMP2-201ENST00000316509 COG8Q96MW5 612 aa13.15□□□□□ -0.3
VAMP2-201ENST00000316509 ZNF681Q96N22 645 aa13.15□□□□□ -0.3
VAMP2-201ENST00000316509 OR2A5Q96R48 311 aa13.15□□□□□ -0.3
VAMP2-201ENST00000316509 LHPPQ9H008 270 aa13.15□□□□□ -0.3
VAMP2-201ENST00000316509 NTMQ9P121 344 aa13.15□□□□□ -0.3
VAMP2-201ENST00000316509 ACAD8Q9UKU7 415 aa13.15□□□□□ -0.3
VAMP2-201ENST00000316509 CDC14AQ9UNH5 594 aa13.15□□□□□ -0.3
VAMP2-201ENST00000316509 MGAT4BQ9UQ53 548 aa13.15□□□□□ -0.3
VAMP2-201ENST00000316509 CA5BQ9Y2D0 317 aa13.15□□□□□ -0.3
VAMP2-201ENST00000316509 NUP214P35658 2090 aaPredicted RBP13.15□□□□□ -0.3
VAMP2-201ENST00000316509 TMEM265A0A087WTH1 108 aa13.15□□□□□ -0.3
VAMP2-201ENST00000316509 DUXAA6NLW8 204 aa13.15□□□□□ -0.3
VAMP2-201ENST00000316509 PTGES3LE9PB15 166 aa13.15□□□□□ -0.3
VAMP2-201ENST00000316509 FAAHO00519 579 aa13.15□□□□□ -0.3
VAMP2-201ENST00000316509 AXIN1O15169 862 aa13.15□□□□□ -0.3
VAMP2-201ENST00000316509 CASC3O15234 703 aaKnown RBP13.15□□□□□ -0.3
VAMP2-201ENST00000316509 ZSCAN9O15535 394 aaPredicted RBP13.15□□□□□ -0.3
VAMP2-201ENST00000316509 RGS10O43665 173 aa13.15□□□□□ -0.3
VAMP2-201ENST00000316509 ERAL1O75616 437 aaKnown RBP13.15□□□□□ -0.3
VAMP2-201ENST00000316509 ADAP00813 363 aa13.15□□□□□ -0.3
VAMP2-201ENST00000316509 NR2F6P10588 404 aa13.15□□□□□ -0.3
VAMP2-201ENST00000316509 CYP4B1P13584 511 aa13.15□□□□□ -0.3
VAMP2-201ENST00000316509 CCNA2P20248 432 aa13.15□□□□□ -0.3
VAMP2-201ENST00000316509 TNFRSF1BP20333 461 aa13.15□□□□□ -0.3
VAMP2-201ENST00000316509 CERS1P27544 350 aa13.15□□□□□ -0.3
VAMP2-201ENST00000316509 SMAD4Q13485 552 aaKnown RBP13.15□□□□□ -0.3
VAMP2-201ENST00000316509 ABHD13Q7L211 337 aa13.15□□□□□ -0.3
VAMP2-201ENST00000316509 P3H2Q8IVL5 708 aa13.15□□□□□ -0.3
VAMP2-201ENST00000316509 GPR32P1Q8NGA4 272 aa13.15□□□□□ -0.3
VAMP2-201ENST00000316509 RHOXF1Q8NHV9 184 aa13.15□□□□□ -0.3
VAMP2-201ENST00000316509 CCL4L1Q8NHW4 92 aa13.15□□□□□ -0.3
VAMP2-201ENST00000316509 HMGB4Q8WW32 186 aa13.15□□□□□ -0.3
VAMP2-201ENST00000316509 XAGE5Q8WWM1 108 aa13.15□□□□□ -0.3
VAMP2-201ENST00000316509 RAB8BQ92930 207 aa13.15□□□□□ -0.3
VAMP2-201ENST00000316509 CNRIP1Q96F85 164 aaPredicted RBP13.15□□□□□ -0.3
VAMP2-201ENST00000316509 TREX2Q9BQ50 279 aaPredicted RBP13.15□□□□□ -0.3
VAMP2-201ENST00000316509 TRIM45Q9H8W5 580 aaPredicted RBP13.15□□□□□ -0.3
VAMP2-201ENST00000316509 GPR27Q9NS67 375 aa13.15□□□□□ -0.3
VAMP2-201ENST00000316509 TRPC4Q9UBN4 977 aa13.15□□□□□ -0.3
VAMP2-201ENST00000316509 PILRAQ9UKJ1 303 aa13.15□□□□□ -0.3
VAMP2-201ENST00000316509 SHISA7A6NL88 538 aa13.14□□□□□ -0.31
VAMP2-201ENST00000316509 C4orf51C9J302 202 aa13.14□□□□□ -0.31
VAMP2-201ENST00000316509 FAM20BO75063 409 aa13.14□□□□□ -0.31
VAMP2-201ENST00000316509 RECKO95980 971 aa13.14□□□□□ -0.31
VAMP2-201ENST00000316509 IGHV4-34P06331 123 aa13.14□□□□□ -0.31
VAMP2-201ENST00000316509 CALRP27797 417 aaKnown RBP13.14□□□□□ -0.31
VAMP2-201ENST00000316509 RAB8AP61006 207 aa13.14□□□□□ -0.31
VAMP2-201ENST00000316509 RPS26P62854 115 aaKnown RBP13.14□□□□□ -0.31
VAMP2-201ENST00000316509 UBE2IP63279 158 aaKnown RBP13.14□□□□□ -0.31
VAMP2-201ENST00000316509 FAM180BQ6P0A1 224 aa13.14□□□□□ -0.31
VAMP2-201ENST00000316509 SYT13Q7L8C5 426 aa13.14□□□□□ -0.31
VAMP2-201ENST00000316509 ANKRD13BQ86YJ7 626 aa13.14□□□□□ -0.31
VAMP2-201ENST00000316509 CCDC116Q8IYX3 515 aa13.14□□□□□ -0.31
VAMP2-201ENST00000316509 TAGAPQ8N103 731 aa13.14□□□□□ -0.31
VAMP2-201ENST00000316509 AVL9Q8NBF6 648 aa13.14□□□□□ -0.31
VAMP2-201ENST00000316509 FCGR1BQ92637 280 aa13.14□□□□□ -0.31
VAMP2-201ENST00000316509 RORBQ92753 470 aa13.14□□□□□ -0.31
VAMP2-201ENST00000316509 UCN3Q969E3 161 aa13.14□□□□□ -0.31
VAMP2-201ENST00000316509 ELP4Q96EB1 424 aa13.14□□□□□ -0.31
VAMP2-201ENST00000316509 SERHL2Q9H4I8 314 aa13.14□□□□□ -0.31
VAMP2-201ENST00000316509 LYRM4Q9HD34 91 aa13.14□□□□□ -0.31
VAMP2-201ENST00000316509 CPNE7Q9UBL6 633 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms