RNA–Protein interactions for RNA: ENST00000316308.8

CLK4-201, Transcript of CDC like kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK4, Length 2,568 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-201ENST00000316308 TBC1D3EA0A087X179 549 aa13.97□□□□□ -0.17
CLK4-201ENST00000316308 TBC1D3KA0A087X1G2 549 aa13.97□□□□□ -0.17
CLK4-201ENST00000316308 TBC1D3FA6NER0 549 aaPredicted RBP13.97□□□□□ -0.17
CLK4-201ENST00000316308 TBC1D3LB9A6J9 549 aa13.97□□□□□ -0.17
CLK4-201ENST00000316308 SLC28A2O43868 658 aa13.97□□□□□ -0.17
CLK4-201ENST00000316308 ADAM23O75077 832 aa13.97□□□□□ -0.17
CLK4-201ENST00000316308 SEMA3DO95025 777 aa13.97□□□□□ -0.17
CLK4-201ENST00000316308 CCNB2O95067 398 aa13.97□□□□□ -0.17
CLK4-201ENST00000316308 TBC1D3HP0C7X1 549 aa13.97□□□□□ -0.17
CLK4-201ENST00000316308 HSMCR30P0CW71 290 aa13.97□□□□□ -0.17
CLK4-201ENST00000316308 ANXA8P13928 327 aa13.97□□□□□ -0.17
CLK4-201ENST00000316308 PTNP21246 168 aa13.97□□□□□ -0.17
CLK4-201ENST00000316308 FRKP42685 505 aaPredicted RBP13.97□□□□□ -0.17
CLK4-201ENST00000316308 RAB28P51157 221 aa13.97□□□□□ -0.17
CLK4-201ENST00000316308 CCR3P51677 355 aa13.97□□□□□ -0.17
CLK4-201ENST00000316308 HMGA2P52926 109 aa13.97□□□□□ -0.17
CLK4-201ENST00000316308 TBC1D3GQ6DHY5 549 aa13.97□□□□□ -0.17
CLK4-201ENST00000316308 TBC1D3CQ6IPX1 549 aa13.97□□□□□ -0.17
CLK4-201ENST00000316308 TBC1D3Q8IZP1 549 aaPredicted RBP13.97□□□□□ -0.17
CLK4-201ENST00000316308 IQCF1Q8N6M8 205 aa13.97□□□□□ -0.17
CLK4-201ENST00000316308 SUN3Q8TAQ9 357 aa13.97□□□□□ -0.17
CLK4-201ENST00000316308 GPA33Q99795 319 aa13.97□□□□□ -0.17
CLK4-201ENST00000316308 FTSJ1Q9UET6 329 aa13.97□□□□□ -0.17
CLK4-201ENST00000316308 DUSP12Q9UNI6 340 aa13.97□□□□□ -0.17
CLK4-201ENST00000316308 APODP05090 189 aa13.96□□□□□ -0.17
CLK4-201ENST00000316308 ADORA3P0DMS8 318 aa13.96□□□□□ -0.17
CLK4-201ENST00000316308 RHCEP18577 417 aa13.96□□□□□ -0.17
CLK4-201ENST00000316308 ELAVL4P26378 380 aaKnown RBP13.96□□□□□ -0.17
CLK4-201ENST00000316308 NCBP2P52298 156 aaKnown RBP eCLIP13.96□□□□□ -0.171e-8■□□□□ 11
CLK4-201ENST00000316308 CD300CQ08708 224 aa13.96□□□□□ -0.17
CLK4-201ENST00000316308 DBPQ10586 325 aaPredicted RBP13.96□□□□□ -0.17
CLK4-201ENST00000316308 SLAMF1Q13291 335 aa13.96□□□□□ -0.17
CLK4-201ENST00000316308 ENPP2Q13822 863 aa13.96□□□□□ -0.17
CLK4-201ENST00000316308 KRT33BQ14525 404 aa13.96□□□□□ -0.17
CLK4-201ENST00000316308 TBC1D25Q3MII6 688 aa13.96□□□□□ -0.17
CLK4-201ENST00000316308 CROCCP3Q8IVE0 287 aa13.96□□□□□ -0.17
CLK4-201ENST00000316308 TAGAPQ8N103 731 aa13.96□□□□□ -0.17
CLK4-201ENST00000316308 KCT2Q8NC54 265 aa13.96□□□□□ -0.17
CLK4-201ENST00000316308 OR4E2Q8NGC2 313 aa13.96□□□□□ -0.17
CLK4-201ENST00000316308 SLC7A13Q8TCU3 470 aa13.96□□□□□ -0.17
CLK4-201ENST00000316308 SLIRPQ9GZT3 109 aaKnown RBP13.96□□□□□ -0.17
CLK4-201ENST00000316308 NKX2-4Q9H2Z4 354 aa13.96□□□□□ -0.17
CLK4-201ENST00000316308 DDX31Q9H8H2 851 aaKnown RBP13.96□□□□□ -0.17
CLK4-201ENST00000316308 AKIP1Q9NQ31 210 aa13.96□□□□□ -0.17
CLK4-201ENST00000316308 ZCCHC3Q9NUD5 404 aaKnown RBP13.96□□□□□ -0.17
CLK4-201ENST00000316308 TBC1D29Q9UFV1 150 aa13.96□□□□□ -0.17
CLK4-201ENST00000316308 APOBEC3BQ9UH17 382 aaKnown RBP13.96□□□□□ -0.17
CLK4-201ENST00000316308 CDK1P06493 297 aa13.96□□□□□ -0.17
CLK4-201ENST00000316308 GPC1P35052 558 aa13.96□□□□□ -0.17
CLK4-201ENST00000316308 SGCGQ13326 291 aa13.96□□□□□ -0.17
CLK4-201ENST00000316308 LASP1Q14847 261 aaKnown RBP13.96□□□□□ -0.17
CLK4-201ENST00000316308 TIGD6Q17RP2 521 aa13.96□□□□□ -0.17
CLK4-201ENST00000316308 UBE2UQ5VVX9 321 aa13.96□□□□□ -0.17
CLK4-201ENST00000316308 FRMPD2BQ6IN97 320 aa13.96□□□□□ -0.17
CLK4-201ENST00000316308 TRUB1Q8WWH5 349 aaKnown RBP13.96□□□□□ -0.17
CLK4-201ENST00000316308 MS4A6EQ96DS6 147 aa13.96□□□□□ -0.17
CLK4-201ENST00000316308 C1QTNF2Q9BXJ5 285 aa13.96□□□□□ -0.17
CLK4-201ENST00000316308 MRPS30Q9NP92 439 aaKnown RBP13.96□□□□□ -0.17
CLK4-201ENST00000316308 EQTNQ9NQ60 294 aa13.96□□□□□ -0.17
CLK4-201ENST00000316308 PRDM7Q9NQW5 492 aa13.96□□□□□ -0.17
CLK4-201ENST00000316308 POLE4Q9NR33 117 aa13.96□□□□□ -0.17
CLK4-201ENST00000316308 FKBP14Q9NWM8 211 aa13.96□□□□□ -0.17
CLK4-201ENST00000316308 REV1Q9UBZ9 1251 aa13.96□□□□□ -0.17
CLK4-201ENST00000316308 KCND3Q9UK17 655 aa13.96□□□□□ -0.17
CLK4-201ENST00000316308 SPTBP11277 2137 aa13.96□□□□□ -0.18
CLK4-201ENST00000316308 LOC100506127A0A0U1RQW1 187 aa13.95□□□□□ -0.18
CLK4-201ENST00000316308 RNGTTO60942 597 aaKnown RBP13.95□□□□□ -0.18
CLK4-201ENST00000316308 CHRM4P08173 479 aa13.95□□□□□ -0.18
CLK4-201ENST00000316308 C5AR1P21730 350 aa13.95□□□□□ -0.18
CLK4-201ENST00000316308 CXCR2P25025 360 aa13.95□□□□□ -0.18
CLK4-201ENST00000316308 PKLRP30613 574 aa13.95□□□□□ -0.18
CLK4-201ENST00000316308 LTB4RQ15722 352 aa13.95□□□□□ -0.18
CLK4-201ENST00000316308 TMEM107Q6UX40 140 aa13.95□□□□□ -0.18
CLK4-201ENST00000316308 PAGE2Q7Z2X7 111 aa13.95□□□□□ -0.18
CLK4-201ENST00000316308 TRIM73Q86UV7 250 aa13.95□□□□□ -0.18
CLK4-201ENST00000316308 C11orf74Q86VG3 221 aa13.95□□□□□ -0.18
CLK4-201ENST00000316308 MFSD4AQ8N468 514 aa13.95□□□□□ -0.18
CLK4-201ENST00000316308 OR2L3Q8NG85 312 aa13.95□□□□□ -0.18
CLK4-201ENST00000316308 A4GALTQ9NPC4 353 aa13.95□□□□□ -0.18
CLK4-201ENST00000316308 FAIMQ9NVQ4 179 aa13.95□□□□□ -0.18
CLK4-201ENST00000316308 EFCAB9A8MZ26 197 aa13.95□□□□□ -0.18
CLK4-201ENST00000316308 MAN2B1O00754 1011 aa13.95□□□□□ -0.18
CLK4-201ENST00000316308 PRICKLE3O43900 615 aaPredicted RBP13.95□□□□□ -0.18
CLK4-201ENST00000316308 OR10H3O60404 316 aa13.95□□□□□ -0.18
CLK4-201ENST00000316308 SULT1C4O75897 302 aa13.95□□□□□ -0.18
CLK4-201ENST00000316308 CRISP1P54107 249 aa13.95□□□□□ -0.18
CLK4-201ENST00000316308 ADPRHP54922 357 aa13.95□□□□□ -0.18
CLK4-201ENST00000316308 RPS3AP61247 264 aaKnown RBP13.95□□□□□ -0.18
CLK4-201ENST00000316308 HOXC5Q00444 222 aa13.95□□□□□ -0.18
CLK4-201ENST00000316308 RPE65Q16518 533 aa13.95□□□□□ -0.18
CLK4-201ENST00000316308 ANKRD54Q6NXT1 300 aa13.95□□□□□ -0.18
CLK4-201ENST00000316308 ACOT4Q8N9L9 421 aa13.95□□□□□ -0.18
CLK4-201ENST00000316308 ZNF675Q8TD23 568 aa13.95□□□□□ -0.18
CLK4-201ENST00000316308 TSACCQ96A04 125 aaPredicted RBP13.95□□□□□ -0.18
CLK4-201ENST00000316308 CENPOQ9BU64 300 aa13.95□□□□□ -0.18
CLK4-201ENST00000316308 ITPAQ9BY32 194 aa13.95□□□□□ -0.18
CLK4-201ENST00000316308 POLMQ9NP87 494 aaPredicted RBP13.95□□□□□ -0.18
CLK4-201ENST00000316308 SLC35C2Q9NQQ7 365 aa13.95□□□□□ -0.18
CLK4-201ENST00000316308 PHPT1Q9NRX4 125 aaPredicted RBP13.95□□□□□ -0.18
CLK4-201ENST00000316308 IMPAD1Q9NX62 359 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms